Protein–RNA interactions for Protein: Q9DCF9

Ssr3, Translocon-associated protein subunit gamma, mousemouse

Predictions only

Length 185 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssr3Q9DCF9 Papd4-205ENSMUST00000225868 3081 ntAPPRIS ALT1 BASIC14.91□□□□□ -0.02
Ssr3Q9DCF9 Gm13509-201ENSMUST00000119733 1308 ntBASIC14.91□□□□□ -0.02
Ssr3Q9DCF9 Clec16a-204ENSMUST00000115824 6244 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
Ssr3Q9DCF9 Clec16a-202ENSMUST00000066345 6244 ntAPPRIS P3 TSL 5 BASIC14.9□□□□□ -0.02
Ssr3Q9DCF9 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
Ssr3Q9DCF9 Tbc1d1-203ENSMUST00000119756 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Ssr3Q9DCF9 Gbp5-201ENSMUST00000090127 3055 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Ssr3Q9DCF9 Xrcc1-205ENSMUST00000205573 2528 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Ssr3Q9DCF9 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC14.9□□□□□ -0.02
Ssr3Q9DCF9 Gm45417-201ENSMUST00000209533 758 ntBASIC14.9□□□□□ -0.02
Ssr3Q9DCF9 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Ssr3Q9DCF9 Fbxl21-201ENSMUST00000045428 1965 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Ssr3Q9DCF9 Pcyt1a-202ENSMUST00000104893 4951 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
Ssr3Q9DCF9 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Ssr3Q9DCF9 Sntb2-201ENSMUST00000047425 3225 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Ssr3Q9DCF9 Sesn1-202ENSMUST00000099931 3809 ntAPPRIS ALT1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Ssr3Q9DCF9 Acsl3-201ENSMUST00000035779 3950 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Ssr3Q9DCF9 Wee1-201ENSMUST00000033326 3419 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Ssr3Q9DCF9 Gclc-201ENSMUST00000034905 3423 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Ssr3Q9DCF9 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
Ssr3Q9DCF9 Rcbtb1-201ENSMUST00000022551 3957 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Ssr3Q9DCF9 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
Ssr3Q9DCF9 2010007H06Rik-202ENSMUST00000186025 4934 ntTSL 2 BASIC14.89□□□□□ -0.03
Ssr3Q9DCF9 Prkab1-202ENSMUST00000111999 2026 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
Ssr3Q9DCF9 Cuedc1-201ENSMUST00000018522 3180 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Ssr3Q9DCF9 Zfp786-201ENSMUST00000058844 3191 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Ssr3Q9DCF9 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Ssr3Q9DCF9 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Ssr3Q9DCF9 Gm42778-201ENSMUST00000199644 553 ntBASIC14.89□□□□□ -0.03
Ssr3Q9DCF9 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC14.89□□□□□ -0.03
Ssr3Q9DCF9 Mesp2-201ENSMUST00000107394 1944 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Ssr3Q9DCF9 Dbx1-201ENSMUST00000032717 2091 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Ssr3Q9DCF9 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Ssr3Q9DCF9 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Ssr3Q9DCF9 Alx4-201ENSMUST00000042078 5253 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Ssr3Q9DCF9 Yes1-205ENSMUST00000202543 2657 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Ssr3Q9DCF9 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Ssr3Q9DCF9 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Ssr3Q9DCF9 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Ssr3Q9DCF9 Epor-201ENSMUST00000006397 1761 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Ssr3Q9DCF9 Gm45212-201ENSMUST00000205831 3403 ntBASIC14.88□□□□□ -0.03
Ssr3Q9DCF9 Gm45605-201ENSMUST00000210265 4269 ntBASIC14.88□□□□□ -0.03
Ssr3Q9DCF9 Klhdc4-201ENSMUST00000045884 2078 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Ssr3Q9DCF9 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Ssr3Q9DCF9 Pde1c-203ENSMUST00000164037 3068 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Ssr3Q9DCF9 Trim62-201ENSMUST00000035667 3752 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Ssr3Q9DCF9 Ambra1-205ENSMUST00000111317 4929 ntTSL 5 BASIC14.88□□□□□ -0.03
Ssr3Q9DCF9 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Ssr3Q9DCF9 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Ssr3Q9DCF9 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Ssr3Q9DCF9 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Ssr3Q9DCF9 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC14.88□□□□□ -0.03
Ssr3Q9DCF9 Cog8-201ENSMUST00000034391 2954 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Ssr3Q9DCF9 Rerg-202ENSMUST00000117919 2262 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Ssr3Q9DCF9 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
Ssr3Q9DCF9 Coro1a-202ENSMUST00000106364 1747 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Ssr3Q9DCF9 BC024978-204ENSMUST00000179391 1748 ntAPPRIS P3 TSL 5 BASIC14.88□□□□□ -0.03
Ssr3Q9DCF9 Rcc1-203ENSMUST00000105951 2326 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
Ssr3Q9DCF9 Alox12-202ENSMUST00000108574 2314 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Ssr3Q9DCF9 Kif21a-201ENSMUST00000067205 6307 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Ssr3Q9DCF9 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Ssr3Q9DCF9 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC14.88□□□□□ -0.03
Ssr3Q9DCF9 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Ssr3Q9DCF9 Rhbg-201ENSMUST00000171887 1937 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Ssr3Q9DCF9 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Ssr3Q9DCF9 Foxp4-202ENSMUST00000113262 3198 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ssr3Q9DCF9 C130074G19Rik-201ENSMUST00000048308 3035 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ssr3Q9DCF9 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC14.87□□□□□ -0.03
Ssr3Q9DCF9 Gm9821-201ENSMUST00000178895 1953 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
Ssr3Q9DCF9 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ssr3Q9DCF9 Nfkb1-201ENSMUST00000029812 4117 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ssr3Q9DCF9 Hist1h2ac-201ENSMUST00000171127 2482 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
Ssr3Q9DCF9 Atp5a1-201ENSMUST00000026495 2471 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ssr3Q9DCF9 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Ssr3Q9DCF9 Npnt-206ENSMUST00000117811 4532 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
Ssr3Q9DCF9 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Ssr3Q9DCF9 Gm28372-201ENSMUST00000188900 1876 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
Ssr3Q9DCF9 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ssr3Q9DCF9 Pitpna-203ENSMUST00000143219 3761 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ssr3Q9DCF9 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ssr3Q9DCF9 Pex1-202ENSMUST00000121291 4555 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
Ssr3Q9DCF9 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
Ssr3Q9DCF9 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Ssr3Q9DCF9 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Ssr3Q9DCF9 Gm29241-201ENSMUST00000189260 1096 ntBASIC14.87□□□□□ -0.03
Ssr3Q9DCF9 Lonp2-201ENSMUST00000034141 2860 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ssr3Q9DCF9 Ptpa-201ENSMUST00000042055 2586 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ssr3Q9DCF9 Ugcg-201ENSMUST00000030074 4012 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ssr3Q9DCF9 Cand2-201ENSMUST00000075995 5474 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ssr3Q9DCF9 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC14.87□□□□□ -0.03
Ssr3Q9DCF9 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ssr3Q9DCF9 Rbck1-201ENSMUST00000028964 2252 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ssr3Q9DCF9 Mapk8ip1-201ENSMUST00000050312 2930 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ssr3Q9DCF9 Cyp46a1-201ENSMUST00000021684 2118 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ssr3Q9DCF9 Dock4-201ENSMUST00000037488 8552 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ssr3Q9DCF9 Asap2-201ENSMUST00000050990 3345 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
Ssr3Q9DCF9 Rflna-201ENSMUST00000036109 1681 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
Ssr3Q9DCF9 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Ssr3Q9DCF9 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Ssr3Q9DCF9 Sbk2-202ENSMUST00000182214 2236 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 26.3 ms