Protein–RNA interactions for Protein: Q99J95

Cdk9, Cyclin-dependent kinase 9, mousemouse

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdk9Q99J95 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC16.76■□□□□ 0.27
Cdk9Q99J95 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Cdk9Q99J95 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Cdk9Q99J95 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC16.76■□□□□ 0.27
Cdk9Q99J95 Mtag2-201ENSMUST00000058665 714 ntBASIC16.76■□□□□ 0.27
Cdk9Q99J95 Tpm3-202ENSMUST00000118566 2190 ntTSL 5 BASIC16.76■□□□□ 0.27
Cdk9Q99J95 Tox2-201ENSMUST00000099110 2166 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
Cdk9Q99J95 Acox1-201ENSMUST00000066587 3987 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
Cdk9Q99J95 Mief2-201ENSMUST00000018743 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Cdk9Q99J95 Pou3f2-201ENSMUST00000178174 5587 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
Cdk9Q99J95 Rabl6-201ENSMUST00000058137 3230 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Cdk9Q99J95 Cadps2-202ENSMUST00000069074 3935 ntTSL 5 BASIC16.76■□□□□ 0.27
Cdk9Q99J95 Tjp3-201ENSMUST00000045744 3024 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Cdk9Q99J95 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Cdk9Q99J95 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Cdk9Q99J95 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
Cdk9Q99J95 Cog8-201ENSMUST00000034391 2954 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Cdk9Q99J95 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Cdk9Q99J95 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Cdk9Q99J95 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC16.75■□□□□ 0.27
Cdk9Q99J95 Rasgrp1-207ENSMUST00000178884 5104 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Cdk9Q99J95 Trpv4-203ENSMUST00000112219 2295 ntTSL 5 BASIC16.75■□□□□ 0.27
Cdk9Q99J95 D930048G16Rik-201ENSMUST00000180975 2266 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Cdk9Q99J95 Tmem267-205ENSMUST00000223912 1789 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
Cdk9Q99J95 Disc1-201ENSMUST00000074562 2597 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
Cdk9Q99J95 Disc1-203ENSMUST00000098311 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Cdk9Q99J95 Golga5-201ENSMUST00000021609 3390 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Cdk9Q99J95 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Cdk9Q99J95 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Cdk9Q99J95 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Cdk9Q99J95 Mir6349-201ENSMUST00000184059 97 ntBASIC16.75■□□□□ 0.27
Cdk9Q99J95 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Cdk9Q99J95 Zfp553-201ENSMUST00000056232 3043 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Cdk9Q99J95 Taf10-203ENSMUST00000141116 4281 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Cdk9Q99J95 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Cdk9Q99J95 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
Cdk9Q99J95 Gas2l2-201ENSMUST00000052521 2610 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Cdk9Q99J95 Bard1-201ENSMUST00000027393 5659 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Cdk9Q99J95 Loxl4-205ENSMUST00000171432 2274 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
Cdk9Q99J95 Celf1-206ENSMUST00000111451 4678 ntAPPRIS ALT1 TSL 5 BASIC16.75■□□□□ 0.27
Cdk9Q99J95 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Cdk9Q99J95 Mettl27-204ENSMUST00000111219 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Cdk9Q99J95 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Cdk9Q99J95 Epor-201ENSMUST00000006397 1761 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Cdk9Q99J95 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Cdk9Q99J95 Gm10654-201ENSMUST00000098653 1633 ntBASIC16.74■□□□□ 0.27
Cdk9Q99J95 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC16.74■□□□□ 0.27
Cdk9Q99J95 Arhgef10l-203ENSMUST00000097820 4382 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Cdk9Q99J95 Smpd1-201ENSMUST00000046983 2412 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Cdk9Q99J95 Nap1l4-201ENSMUST00000072727 2285 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Cdk9Q99J95 Gm15847-201ENSMUST00000121417 1065 ntBASIC16.74■□□□□ 0.27
Cdk9Q99J95 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Cdk9Q99J95 Gm27011-201ENSMUST00000182352 972 ntBASIC16.74■□□□□ 0.27
Cdk9Q99J95 Rab3c-203ENSMUST00000224180 967 ntBASIC16.74■□□□□ 0.27
Cdk9Q99J95 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Cdk9Q99J95 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC16.74■□□□□ 0.27
Cdk9Q99J95 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
Cdk9Q99J95 Nkx2-1-201ENSMUST00000001536 2809 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Cdk9Q99J95 Atxn7l2-203ENSMUST00000117784 2387 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Cdk9Q99J95 Mapk8ip1-201ENSMUST00000050312 2930 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
Cdk9Q99J95 Kcnn1-201ENSMUST00000110078 4047 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Cdk9Q99J95 Kcnn1-202ENSMUST00000110081 4045 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
Cdk9Q99J95 Cap1-203ENSMUST00000106257 2768 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Cdk9Q99J95 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC16.74■□□□□ 0.27
Cdk9Q99J95 Gnal-201ENSMUST00000025402 5616 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Cdk9Q99J95 Bmp8b-201ENSMUST00000002457 2940 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Cdk9Q99J95 Tpd52-205ENSMUST00000120143 6317 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Cdk9Q99J95 Slc25a29-201ENSMUST00000021693 1976 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Cdk9Q99J95 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Cdk9Q99J95 Gnas-202ENSMUST00000087871 3903 ntAPPRIS P4 TSL 1 (best) BASIC16.73■□□□□ 0.27
Cdk9Q99J95 Rcc2-201ENSMUST00000038893 3767 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Cdk9Q99J95 Papd4-201ENSMUST00000048702 2990 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Cdk9Q99J95 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Cdk9Q99J95 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC16.73■□□□□ 0.27
Cdk9Q99J95 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC16.73■□□□□ 0.27
Cdk9Q99J95 AC122769.4-201ENSMUST00000228166 901 ntBASIC16.73■□□□□ 0.27
Cdk9Q99J95 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Cdk9Q99J95 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Cdk9Q99J95 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Cdk9Q99J95 Tra2a-201ENSMUST00000031841 1799 ntAPPRIS P3 TSL 5 BASIC16.73■□□□□ 0.27
Cdk9Q99J95 Gtf3c4-204ENSMUST00000171404 7127 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Cdk9Q99J95 St7l-211ENSMUST00000200132 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Cdk9Q99J95 Cyp46a1-201ENSMUST00000021684 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Cdk9Q99J95 Shank3-202ENSMUST00000066545 4702 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Cdk9Q99J95 Nectin2-201ENSMUST00000075447 2735 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
Cdk9Q99J95 Slco3a1-201ENSMUST00000026897 4589 ntAPPRIS P4 TSL 1 (best) BASIC16.73■□□□□ 0.27
Cdk9Q99J95 Dnajb12-201ENSMUST00000020309 2238 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Cdk9Q99J95 Plppr5-201ENSMUST00000039564 4670 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Cdk9Q99J95 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Cdk9Q99J95 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Cdk9Q99J95 Ptbp2-213ENSMUST00000200097 3777 ntAPPRIS ALT1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Cdk9Q99J95 Casp2-201ENSMUST00000031895 3529 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Cdk9Q99J95 Alox12-202ENSMUST00000108574 2314 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Cdk9Q99J95 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC16.72■□□□□ 0.27
Cdk9Q99J95 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC16.72■□□□□ 0.27
Cdk9Q99J95 AC112142.1-201ENSMUST00000228796 918 ntBASIC16.72■□□□□ 0.27
Cdk9Q99J95 Rptor-201ENSMUST00000026671 6594 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Cdk9Q99J95 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Cdk9Q99J95 BC024978-204ENSMUST00000179391 1748 ntAPPRIS P3 TSL 5 BASIC16.72■□□□□ 0.27
Cdk9Q99J95 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 26.5 ms