Protein–RNA interactions for Protein: Q9CXF7

Chd1l, Chromodomain-helicase-DNA-binding protein 1-like, mousemouse

Predictions only

Length 900 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd1lQ9CXF7 Rab10-201ENSMUST00000021001 3513 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Chd1lQ9CXF7 Cnot11-203ENSMUST00000161515 3482 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Chd1lQ9CXF7 Mesp2-201ENSMUST00000107394 1944 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Chd1lQ9CXF7 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Chd1lQ9CXF7 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC18.81■□□□□ 0.6
Chd1lQ9CXF7 AC166341.7-201ENSMUST00000221698 126 ntBASIC18.81■□□□□ 0.6
Chd1lQ9CXF7 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
Chd1lQ9CXF7 Hs3st5-201ENSMUST00000058738 3078 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Chd1lQ9CXF7 Pwwp2a-201ENSMUST00000061070 3277 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Chd1lQ9CXF7 AC115863.1-201ENSMUST00000214815 1813 ntBASIC18.81■□□□□ 0.6
Chd1lQ9CXF7 Mindy4-203ENSMUST00000204842 2211 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Chd1lQ9CXF7 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Chd1lQ9CXF7 Gm16675-202ENSMUST00000208508 2586 ntTSL 2 BASIC18.81■□□□□ 0.6
Chd1lQ9CXF7 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Chd1lQ9CXF7 Mphosph8-201ENSMUST00000116468 2939 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Chd1lQ9CXF7 B4galt7-201ENSMUST00000064701 2130 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Chd1lQ9CXF7 Dera-201ENSMUST00000087675 1729 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Chd1lQ9CXF7 Adgrb2-204ENSMUST00000106015 4982 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Chd1lQ9CXF7 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Chd1lQ9CXF7 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Chd1lQ9CXF7 Alkbh1-212ENSMUST00000185301 408 ntBASIC18.8■□□□□ 0.6
Chd1lQ9CXF7 Gm5408-201ENSMUST00000197998 747 ntBASIC18.8■□□□□ 0.6
Chd1lQ9CXF7 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
Chd1lQ9CXF7 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Chd1lQ9CXF7 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Chd1lQ9CXF7 Erlec1-201ENSMUST00000073192 2532 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Chd1lQ9CXF7 Slc25a29-201ENSMUST00000021693 1976 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Chd1lQ9CXF7 Pbx4-201ENSMUST00000081503 1560 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
Chd1lQ9CXF7 Sesn1-202ENSMUST00000099931 3809 ntAPPRIS ALT1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Chd1lQ9CXF7 Tes-202ENSMUST00000115467 2440 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Chd1lQ9CXF7 Ep300-201ENSMUST00000068387 9566 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Chd1lQ9CXF7 Gm17200-201ENSMUST00000170214 2022 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Chd1lQ9CXF7 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Chd1lQ9CXF7 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Chd1lQ9CXF7 Ctage5-213ENSMUST00000176464 4434 ntTSL 5 BASIC18.79■□□□□ 0.6
Chd1lQ9CXF7 Ralb-201ENSMUST00000004565 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Chd1lQ9CXF7 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Chd1lQ9CXF7 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
Chd1lQ9CXF7 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Chd1lQ9CXF7 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC18.79■□□□□ 0.6
Chd1lQ9CXF7 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Chd1lQ9CXF7 Gm5874-201ENSMUST00000096101 508 ntBASIC18.79■□□□□ 0.6
Chd1lQ9CXF7 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Chd1lQ9CXF7 Ankrd63-201ENSMUST00000104937 4861 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
Chd1lQ9CXF7 Atxn7-202ENSMUST00000223714 2954 ntAPPRIS ALT2 BASIC18.79■□□□□ 0.6
Chd1lQ9CXF7 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Chd1lQ9CXF7 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Chd1lQ9CXF7 A830018L16Rik-201ENSMUST00000048613 2779 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
Chd1lQ9CXF7 Perp-201ENSMUST00000019998 1952 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Chd1lQ9CXF7 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC18.78■□□□□ 0.6
Chd1lQ9CXF7 Gm10564-201ENSMUST00000097750 3113 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Chd1lQ9CXF7 Tdg-201ENSMUST00000092266 2959 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Chd1lQ9CXF7 Thop1-201ENSMUST00000005057 2832 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Chd1lQ9CXF7 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Chd1lQ9CXF7 Erf-201ENSMUST00000045847 3505 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Chd1lQ9CXF7 Acadvl-202ENSMUST00000102574 2168 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Chd1lQ9CXF7 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Chd1lQ9CXF7 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC18.78■□□□□ 0.6
Chd1lQ9CXF7 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC18.78■□□□□ 0.6
Chd1lQ9CXF7 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC18.78■□□□□ 0.6
Chd1lQ9CXF7 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
Chd1lQ9CXF7 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
Chd1lQ9CXF7 Fip1l1-203ENSMUST00000113535 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Chd1lQ9CXF7 Tmx4-203ENSMUST00000110120 2602 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Chd1lQ9CXF7 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Chd1lQ9CXF7 Map3k7-201ENSMUST00000037607 5773 ntAPPRIS ALT1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Chd1lQ9CXF7 Sik2-201ENSMUST00000041375 3552 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Chd1lQ9CXF7 Fut7-203ENSMUST00000114278 1990 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
Chd1lQ9CXF7 Fut7-201ENSMUST00000041654 1970 ntAPPRIS P3 TSL 5 BASIC18.77■□□□□ 0.6
Chd1lQ9CXF7 Washc1-202ENSMUST00000116556 2887 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Chd1lQ9CXF7 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Chd1lQ9CXF7 Tead3-206ENSMUST00000156862 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Chd1lQ9CXF7 Tfap2c-201ENSMUST00000030391 2838 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Chd1lQ9CXF7 Tpm3-202ENSMUST00000118566 2190 ntTSL 5 BASIC18.77■□□□□ 0.6
Chd1lQ9CXF7 Stxbp3-201ENSMUST00000102621 2419 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Chd1lQ9CXF7 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Chd1lQ9CXF7 Gm26571-201ENSMUST00000181399 666 ntBASIC18.77■□□□□ 0.6
Chd1lQ9CXF7 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC18.77■□□□□ 0.6
Chd1lQ9CXF7 Gm4974-201ENSMUST00000209974 875 ntBASIC18.77■□□□□ 0.6
Chd1lQ9CXF7 Gm4968-201ENSMUST00000071458 858 ntBASIC18.77■□□□□ 0.6
Chd1lQ9CXF7 Pde4b-208ENSMUST00000106911 3020 ntAPPRIS ALT1 TSL 5 BASIC18.77■□□□□ 0.6
Chd1lQ9CXF7 Spdya-204ENSMUST00000167641 1891 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
Chd1lQ9CXF7 St7l-211ENSMUST00000200132 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Chd1lQ9CXF7 Gm13074-201ENSMUST00000124848 2735 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
Chd1lQ9CXF7 Fgf13-201ENSMUST00000033473 2499 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Chd1lQ9CXF7 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.59
Chd1lQ9CXF7 Klc4-201ENSMUST00000003642 2322 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Chd1lQ9CXF7 Ttll5-204ENSMUST00000110220 2655 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
Chd1lQ9CXF7 9430015G10Rik-208ENSMUST00000169550 2660 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.59
Chd1lQ9CXF7 Rnf14-203ENSMUST00000171461 3351 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Chd1lQ9CXF7 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Chd1lQ9CXF7 Hsdl2-201ENSMUST00000030078 2611 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Chd1lQ9CXF7 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC18.76■□□□□ 0.59
Chd1lQ9CXF7 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Chd1lQ9CXF7 Adgra3-201ENSMUST00000030971 4480 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Chd1lQ9CXF7 Pax8-201ENSMUST00000028355 2560 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Chd1lQ9CXF7 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Chd1lQ9CXF7 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Chd1lQ9CXF7 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Chd1lQ9CXF7 Lhfpl3-202ENSMUST00000197992 3115 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 61.2 ms