Protein–RNA interactions for Protein: Q9DB34

Chmp2a, Charged multivesicular body protein 2a, mousemouse

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp2aQ9DB34 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Chmp2aQ9DB34 Pde5a-204ENSMUST00000200389 7603 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
Chmp2aQ9DB34 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
Chmp2aQ9DB34 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Chmp2aQ9DB34 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Chmp2aQ9DB34 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Chmp2aQ9DB34 Rasd1-201ENSMUST00000062405 1611 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Chmp2aQ9DB34 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Chmp2aQ9DB34 Gm7292-201ENSMUST00000194706 2527 ntBASIC17.31■□□□□ 0.36
Chmp2aQ9DB34 Isyna1-204ENSMUST00000210005 1914 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
Chmp2aQ9DB34 Uchl5-201ENSMUST00000018333 1845 ntAPPRIS ALT1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Chmp2aQ9DB34 Gm45203-201ENSMUST00000206384 1831 ntBASIC17.31■□□□□ 0.36
Chmp2aQ9DB34 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC17.31■□□□□ 0.36
Chmp2aQ9DB34 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
Chmp2aQ9DB34 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC17.31■□□□□ 0.36
Chmp2aQ9DB34 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Chmp2aQ9DB34 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
Chmp2aQ9DB34 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Chmp2aQ9DB34 Ppdpf-201ENSMUST00000016488 1160 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Chmp2aQ9DB34 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC17.31■□□□□ 0.36
Chmp2aQ9DB34 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Chmp2aQ9DB34 Cenps-201ENSMUST00000030813 1110 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Chmp2aQ9DB34 Nudt1-201ENSMUST00000050205 954 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Chmp2aQ9DB34 Krtap1-5-201ENSMUST00000054532 1041 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
Chmp2aQ9DB34 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Chmp2aQ9DB34 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Chmp2aQ9DB34 Caln1-203ENSMUST00000111288 9327 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Chmp2aQ9DB34 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Chmp2aQ9DB34 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Chmp2aQ9DB34 Il9r-204ENSMUST00000142396 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Chmp2aQ9DB34 Cenpw-201ENSMUST00000099985 1532 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Chmp2aQ9DB34 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Chmp2aQ9DB34 Magi1-202ENSMUST00000089317 7209 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
Chmp2aQ9DB34 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Chmp2aQ9DB34 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
Chmp2aQ9DB34 Nrip1-201ENSMUST00000054178 4529 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Chmp2aQ9DB34 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Chmp2aQ9DB34 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Chmp2aQ9DB34 Kcnq2-201ENSMUST00000016491 3067 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Chmp2aQ9DB34 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Chmp2aQ9DB34 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Chmp2aQ9DB34 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC17.3■□□□□ 0.36
Chmp2aQ9DB34 Nfib-205ENSMUST00000107247 3267 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
Chmp2aQ9DB34 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Chmp2aQ9DB34 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Chmp2aQ9DB34 Naa50-204ENSMUST00000161326 4487 ntAPPRIS ALT1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Chmp2aQ9DB34 Atp5g1-202ENSMUST00000107684 596 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Chmp2aQ9DB34 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC17.3■□□□□ 0.36
Chmp2aQ9DB34 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Chmp2aQ9DB34 Nme3-201ENSMUST00000024978 715 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Chmp2aQ9DB34 Iscu-201ENSMUST00000026937 957 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Chmp2aQ9DB34 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Chmp2aQ9DB34 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Chmp2aQ9DB34 Olfr315-201ENSMUST00000081533 998 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
Chmp2aQ9DB34 Mrpl43-201ENSMUST00000097715 1213 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Chmp2aQ9DB34 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC17.3■□□□□ 0.36
Chmp2aQ9DB34 Casd1-201ENSMUST00000015333 3961 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Chmp2aQ9DB34 Map3k7-201ENSMUST00000037607 5773 ntAPPRIS ALT1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Chmp2aQ9DB34 Eif2ak3-201ENSMUST00000034093 4513 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Chmp2aQ9DB34 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Chmp2aQ9DB34 Fem1b-201ENSMUST00000034775 6785 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Chmp2aQ9DB34 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
Chmp2aQ9DB34 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Chmp2aQ9DB34 Nucb2-201ENSMUST00000032895 1685 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Chmp2aQ9DB34 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Chmp2aQ9DB34 Rasip1-201ENSMUST00000057927 3202 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Chmp2aQ9DB34 Fmnl3-203ENSMUST00000120633 4290 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
Chmp2aQ9DB34 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Chmp2aQ9DB34 Dag1-203ENSMUST00000171412 4415 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Chmp2aQ9DB34 Gm16401-202ENSMUST00000197463 2074 ntBASIC17.29■□□□□ 0.36
Chmp2aQ9DB34 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
Chmp2aQ9DB34 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Chmp2aQ9DB34 Bpnt1-202ENSMUST00000110965 1046 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Chmp2aQ9DB34 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Chmp2aQ9DB34 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Chmp2aQ9DB34 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC17.29■□□□□ 0.36
Chmp2aQ9DB34 Tmem260-201ENSMUST00000111735 5485 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
Chmp2aQ9DB34 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Chmp2aQ9DB34 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Chmp2aQ9DB34 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Chmp2aQ9DB34 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC17.28■□□□□ 0.36
Chmp2aQ9DB34 Gda-201ENSMUST00000087600 5428 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Chmp2aQ9DB34 Rnls-201ENSMUST00000096114 1597 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Chmp2aQ9DB34 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC17.28■□□□□ 0.36
Chmp2aQ9DB34 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Chmp2aQ9DB34 Rdx-202ENSMUST00000061352 1502 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Chmp2aQ9DB34 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Chmp2aQ9DB34 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
Chmp2aQ9DB34 Asnsd1-202ENSMUST00000123519 983 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Chmp2aQ9DB34 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Chmp2aQ9DB34 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Chmp2aQ9DB34 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC17.28■□□□□ 0.36
Chmp2aQ9DB34 Ubr2-202ENSMUST00000113337 7633 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
Chmp2aQ9DB34 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Chmp2aQ9DB34 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
Chmp2aQ9DB34 F830208F22Rik-202ENSMUST00000143732 2891 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Chmp2aQ9DB34 Acvrl1-203ENSMUST00000119063 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Chmp2aQ9DB34 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC17.28■□□□□ 0.36
Chmp2aQ9DB34 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
Chmp2aQ9DB34 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 65.1 ms