Protein–RNA interactions for Protein: Q99JR8

Smarcd2, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 2, mousemouse

Known RBP Predictions only

Length 531 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcd2Q99JR8 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Smarcd2Q99JR8 Mfap2-203ENSMUST00000166376 890 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
Smarcd2Q99JR8 Gm27002-201ENSMUST00000182789 620 ntTSL 2 BASIC16.74■□□□□ 0.27
Smarcd2Q99JR8 Timm10b-211ENSMUST00000210350 529 ntAPPRIS ALT2 TSL 2 BASIC16.74■□□□□ 0.27
Smarcd2Q99JR8 AC132104.2-201ENSMUST00000215011 266 ntBASIC16.74■□□□□ 0.27
Smarcd2Q99JR8 Mrpl17-201ENSMUST00000033170 1028 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Smarcd2Q99JR8 Apopt1-201ENSMUST00000040519 1065 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
Smarcd2Q99JR8 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Smarcd2Q99JR8 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC16.74■□□□□ 0.27
Smarcd2Q99JR8 Dtd1-201ENSMUST00000028917 1350 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Smarcd2Q99JR8 Snupn-201ENSMUST00000068856 1391 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Smarcd2Q99JR8 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
Smarcd2Q99JR8 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Smarcd2Q99JR8 Arl11-201ENSMUST00000055159 1482 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Smarcd2Q99JR8 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Smarcd2Q99JR8 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Smarcd2Q99JR8 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Smarcd2Q99JR8 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Smarcd2Q99JR8 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Smarcd2Q99JR8 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
Smarcd2Q99JR8 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Smarcd2Q99JR8 Thap3-202ENSMUST00000105665 832 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Smarcd2Q99JR8 Ccl27a-202ENSMUST00000108032 350 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Smarcd2Q99JR8 Gm12350-201ENSMUST00000121208 462 ntBASIC16.73■□□□□ 0.27
Smarcd2Q99JR8 Ascl2-202ENSMUST00000121862 814 ntAPPRIS ALT2 BASIC16.73■□□□□ 0.27
Smarcd2Q99JR8 Gm37935-201ENSMUST00000192012 982 ntBASIC16.73■□□□□ 0.27
Smarcd2Q99JR8 6430573P05Rik-202ENSMUST00000192648 597 ntTSL 3 BASIC16.73■□□□□ 0.27
Smarcd2Q99JR8 Gm42802-201ENSMUST00000202475 456 ntTSL 2 BASIC16.73■□□□□ 0.27
Smarcd2Q99JR8 Icam4-202ENSMUST00000215077 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Smarcd2Q99JR8 Tbcc-201ENSMUST00000040434 1164 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
Smarcd2Q99JR8 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Smarcd2Q99JR8 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
Smarcd2Q99JR8 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Smarcd2Q99JR8 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Smarcd2Q99JR8 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC16.73■□□□□ 0.27
Smarcd2Q99JR8 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Smarcd2Q99JR8 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
Smarcd2Q99JR8 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC16.73■□□□□ 0.27
Smarcd2Q99JR8 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Smarcd2Q99JR8 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Smarcd2Q99JR8 Rbm3-206ENSMUST00000115621 1338 ntAPPRIS ALT1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Smarcd2Q99JR8 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Smarcd2Q99JR8 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Smarcd2Q99JR8 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Smarcd2Q99JR8 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
Smarcd2Q99JR8 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Smarcd2Q99JR8 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Smarcd2Q99JR8 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC16.72■□□□□ 0.27
Smarcd2Q99JR8 Acp7-201ENSMUST00000040112 1978 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Smarcd2Q99JR8 Dnajc24-201ENSMUST00000102555 1197 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Smarcd2Q99JR8 Fam107b-203ENSMUST00000115053 688 ntAPPRIS P1 TSL 3 BASIC16.72■□□□□ 0.27
Smarcd2Q99JR8 Gm15492-201ENSMUST00000156734 606 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Smarcd2Q99JR8 Timm23-206ENSMUST00000170331 777 ntTSL 3 BASIC16.72■□□□□ 0.27
Smarcd2Q99JR8 H2-Bl-201ENSMUST00000173080 1138 ntAPPRIS P5 TSL 1 (best) BASIC16.72■□□□□ 0.27
Smarcd2Q99JR8 H2-Bl-204ENSMUST00000184502 862 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Smarcd2Q99JR8 Zfp810-203ENSMUST00000215202 822 ntTSL 3 BASIC16.72■□□□□ 0.27
Smarcd2Q99JR8 AC171004.1-201ENSMUST00000221723 664 ntTSL 3 BASIC16.72■□□□□ 0.27
Smarcd2Q99JR8 Ndufb7-201ENSMUST00000036996 623 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Smarcd2Q99JR8 Dnajb8-201ENSMUST00000061866 990 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
Smarcd2Q99JR8 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Smarcd2Q99JR8 Tmem116-203ENSMUST00000094357 1366 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
Smarcd2Q99JR8 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
Smarcd2Q99JR8 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Smarcd2Q99JR8 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC16.72■□□□□ 0.27
Smarcd2Q99JR8 Gm9889-202ENSMUST00000206983 1577 ntBASIC16.72■□□□□ 0.27
Smarcd2Q99JR8 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
Smarcd2Q99JR8 Krt23-201ENSMUST00000006969 1565 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Smarcd2Q99JR8 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Smarcd2Q99JR8 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
Smarcd2Q99JR8 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
Smarcd2Q99JR8 Gm2694-204ENSMUST00000181898 1303 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Smarcd2Q99JR8 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Smarcd2Q99JR8 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Smarcd2Q99JR8 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Smarcd2Q99JR8 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Smarcd2Q99JR8 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Smarcd2Q99JR8 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Smarcd2Q99JR8 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
Smarcd2Q99JR8 Tpt1-201ENSMUST00000110894 1169 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Smarcd2Q99JR8 Crybb1-202ENSMUST00000112375 793 ntAPPRIS P1 TSL 3 BASIC16.71■□□□□ 0.27
Smarcd2Q99JR8 Sardhos-201ENSMUST00000170435 265 ntTSL 3 BASIC16.71■□□□□ 0.27
Smarcd2Q99JR8 Rpsa-ps1-201ENSMUST00000191040 886 ntBASIC16.71■□□□□ 0.27
Smarcd2Q99JR8 Izumo1r-201ENSMUST00000034409 1291 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Smarcd2Q99JR8 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Smarcd2Q99JR8 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Smarcd2Q99JR8 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC16.71■□□□□ 0.27
Smarcd2Q99JR8 Dusp14-205ENSMUST00000164891 1454 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Smarcd2Q99JR8 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Smarcd2Q99JR8 Enah-210ENSMUST00000193074 1971 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
Smarcd2Q99JR8 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
Smarcd2Q99JR8 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.26
Smarcd2Q99JR8 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
Smarcd2Q99JR8 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.26
Smarcd2Q99JR8 St8sia5-201ENSMUST00000075290 1841 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Smarcd2Q99JR8 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Smarcd2Q99JR8 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Smarcd2Q99JR8 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
Smarcd2Q99JR8 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Smarcd2Q99JR8 Zcchc6-207ENSMUST00000225576 2499 ntBASIC16.7■□□□□ 0.26
Smarcd2Q99JR8 Borcs5-201ENSMUST00000062755 1764 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 32.7 ms