Protein–RNA interactions for Protein: Q9D6Z1

Nop56, Nucleolar protein 56, mousemouse

Known RBP Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nop56Q9D6Z1 0610010F05Rik-203ENSMUST00000109532 4106 ntAPPRIS P2 TSL 5 BASIC17.16■□□□□ 0.34
Nop56Q9D6Z1 Npffr1-201ENSMUST00000020287 3479 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
Nop56Q9D6Z1 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Nop56Q9D6Z1 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
Nop56Q9D6Z1 Tnip2-202ENSMUST00000087737 1987 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Nop56Q9D6Z1 Slc8b1-202ENSMUST00000076051 2661 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Nop56Q9D6Z1 Mzf1-202ENSMUST00000182087 2197 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Nop56Q9D6Z1 Slc12a5-201ENSMUST00000099092 6028 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Nop56Q9D6Z1 Scin-201ENSMUST00000002640 2995 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Nop56Q9D6Z1 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC17.15■□□□□ 0.34
Nop56Q9D6Z1 Cygb-201ENSMUST00000021166 2331 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Nop56Q9D6Z1 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Nop56Q9D6Z1 Grhl2-203ENSMUST00000161405 1996 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Nop56Q9D6Z1 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
Nop56Q9D6Z1 Mars-206ENSMUST00000171564 2962 ntTSL 5 BASIC17.15■□□□□ 0.34
Nop56Q9D6Z1 Ranbp9-201ENSMUST00000144326 3371 ntAPPRIS P2 TSL 5 BASIC17.15■□□□□ 0.34
Nop56Q9D6Z1 Cops7b-201ENSMUST00000027446 2231 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Nop56Q9D6Z1 2810410L24Rik-202ENSMUST00000155681 2615 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Nop56Q9D6Z1 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC17.15■□□□□ 0.34
Nop56Q9D6Z1 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
Nop56Q9D6Z1 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Nop56Q9D6Z1 Zbtb16-202ENSMUST00000216150 2505 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Nop56Q9D6Z1 Pde8b-201ENSMUST00000022192 2517 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
Nop56Q9D6Z1 Ctsd-202ENSMUST00000151120 2127 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Nop56Q9D6Z1 Ubn1-201ENSMUST00000052449 6455 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Nop56Q9D6Z1 Slc29a4-201ENSMUST00000058418 2789 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Nop56Q9D6Z1 Dab2ip-202ENSMUST00000091010 6455 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Nop56Q9D6Z1 Chd3-201ENSMUST00000092971 6066 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
Nop56Q9D6Z1 Taf6l-212ENSMUST00000177216 2167 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
Nop56Q9D6Z1 Slit1-203ENSMUST00000169141 5673 ntTSL 5 BASIC17.14■□□□□ 0.34
Nop56Q9D6Z1 Mcoln2-202ENSMUST00000098524 2492 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.34
Nop56Q9D6Z1 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Nop56Q9D6Z1 Hip1r-201ENSMUST00000000939 6735 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Nop56Q9D6Z1 Gm44443-201ENSMUST00000204396 5633 ntBASIC17.14■□□□□ 0.33
Nop56Q9D6Z1 Elf2-202ENSMUST00000091144 2366 ntTSL 5 BASIC17.14■□□□□ 0.33
Nop56Q9D6Z1 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Nop56Q9D6Z1 Comp-201ENSMUST00000003659 2416 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Nop56Q9D6Z1 Alkbh1-212ENSMUST00000185301 408 ntBASIC17.14■□□□□ 0.33
Nop56Q9D6Z1 AC122769.4-201ENSMUST00000228166 901 ntBASIC17.14■□□□□ 0.33
Nop56Q9D6Z1 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Nop56Q9D6Z1 Tubgcp4-202ENSMUST00000110657 1992 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Nop56Q9D6Z1 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC17.14■□□□□ 0.33
Nop56Q9D6Z1 Nrg2-203ENSMUST00000115713 3001 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
Nop56Q9D6Z1 Sgpp1-201ENSMUST00000021450 3323 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Nop56Q9D6Z1 Macrod2-201ENSMUST00000043836 3552 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Nop56Q9D6Z1 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Nop56Q9D6Z1 2610301B20Rik-201ENSMUST00000080517 2116 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Nop56Q9D6Z1 Pdk1-201ENSMUST00000006669 5185 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Nop56Q9D6Z1 Tatdn2-202ENSMUST00000113022 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Nop56Q9D6Z1 Taf10-203ENSMUST00000141116 4281 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Nop56Q9D6Z1 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
Nop56Q9D6Z1 Tmem150b-202ENSMUST00000086364 2822 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Nop56Q9D6Z1 Krt83-201ENSMUST00000023718 1756 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Nop56Q9D6Z1 Bicd2-203ENSMUST00000110085 4588 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Nop56Q9D6Z1 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Nop56Q9D6Z1 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Nop56Q9D6Z1 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Nop56Q9D6Z1 Wnt2b-201ENSMUST00000029429 3318 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Nop56Q9D6Z1 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Nop56Q9D6Z1 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Nop56Q9D6Z1 Ace-201ENSMUST00000001963 4906 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Nop56Q9D6Z1 Ankrd23-201ENSMUST00000054665 1964 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Nop56Q9D6Z1 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Nop56Q9D6Z1 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Nop56Q9D6Z1 Tlnrd1-201ENSMUST00000094216 4433 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
Nop56Q9D6Z1 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Nop56Q9D6Z1 Ccdc84-202ENSMUST00000213813 2675 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Nop56Q9D6Z1 Fgfr2-215ENSMUST00000122054 3323 ntAPPRIS P4 TSL 1 (best) BASIC17.13■□□□□ 0.33
Nop56Q9D6Z1 Rgs3-203ENSMUST00000098031 2072 ntAPPRIS ALT1 TSL 5 BASIC17.12■□□□□ 0.33
Nop56Q9D6Z1 Prpf3-207ENSMUST00000161476 2732 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Nop56Q9D6Z1 Fam149b-211ENSMUST00000224930 2716 ntAPPRIS ALT2 BASIC17.12■□□□□ 0.33
Nop56Q9D6Z1 Papd4-205ENSMUST00000225868 3081 ntAPPRIS ALT1 BASIC17.12■□□□□ 0.33
Nop56Q9D6Z1 Ubash3b-201ENSMUST00000044155 6354 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Nop56Q9D6Z1 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
Nop56Q9D6Z1 Mgat1-201ENSMUST00000081794 2976 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Nop56Q9D6Z1 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Nop56Q9D6Z1 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC17.12■□□□□ 0.33
Nop56Q9D6Z1 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Nop56Q9D6Z1 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC17.12■□□□□ 0.33
Nop56Q9D6Z1 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC17.12■□□□□ 0.33
Nop56Q9D6Z1 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Nop56Q9D6Z1 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC17.12■□□□□ 0.33
Nop56Q9D6Z1 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Nop56Q9D6Z1 Cep44-201ENSMUST00000040330 1690 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Nop56Q9D6Z1 Atg4d-201ENSMUST00000065005 5951 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Nop56Q9D6Z1 Adcy1-201ENSMUST00000020706 12259 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
Nop56Q9D6Z1 Capn10-201ENSMUST00000027488 2902 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Nop56Q9D6Z1 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Nop56Q9D6Z1 Ube2j2-201ENSMUST00000024056 3483 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Nop56Q9D6Z1 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC17.12■□□□□ 0.33
Nop56Q9D6Z1 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC17.12■□□□□ 0.33
Nop56Q9D6Z1 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Nop56Q9D6Z1 Patz1-205ENSMUST00000110043 3702 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Nop56Q9D6Z1 Zfp879-203ENSMUST00000109134 2414 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Nop56Q9D6Z1 Zfp879-201ENSMUST00000049625 2408 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Nop56Q9D6Z1 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Nop56Q9D6Z1 C77080-201ENSMUST00000052602 5187 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Nop56Q9D6Z1 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Nop56Q9D6Z1 Kat2a-202ENSMUST00000103118 3046 ntAPPRIS P4 TSL 1 (best) BASIC17.11■□□□□ 0.33
Nop56Q9D6Z1 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 29 ms