Protein–RNA interactions for Protein: Q99J36

Thumpd1, THUMP domain-containing protein 1, mousemouse

Known RBP Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Thumpd1Q99J36 Chgb-201ENSMUST00000028826 2740 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Thumpd1Q99J36 BC024978-204ENSMUST00000179391 1748 ntAPPRIS P3 TSL 5 BASIC14.83□□□□□ -0.04
Thumpd1Q99J36 Ehmt2-204ENSMUST00000114033 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Thumpd1Q99J36 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Thumpd1Q99J36 Fiz1-201ENSMUST00000077385 2546 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Thumpd1Q99J36 Nrsn1-204ENSMUST00000167305 1891 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Thumpd1Q99J36 2210016F16Rik-201ENSMUST00000022032 3051 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Thumpd1Q99J36 Adgrb2-205ENSMUST00000106017 5104 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
Thumpd1Q99J36 Fus-203ENSMUST00000106251 5536 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
Thumpd1Q99J36 Tuba1c-201ENSMUST00000058914 1977 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Thumpd1Q99J36 Isg20l2-201ENSMUST00000055984 2893 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Thumpd1Q99J36 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Thumpd1Q99J36 Gm12896-201ENSMUST00000118430 226 ntBASIC14.82□□□□□ -0.04
Thumpd1Q99J36 Lactbl1-201ENSMUST00000178843 2954 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
Thumpd1Q99J36 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC14.82□□□□□ -0.04
Thumpd1Q99J36 Ankrd44-201ENSMUST00000044359 6192 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
Thumpd1Q99J36 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Thumpd1Q99J36 Gm45723-201ENSMUST00000212135 1783 ntTSL 5 BASIC14.82□□□□□ -0.04
Thumpd1Q99J36 Gm26755-201ENSMUST00000180703 2657 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Thumpd1Q99J36 Slc37a4-203ENSMUST00000213388 2344 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Thumpd1Q99J36 Rint1-205ENSMUST00000120869 1886 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Thumpd1Q99J36 Cgn-204ENSMUST00000155485 2361 ntTSL 2 BASIC14.82□□□□□ -0.04
Thumpd1Q99J36 Dsg2-201ENSMUST00000059787 5766 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Thumpd1Q99J36 Kctd15-203ENSMUST00000108070 2409 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Thumpd1Q99J36 Papolb-201ENSMUST00000099400 4239 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
Thumpd1Q99J36 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Thumpd1Q99J36 Rims3-201ENSMUST00000071093 6505 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Thumpd1Q99J36 Dag1-203ENSMUST00000171412 4415 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Thumpd1Q99J36 Dcdc2c-206ENSMUST00000221349 2209 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
Thumpd1Q99J36 Tuba8-201ENSMUST00000032233 2263 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Thumpd1Q99J36 Ltbp1-201ENSMUST00000001927 6671 ntTSL 5 BASIC14.81□□□□□ -0.04
Thumpd1Q99J36 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
Thumpd1Q99J36 Wasf2-201ENSMUST00000084241 5642 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Thumpd1Q99J36 Nr3c2-203ENSMUST00000109912 5675 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Thumpd1Q99J36 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Thumpd1Q99J36 Gm37292-201ENSMUST00000192062 758 ntBASIC14.81□□□□□ -0.04
Thumpd1Q99J36 Gm3807-201ENSMUST00000193520 1168 ntBASIC14.81□□□□□ -0.04
Thumpd1Q99J36 Nfkbid-202ENSMUST00000108175 2000 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Thumpd1Q99J36 G3bp2-204ENSMUST00000169094 2716 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
Thumpd1Q99J36 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Thumpd1Q99J36 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Thumpd1Q99J36 Ubr2-202ENSMUST00000113337 7633 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
Thumpd1Q99J36 Atp8b2-210ENSMUST00000168276 4265 ntAPPRIS P2 TSL 5 BASIC14.81□□□□□ -0.04
Thumpd1Q99J36 Lca5l-202ENSMUST00000113804 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Thumpd1Q99J36 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC14.81□□□□□ -0.04
Thumpd1Q99J36 Ccdc71l-201ENSMUST00000172332 4240 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
Thumpd1Q99J36 Lrig2-207ENSMUST00000199070 5991 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Thumpd1Q99J36 Pcdha3-201ENSMUST00000192503 5332 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Thumpd1Q99J36 Enah-202ENSMUST00000111024 3572 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
Thumpd1Q99J36 Prmt2-202ENSMUST00000099571 2052 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
Thumpd1Q99J36 Mid1-206ENSMUST00000112107 3194 ntTSL 5 BASIC14.8□□□□□ -0.04
Thumpd1Q99J36 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Thumpd1Q99J36 Rnpep-202ENSMUST00000077340 2288 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Thumpd1Q99J36 Ttl-201ENSMUST00000035812 4567 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Thumpd1Q99J36 Zfp668-201ENSMUST00000054415 5768 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Thumpd1Q99J36 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Thumpd1Q99J36 Xrcc1-205ENSMUST00000205573 2528 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Thumpd1Q99J36 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Thumpd1Q99J36 Gm27000-201ENSMUST00000182943 842 ntBASIC14.8□□□□□ -0.04
Thumpd1Q99J36 Gm27405-201ENSMUST00000184201 112 ntBASIC14.8□□□□□ -0.04
Thumpd1Q99J36 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Thumpd1Q99J36 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Thumpd1Q99J36 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Thumpd1Q99J36 Csnk1e-201ENSMUST00000117786 2694 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Thumpd1Q99J36 Rarg-202ENSMUST00000063339 2718 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Thumpd1Q99J36 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Thumpd1Q99J36 Ranbp9-201ENSMUST00000144326 3371 ntAPPRIS P2 TSL 5 BASIC14.8□□□□□ -0.04
Thumpd1Q99J36 Dera-201ENSMUST00000087675 1729 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Thumpd1Q99J36 Tubgcp4-202ENSMUST00000110657 1992 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Thumpd1Q99J36 Dbx1-201ENSMUST00000032717 2091 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Thumpd1Q99J36 Cyp46a1-201ENSMUST00000021684 2118 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Thumpd1Q99J36 Wac-215ENSMUST00000171042 2205 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Thumpd1Q99J36 Adcy3-207ENSMUST00000152065 4728 ntAPPRIS ALT1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Thumpd1Q99J36 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Thumpd1Q99J36 Dpys-201ENSMUST00000022915 2466 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Thumpd1Q99J36 Agk-201ENSMUST00000031977 2531 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Thumpd1Q99J36 Men1-203ENSMUST00000079327 2639 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Thumpd1Q99J36 Six3os1-212ENSMUST00000177220 5601 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Thumpd1Q99J36 Zbtb2-201ENSMUST00000100077 3086 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Thumpd1Q99J36 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Thumpd1Q99J36 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
Thumpd1Q99J36 Wscd1-203ENSMUST00000108511 2866 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
Thumpd1Q99J36 Tmtc4-204ENSMUST00000126867 2952 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
Thumpd1Q99J36 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC14.79□□□□□ -0.04
Thumpd1Q99J36 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Thumpd1Q99J36 Gm19684-201ENSMUST00000173128 1611 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Thumpd1Q99J36 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Thumpd1Q99J36 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Thumpd1Q99J36 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
Thumpd1Q99J36 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC14.79□□□□□ -0.04
Thumpd1Q99J36 F2rl1-201ENSMUST00000022185 2741 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Thumpd1Q99J36 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Thumpd1Q99J36 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Thumpd1Q99J36 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Thumpd1Q99J36 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
Thumpd1Q99J36 Dnajb5-201ENSMUST00000037872 3291 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
Thumpd1Q99J36 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Thumpd1Q99J36 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Thumpd1Q99J36 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Thumpd1Q99J36 Zfp277-202ENSMUST00000069692 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 23.6 ms