Protein–RNA interactions for Protein: Q99M85

Scrt1, Transcriptional repressor scratch 1, mousemouse

Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scrt1Q99M85 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Scrt1Q99M85 Cd164l2-201ENSMUST00000105910 986 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Scrt1Q99M85 Kctd14-202ENSMUST00000121987 1210 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Scrt1Q99M85 Dgcr6-208ENSMUST00000153123 920 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Scrt1Q99M85 Gm10052-201ENSMUST00000168019 960 ntBASIC14.51□□□□□ -0.09
Scrt1Q99M85 Gm37935-201ENSMUST00000192012 982 ntBASIC14.51□□□□□ -0.09
Scrt1Q99M85 Gm43077-201ENSMUST00000200602 491 ntTSL 3 BASIC14.51□□□□□ -0.09
Scrt1Q99M85 AC122351.1-201ENSMUST00000220467 126 ntBASIC14.51□□□□□ -0.09
Scrt1Q99M85 Gm7729-201ENSMUST00000050143 801 ntBASIC14.51□□□□□ -0.09
Scrt1Q99M85 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Scrt1Q99M85 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC14.51□□□□□ -0.09
Scrt1Q99M85 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
Scrt1Q99M85 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Scrt1Q99M85 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
Scrt1Q99M85 Pcbp4-201ENSMUST00000024260 2035 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Scrt1Q99M85 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Scrt1Q99M85 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Scrt1Q99M85 Bcam-201ENSMUST00000003061 2429 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Scrt1Q99M85 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
Scrt1Q99M85 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Scrt1Q99M85 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
Scrt1Q99M85 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Scrt1Q99M85 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
Scrt1Q99M85 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Scrt1Q99M85 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Scrt1Q99M85 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Scrt1Q99M85 Hsd17b1-201ENSMUST00000019445 1339 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Scrt1Q99M85 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Scrt1Q99M85 Slc7a5-201ENSMUST00000045557 3517 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Scrt1Q99M85 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Scrt1Q99M85 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC14.5□□□□□ -0.09
Scrt1Q99M85 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC14.5□□□□□ -0.09
Scrt1Q99M85 Gmnn-202ENSMUST00000110382 963 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Scrt1Q99M85 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Scrt1Q99M85 Gm5712-201ENSMUST00000199748 1043 ntBASIC14.5□□□□□ -0.09
Scrt1Q99M85 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC14.5□□□□□ -0.09
Scrt1Q99M85 Ptcra-201ENSMUST00000041012 1283 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Scrt1Q99M85 Prdx6-201ENSMUST00000051925 959 ntTSL 2 BASIC14.5□□□□□ -0.09
Scrt1Q99M85 Sftpb-201ENSMUST00000070437 1131 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
Scrt1Q99M85 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC14.5□□□□□ -0.09
Scrt1Q99M85 Gm3468-201ENSMUST00000165193 1955 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
Scrt1Q99M85 Gm2956-201ENSMUST00000177786 1955 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
Scrt1Q99M85 4930474H06Rik-201ENSMUST00000132822 1590 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Scrt1Q99M85 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC14.5□□□□□ -0.09
Scrt1Q99M85 Ptpn5-201ENSMUST00000033142 3145 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Scrt1Q99M85 Fancg-201ENSMUST00000030165 2771 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Scrt1Q99M85 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
Scrt1Q99M85 Gnao1-207ENSMUST00000138659 5526 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Scrt1Q99M85 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
Scrt1Q99M85 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Scrt1Q99M85 Igdcc3-201ENSMUST00000034961 3146 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Scrt1Q99M85 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC14.49□□□□□ -0.09
Scrt1Q99M85 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Scrt1Q99M85 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Scrt1Q99M85 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Scrt1Q99M85 2310009B15Rik-201ENSMUST00000112025 565 ntAPPRIS P1 TSL 2 BASIC14.49□□□□□ -0.09
Scrt1Q99M85 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Scrt1Q99M85 Ssr2-205ENSMUST00000193934 569 ntTSL 3 BASIC14.49□□□□□ -0.09
Scrt1Q99M85 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC14.49□□□□□ -0.09
Scrt1Q99M85 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Scrt1Q99M85 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
Scrt1Q99M85 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Scrt1Q99M85 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
Scrt1Q99M85 AC154855.1-201ENSMUST00000227353 1458 ntBASIC14.49□□□□□ -0.09
Scrt1Q99M85 Arl11-201ENSMUST00000055159 1482 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Scrt1Q99M85 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Scrt1Q99M85 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Scrt1Q99M85 CT010478.1-201ENSMUST00000220747 2787 ntBASIC14.49□□□□□ -0.09
Scrt1Q99M85 Tbcb-201ENSMUST00000006254 1416 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Scrt1Q99M85 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Scrt1Q99M85 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Scrt1Q99M85 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Scrt1Q99M85 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC14.48□□□□□ -0.09
Scrt1Q99M85 Gm37374-201ENSMUST00000194954 1829 ntBASIC14.48□□□□□ -0.09
Scrt1Q99M85 Gm14029-201ENSMUST00000151051 1348 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Scrt1Q99M85 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Scrt1Q99M85 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Scrt1Q99M85 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Scrt1Q99M85 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
Scrt1Q99M85 Gm37519-201ENSMUST00000191687 2210 ntBASIC14.48□□□□□ -0.09
Scrt1Q99M85 1700020A23Rik-202ENSMUST00000110281 521 ntAPPRIS P1 TSL 3 BASIC14.48□□□□□ -0.09
Scrt1Q99M85 Gm15492-201ENSMUST00000156734 606 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Scrt1Q99M85 Upp1-205ENSMUST00000164791 1252 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Scrt1Q99M85 Bag2-203ENSMUST00000187602 378 ntTSL 2 BASIC14.48□□□□□ -0.09
Scrt1Q99M85 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC14.48□□□□□ -0.09
Scrt1Q99M85 AC159301.1-201ENSMUST00000225130 1182 ntBASIC14.48□□□□□ -0.09
Scrt1Q99M85 4931422A03Rik-201ENSMUST00000056170 1037 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Scrt1Q99M85 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Scrt1Q99M85 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
Scrt1Q99M85 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Scrt1Q99M85 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Scrt1Q99M85 Hivep3-201ENSMUST00000084306 2973 ntBASIC14.48□□□□□ -0.09
Scrt1Q99M85 Rhot2-201ENSMUST00000043897 3189 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Scrt1Q99M85 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Scrt1Q99M85 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC14.48□□□□□ -0.09
Scrt1Q99M85 Cd5-201ENSMUST00000025571 2069 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Scrt1Q99M85 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC14.48□□□□□ -0.09
Scrt1Q99M85 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Scrt1Q99M85 Cd302-202ENSMUST00000074606 1354 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Scrt1Q99M85 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 18.4 ms