Protein–RNA interactions for Protein: Q9CQV4

Retreg3, Reticulophagy regulator 3, mousemouse

Predictions only

Length 466 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Retreg3Q9CQV4 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
Retreg3Q9CQV4 Gpc3-201ENSMUST00000069360 2216 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Retreg3Q9CQV4 Cxcl14-202ENSMUST00000224801 1467 ntBASIC16.67■□□□□ 0.26
Retreg3Q9CQV4 Kcnq2-201ENSMUST00000016491 3067 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Retreg3Q9CQV4 Gatc-201ENSMUST00000139167 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Retreg3Q9CQV4 Ndufs2-202ENSMUST00000111318 1545 ntTSL 5 BASIC16.67■□□□□ 0.26
Retreg3Q9CQV4 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC16.67■□□□□ 0.26
Retreg3Q9CQV4 Gtf2h4-201ENSMUST00000001565 1679 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Retreg3Q9CQV4 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
Retreg3Q9CQV4 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Retreg3Q9CQV4 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC16.67■□□□□ 0.26
Retreg3Q9CQV4 Ak6-201ENSMUST00000022135 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Retreg3Q9CQV4 Hist1h2bm-201ENSMUST00000224651 524 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
Retreg3Q9CQV4 Nme3-201ENSMUST00000024978 715 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Retreg3Q9CQV4 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Retreg3Q9CQV4 Shc1-202ENSMUST00000094378 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Retreg3Q9CQV4 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Retreg3Q9CQV4 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC16.67■□□□□ 0.26
Retreg3Q9CQV4 Tbcb-201ENSMUST00000006254 1416 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Retreg3Q9CQV4 Marveld1-201ENSMUST00000061111 3066 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Retreg3Q9CQV4 Ptgis-201ENSMUST00000018113 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Retreg3Q9CQV4 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Retreg3Q9CQV4 Gm18336-201ENSMUST00000180787 2298 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
Retreg3Q9CQV4 Brd3os-202ENSMUST00000209765 1898 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
Retreg3Q9CQV4 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Retreg3Q9CQV4 Wasf1-202ENSMUST00000105509 2719 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
Retreg3Q9CQV4 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC16.67■□□□□ 0.26
Retreg3Q9CQV4 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Retreg3Q9CQV4 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
Retreg3Q9CQV4 Mybl2-201ENSMUST00000018005 3651 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Retreg3Q9CQV4 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Retreg3Q9CQV4 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Retreg3Q9CQV4 Iqcd-202ENSMUST00000094391 1673 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Retreg3Q9CQV4 Ivns1abp-203ENSMUST00000111887 2783 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Retreg3Q9CQV4 Gm27389-201ENSMUST00000183622 195 ntBASIC16.66■□□□□ 0.26
Retreg3Q9CQV4 Zfp264-201ENSMUST00000208656 1563 ntBASIC16.66■□□□□ 0.26
Retreg3Q9CQV4 Mal-202ENSMUST00000028854 2778 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Retreg3Q9CQV4 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Retreg3Q9CQV4 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC16.66■□□□□ 0.26
Retreg3Q9CQV4 Fbxo36-201ENSMUST00000097672 901 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Retreg3Q9CQV4 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
Retreg3Q9CQV4 Haglr-201ENSMUST00000100000 2085 ntBASIC16.66■□□□□ 0.26
Retreg3Q9CQV4 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Retreg3Q9CQV4 Sgpp1-201ENSMUST00000021450 3323 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Retreg3Q9CQV4 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Retreg3Q9CQV4 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
Retreg3Q9CQV4 Dusp4-201ENSMUST00000033930 2740 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Retreg3Q9CQV4 Nit1-202ENSMUST00000111295 1335 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
Retreg3Q9CQV4 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
Retreg3Q9CQV4 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
Retreg3Q9CQV4 Smurf2-201ENSMUST00000092517 3125 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Retreg3Q9CQV4 Klhl40-201ENSMUST00000098272 2370 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Retreg3Q9CQV4 Madcam1-201ENSMUST00000020554 1436 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Retreg3Q9CQV4 Gm37722-201ENSMUST00000193757 208 ntBASIC16.65■□□□□ 0.26
Retreg3Q9CQV4 4933401J01Rik-201ENSMUST00000193812 1070 ntBASIC16.65■□□□□ 0.26
Retreg3Q9CQV4 Gm18421-201ENSMUST00000204122 625 ntBASIC16.65■□□□□ 0.26
Retreg3Q9CQV4 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Retreg3Q9CQV4 Gm26709-203ENSMUST00000223260 715 ntTSL 5 BASIC16.65■□□□□ 0.26
Retreg3Q9CQV4 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Retreg3Q9CQV4 Mgat1-201ENSMUST00000081794 2976 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Retreg3Q9CQV4 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC16.65■□□□□ 0.26
Retreg3Q9CQV4 Agpat1-201ENSMUST00000037489 2190 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Retreg3Q9CQV4 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
Retreg3Q9CQV4 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Retreg3Q9CQV4 Nfe2-208ENSMUST00000149111 1878 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Retreg3Q9CQV4 Atp5a1-201ENSMUST00000026495 2471 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
Retreg3Q9CQV4 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC16.64■□□□□ 0.25
Retreg3Q9CQV4 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Retreg3Q9CQV4 Pqlc1-202ENSMUST00000091798 1989 ntAPPRIS P3 TSL 5 BASIC16.64■□□□□ 0.25
Retreg3Q9CQV4 Ormdl3-201ENSMUST00000052919 2184 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Retreg3Q9CQV4 Elf2-202ENSMUST00000091144 2366 ntTSL 5 BASIC16.64■□□□□ 0.25
Retreg3Q9CQV4 Abcg5-202ENSMUST00000163375 1613 ntTSL 5 BASIC16.64■□□□□ 0.25
Retreg3Q9CQV4 Hand1-203ENSMUST00000160392 1806 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Retreg3Q9CQV4 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
Retreg3Q9CQV4 Gm26774-201ENSMUST00000181534 2401 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Retreg3Q9CQV4 Gabra5-202ENSMUST00000206382 2607 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
Retreg3Q9CQV4 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC16.64■□□□□ 0.25
Retreg3Q9CQV4 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Retreg3Q9CQV4 Ndufab1-ps-201ENSMUST00000166096 468 ntBASIC16.64■□□□□ 0.25
Retreg3Q9CQV4 Bvht-202ENSMUST00000183087 588 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Retreg3Q9CQV4 Gm10358-201ENSMUST00000212864 1250 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
Retreg3Q9CQV4 Hint2-201ENSMUST00000030192 610 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Retreg3Q9CQV4 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Retreg3Q9CQV4 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Retreg3Q9CQV4 Akt2-214ENSMUST00000167435 2865 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Retreg3Q9CQV4 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Retreg3Q9CQV4 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Retreg3Q9CQV4 Slc44a1-201ENSMUST00000102911 3102 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Retreg3Q9CQV4 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Retreg3Q9CQV4 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Retreg3Q9CQV4 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Retreg3Q9CQV4 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Retreg3Q9CQV4 Nudt4-201ENSMUST00000020217 3210 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Retreg3Q9CQV4 Slc35b2-202ENSMUST00000223987 1766 ntBASIC16.64■□□□□ 0.25
Retreg3Q9CQV4 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Retreg3Q9CQV4 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Retreg3Q9CQV4 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Retreg3Q9CQV4 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Retreg3Q9CQV4 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Retreg3Q9CQV4 9530018F02Rik-201ENSMUST00000219513 2599 ntBASIC16.63■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 21.9 ms