Protein–RNA interactions for Protein: Q9CWX9

Ddx47, Probable ATP-dependent RNA helicase DDX47, mousemouse

Known RBP Predictions only

Length 455 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx47Q9CWX9 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Ddx47Q9CWX9 Gm19684-201ENSMUST00000173128 1611 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ddx47Q9CWX9 Knl1-201ENSMUST00000028799 5527 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Ddx47Q9CWX9 Ralb-201ENSMUST00000004565 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ddx47Q9CWX9 Kbtbd2-202ENSMUST00000114323 3816 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ddx47Q9CWX9 Tmx4-203ENSMUST00000110120 2602 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ddx47Q9CWX9 Zpbp-201ENSMUST00000020413 4248 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ddx47Q9CWX9 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ddx47Q9CWX9 Gm4756-201ENSMUST00000207585 1716 ntTSL 5 BASIC17.13■□□□□ 0.33
Ddx47Q9CWX9 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ddx47Q9CWX9 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Ddx47Q9CWX9 Ugcg-201ENSMUST00000030074 4012 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ddx47Q9CWX9 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ddx47Q9CWX9 Lrrc14-202ENSMUST00000127208 4849 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ddx47Q9CWX9 Rassf3-201ENSMUST00000026902 3522 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ddx47Q9CWX9 Gm16675-202ENSMUST00000208508 2586 ntTSL 2 BASIC17.12■□□□□ 0.33
Ddx47Q9CWX9 Grin3b-201ENSMUST00000045085 3283 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ddx47Q9CWX9 Myo5b-201ENSMUST00000074157 6745 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ddx47Q9CWX9 Acox1-201ENSMUST00000066587 3987 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ddx47Q9CWX9 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ddx47Q9CWX9 Ctage5-213ENSMUST00000176464 4434 ntTSL 5 BASIC17.12■□□□□ 0.33
Ddx47Q9CWX9 CT010444.2-201ENSMUST00000217877 1629 ntBASIC17.12■□□□□ 0.33
Ddx47Q9CWX9 Tead4-201ENSMUST00000006311 3076 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Ddx47Q9CWX9 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Ddx47Q9CWX9 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Ddx47Q9CWX9 Stxbp3-201ENSMUST00000102621 2419 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ddx47Q9CWX9 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ddx47Q9CWX9 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ddx47Q9CWX9 Fgfr4-201ENSMUST00000005452 3324 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ddx47Q9CWX9 Rnf138-202ENSMUST00000072847 3002 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Ddx47Q9CWX9 Gps1-202ENSMUST00000116305 1827 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ddx47Q9CWX9 Iars2-201ENSMUST00000027921 5471 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ddx47Q9CWX9 Dnajc3-201ENSMUST00000022734 5141 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ddx47Q9CWX9 Gm45560-201ENSMUST00000211492 1472 ntBASIC17.12■□□□□ 0.33
Ddx47Q9CWX9 Perp-201ENSMUST00000019998 1952 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ddx47Q9CWX9 Erlec1-201ENSMUST00000073192 2532 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ddx47Q9CWX9 Rasa2-201ENSMUST00000034984 5813 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ddx47Q9CWX9 Espnl-201ENSMUST00000088904 5445 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ddx47Q9CWX9 Nhlrc4-201ENSMUST00000085027 2142 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ddx47Q9CWX9 Ttll5-204ENSMUST00000110220 2655 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Ddx47Q9CWX9 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Ddx47Q9CWX9 Pi4k2a-201ENSMUST00000066778 3771 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ddx47Q9CWX9 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC17.11■□□□□ 0.33
Ddx47Q9CWX9 Gm15375-201ENSMUST00000119510 849 ntBASIC17.11■□□□□ 0.33
Ddx47Q9CWX9 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Ddx47Q9CWX9 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Ddx47Q9CWX9 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC17.11■□□□□ 0.33
Ddx47Q9CWX9 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC17.11■□□□□ 0.33
Ddx47Q9CWX9 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC17.11■□□□□ 0.33
Ddx47Q9CWX9 Washc1-202ENSMUST00000116556 2887 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ddx47Q9CWX9 Paxbp1-202ENSMUST00000118522 3973 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ddx47Q9CWX9 Mphosph8-201ENSMUST00000116468 2939 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ddx47Q9CWX9 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ddx47Q9CWX9 Tdg-201ENSMUST00000092266 2959 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ddx47Q9CWX9 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC17.11■□□□□ 0.33
Ddx47Q9CWX9 Svip-201ENSMUST00000098414 3053 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ddx47Q9CWX9 Ptpro-203ENSMUST00000167679 5096 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ddx47Q9CWX9 Mbp-206ENSMUST00000102812 2108 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
Ddx47Q9CWX9 Rab10-201ENSMUST00000021001 3513 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ddx47Q9CWX9 I0C0044D17Rik-201ENSMUST00000097964 2264 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ddx47Q9CWX9 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ddx47Q9CWX9 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Ddx47Q9CWX9 Col13a1-203ENSMUST00000105452 3037 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
Ddx47Q9CWX9 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ddx47Q9CWX9 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
Ddx47Q9CWX9 Ccdc166-201ENSMUST00000182172 2584 ntBASIC17.1■□□□□ 0.33
Ddx47Q9CWX9 Oxr1-206ENSMUST00000170127 4251 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Ddx47Q9CWX9 Adam15-202ENSMUST00000074582 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ddx47Q9CWX9 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC17.1■□□□□ 0.33
Ddx47Q9CWX9 Gm42555-201ENSMUST00000199304 1039 ntBASIC17.1■□□□□ 0.33
Ddx47Q9CWX9 AV356131-201ENSMUST00000206201 750 ntBASIC17.1■□□□□ 0.33
Ddx47Q9CWX9 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ddx47Q9CWX9 Tpm4-201ENSMUST00000003575 2128 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ddx47Q9CWX9 Hs3st5-201ENSMUST00000058738 3078 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ddx47Q9CWX9 Lhfpl3-202ENSMUST00000197992 3115 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ddx47Q9CWX9 C130073E24Rik-201ENSMUST00000210222 6144 ntTSL 5 BASIC17.1■□□□□ 0.33
Ddx47Q9CWX9 Fgf13-201ENSMUST00000033473 2499 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ddx47Q9CWX9 Pax8-201ENSMUST00000028355 2560 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ddx47Q9CWX9 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Ddx47Q9CWX9 Gm13074-201ENSMUST00000124848 2735 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Ddx47Q9CWX9 Ppp1r37-201ENSMUST00000058444 3816 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ddx47Q9CWX9 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC17.1■□□□□ 0.33
Ddx47Q9CWX9 A830018L16Rik-201ENSMUST00000048613 2779 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ddx47Q9CWX9 Jade2-202ENSMUST00000109090 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ddx47Q9CWX9 Samd4-204ENSMUST00000125688 1773 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Ddx47Q9CWX9 Ccdc13-202ENSMUST00000135986 2640 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Ddx47Q9CWX9 Cdh2-201ENSMUST00000025166 4843 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ddx47Q9CWX9 Mtx2-201ENSMUST00000028511 2950 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ddx47Q9CWX9 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ddx47Q9CWX9 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Ddx47Q9CWX9 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ddx47Q9CWX9 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Ddx47Q9CWX9 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ddx47Q9CWX9 Rd3-203ENSMUST00000181512 1760 ntTSL 5 BASIC17.09■□□□□ 0.33
Ddx47Q9CWX9 Gda-201ENSMUST00000087600 5428 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ddx47Q9CWX9 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ddx47Q9CWX9 Zfp109-203ENSMUST00000206960 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ddx47Q9CWX9 Hnrnph1-202ENSMUST00000077817 2126 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Ddx47Q9CWX9 Klc4-201ENSMUST00000003642 2322 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ddx47Q9CWX9 9430015G10Rik-208ENSMUST00000169550 2660 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 37.4 ms