Protein–RNA interactions for Protein: Q9D8B3

Chmp4b, Charged multivesicular body protein 4b, mousemouse

Known RBP Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp4bQ9D8B3 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC20.85■□□□□ 0.93
Chmp4bQ9D8B3 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Chmp4bQ9D8B3 Gm26526-201ENSMUST00000181075 2927 ntTSL 5 BASIC20.85■□□□□ 0.93
Chmp4bQ9D8B3 Bmp2k-201ENSMUST00000035635 7387 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Chmp4bQ9D8B3 Slc16a3-202ENSMUST00000100130 2386 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Chmp4bQ9D8B3 Fbxl21-201ENSMUST00000045428 1965 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Chmp4bQ9D8B3 Fbxo17-203ENSMUST00000108279 1563 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Chmp4bQ9D8B3 Tm9sf1-205ENSMUST00000122358 2517 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Chmp4bQ9D8B3 Klf13-201ENSMUST00000063694 6396 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Chmp4bQ9D8B3 Acvr2a-201ENSMUST00000063886 5686 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Chmp4bQ9D8B3 Rgs6-206ENSMUST00000186309 1693 ntAPPRIS P4 TSL 5 BASIC20.84■□□□□ 0.93
Chmp4bQ9D8B3 Tacc1-201ENSMUST00000084030 7788 ntAPPRIS P4 TSL 1 (best) BASIC20.84■□□□□ 0.93
Chmp4bQ9D8B3 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC20.84■□□□□ 0.93
Chmp4bQ9D8B3 Gm26627-201ENSMUST00000181540 1487 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Chmp4bQ9D8B3 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Chmp4bQ9D8B3 Gm7889-201ENSMUST00000185591 958 ntBASIC20.84■□□□□ 0.93
Chmp4bQ9D8B3 Gm10252-201ENSMUST00000209541 832 ntBASIC20.84■□□□□ 0.93
Chmp4bQ9D8B3 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC20.84■□□□□ 0.93
Chmp4bQ9D8B3 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC20.84■□□□□ 0.93
Chmp4bQ9D8B3 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Chmp4bQ9D8B3 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Chmp4bQ9D8B3 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Chmp4bQ9D8B3 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Chmp4bQ9D8B3 Dnajc3-201ENSMUST00000022734 5141 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Chmp4bQ9D8B3 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
Chmp4bQ9D8B3 Zfp264-201ENSMUST00000208656 1563 ntBASIC20.84■□□□□ 0.93
Chmp4bQ9D8B3 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
Chmp4bQ9D8B3 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Chmp4bQ9D8B3 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Chmp4bQ9D8B3 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Chmp4bQ9D8B3 Aipl1-201ENSMUST00000048207 2309 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Chmp4bQ9D8B3 Chmp2b-201ENSMUST00000004965 1838 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Chmp4bQ9D8B3 Tbc1d9-201ENSMUST00000034145 4631 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Chmp4bQ9D8B3 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC20.83■□□□□ 0.93
Chmp4bQ9D8B3 Rasd1-201ENSMUST00000062405 1611 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Chmp4bQ9D8B3 Tmem229a-201ENSMUST00000127247 5157 ntAPPRIS P1 BASIC20.83■□□□□ 0.93
Chmp4bQ9D8B3 Tsc22d2-203ENSMUST00000199164 4659 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
Chmp4bQ9D8B3 Gda-201ENSMUST00000087600 5428 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Chmp4bQ9D8B3 Gm44450-201ENSMUST00000199528 114 ntBASIC20.83■□□□□ 0.93
Chmp4bQ9D8B3 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC20.83■□□□□ 0.93
Chmp4bQ9D8B3 Mrpl14-201ENSMUST00000024734 645 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Chmp4bQ9D8B3 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Chmp4bQ9D8B3 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Chmp4bQ9D8B3 Gas6-201ENSMUST00000033828 2548 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Chmp4bQ9D8B3 C130073E24Rik-201ENSMUST00000210222 6144 ntTSL 5 BASIC20.83■□□□□ 0.92
Chmp4bQ9D8B3 Gm26663-201ENSMUST00000181105 1882 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
Chmp4bQ9D8B3 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Chmp4bQ9D8B3 Rhobtb1-202ENSMUST00000067908 4422 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Chmp4bQ9D8B3 Rdx-202ENSMUST00000061352 1502 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
Chmp4bQ9D8B3 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Chmp4bQ9D8B3 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC20.82■□□□□ 0.92
Chmp4bQ9D8B3 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
Chmp4bQ9D8B3 Nox4-202ENSMUST00000068829 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Chmp4bQ9D8B3 Zfp384-208ENSMUST00000112428 3132 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Chmp4bQ9D8B3 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Chmp4bQ9D8B3 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC20.82■□□□□ 0.92
Chmp4bQ9D8B3 Bcl7c-205ENSMUST00000205977 891 ntTSL 2 BASIC20.82■□□□□ 0.92
Chmp4bQ9D8B3 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
Chmp4bQ9D8B3 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Chmp4bQ9D8B3 Dnaaf3-201ENSMUST00000094897 2224 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Chmp4bQ9D8B3 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC20.82■□□□□ 0.92
Chmp4bQ9D8B3 Camk2d-226ENSMUST00000199300 5524 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Chmp4bQ9D8B3 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Chmp4bQ9D8B3 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Chmp4bQ9D8B3 Rsph3a-201ENSMUST00000097423 2189 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Chmp4bQ9D8B3 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC20.81■□□□□ 0.92
Chmp4bQ9D8B3 Antxr2-201ENSMUST00000031281 5656 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Chmp4bQ9D8B3 H6pd-201ENSMUST00000030830 4745 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
Chmp4bQ9D8B3 Ubxn11-202ENSMUST00000074690 1573 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Chmp4bQ9D8B3 Xpo6-213ENSMUST00000168189 4552 ntAPPRIS ALT1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Chmp4bQ9D8B3 Uchl5-201ENSMUST00000018333 1845 ntAPPRIS ALT1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Chmp4bQ9D8B3 Cnksr2-201ENSMUST00000026750 5738 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Chmp4bQ9D8B3 Gm8668-201ENSMUST00000120559 1447 ntBASIC20.81■□□□□ 0.92
Chmp4bQ9D8B3 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Chmp4bQ9D8B3 Naa50-204ENSMUST00000161326 4487 ntAPPRIS ALT1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Chmp4bQ9D8B3 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC20.81■□□□□ 0.92
Chmp4bQ9D8B3 Gm6433-201ENSMUST00000118634 875 ntBASIC20.81■□□□□ 0.92
Chmp4bQ9D8B3 Znhit2-201ENSMUST00000162726 1281 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
Chmp4bQ9D8B3 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Chmp4bQ9D8B3 AC134329.2-201ENSMUST00000217897 428 ntBASIC20.81■□□□□ 0.92
Chmp4bQ9D8B3 AC122351.1-201ENSMUST00000220467 126 ntBASIC20.81■□□□□ 0.92
Chmp4bQ9D8B3 Nudt8-202ENSMUST00000025802 787 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Chmp4bQ9D8B3 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Chmp4bQ9D8B3 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Chmp4bQ9D8B3 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC20.81■□□□□ 0.92
Chmp4bQ9D8B3 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Chmp4bQ9D8B3 Kcna6-204ENSMUST00000185333 5836 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Chmp4bQ9D8B3 Ormdl3-201ENSMUST00000052919 2184 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Chmp4bQ9D8B3 Ngrn-201ENSMUST00000117989 1317 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Chmp4bQ9D8B3 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Chmp4bQ9D8B3 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Chmp4bQ9D8B3 Dok5-201ENSMUST00000029075 1768 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Chmp4bQ9D8B3 Gm26039-201ENSMUST00000158152 144 ntBASIC20.8■□□□□ 0.92
Chmp4bQ9D8B3 Rpl14-201ENSMUST00000165532 1009 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Chmp4bQ9D8B3 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
Chmp4bQ9D8B3 Gm5091-201ENSMUST00000181658 1179 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Chmp4bQ9D8B3 Gm29707-201ENSMUST00000196325 491 ntBASIC20.8■□□□□ 0.92
Chmp4bQ9D8B3 Angptl8-201ENSMUST00000058777 865 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Chmp4bQ9D8B3 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Chmp4bQ9D8B3 Arhgef11-201ENSMUST00000039476 6776 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Retrieved 100 of 76,532 protein–RNA pairs in 50.9 ms