Protein–RNA interactions for Protein: Q923P0

Col20a1, Collagen alpha-1(XX) chain, mousemouse

Predictions only

Length 1,320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col20a1Q923P0 Slc39a1-201ENSMUST00000015467 2364 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Col20a1Q923P0 Nagk-201ENSMUST00000037376 1405 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Col20a1Q923P0 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Col20a1Q923P0 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Col20a1Q923P0 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Col20a1Q923P0 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Col20a1Q923P0 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
Col20a1Q923P0 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Col20a1Q923P0 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Col20a1Q923P0 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
Col20a1Q923P0 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Col20a1Q923P0 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC19.55■□□□□ 0.72
Col20a1Q923P0 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Col20a1Q923P0 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
Col20a1Q923P0 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Col20a1Q923P0 Syngr2-206ENSMUST00000177131 935 ntAPPRIS ALT2 TSL 3 BASIC19.54■□□□□ 0.72
Col20a1Q923P0 Gm43347-201ENSMUST00000200226 580 ntBASIC19.54■□□□□ 0.72
Col20a1Q923P0 Hs3st2-202ENSMUST00000206880 1149 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Col20a1Q923P0 Arhgap33-206ENSMUST00000208522 781 ntTSL 3 BASIC19.54■□□□□ 0.72
Col20a1Q923P0 AC153556.1-201ENSMUST00000215135 794 ntTSL 5 BASIC19.54■□□□□ 0.72
Col20a1Q923P0 Eif6-202ENSMUST00000109638 1382 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Col20a1Q923P0 Gm43294-201ENSMUST00000202850 2490 ntBASIC19.54■□□□□ 0.72
Col20a1Q923P0 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Col20a1Q923P0 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC19.54■□□□□ 0.72
Col20a1Q923P0 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Col20a1Q923P0 Efemp2-204ENSMUST00000165485 1557 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Col20a1Q923P0 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Col20a1Q923P0 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
Col20a1Q923P0 B3gnt4-201ENSMUST00000031384 1423 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
Col20a1Q923P0 Slc19a2-204ENSMUST00000169394 894 ntTSL 5 BASIC19.53■□□□□ 0.72
Col20a1Q923P0 Ssr2-205ENSMUST00000193934 569 ntTSL 3 BASIC19.53■□□□□ 0.72
Col20a1Q923P0 Vsig2-201ENSMUST00000002008 1166 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Col20a1Q923P0 4931422A03Rik-201ENSMUST00000056170 1037 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Col20a1Q923P0 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Col20a1Q923P0 Jdp2-202ENSMUST00000171754 1559 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Col20a1Q923P0 Slc25a3-206ENSMUST00000170810 1341 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
Col20a1Q923P0 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Col20a1Q923P0 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Col20a1Q923P0 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Col20a1Q923P0 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Col20a1Q923P0 Gm7935-201ENSMUST00000100555 1278 ntBASIC19.52■□□□□ 0.72
Col20a1Q923P0 Selenoh-201ENSMUST00000102646 783 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.72
Col20a1Q923P0 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC19.52■□□□□ 0.72
Col20a1Q923P0 Selenoh-206ENSMUST00000189988 390 ntTSL 3 BASIC19.52■□□□□ 0.72
Col20a1Q923P0 Gm44454-201ENSMUST00000198541 138 ntBASIC19.52■□□□□ 0.72
Col20a1Q923P0 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Col20a1Q923P0 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Col20a1Q923P0 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Col20a1Q923P0 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Col20a1Q923P0 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Col20a1Q923P0 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC19.52■□□□□ 0.72
Col20a1Q923P0 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Col20a1Q923P0 Ptn-201ENSMUST00000101534 1614 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Col20a1Q923P0 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Col20a1Q923P0 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.71
Col20a1Q923P0 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.71
Col20a1Q923P0 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
Col20a1Q923P0 Tsacc-202ENSMUST00000107556 584 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Col20a1Q923P0 Btn1a1-202ENSMUST00000110434 1077 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Col20a1Q923P0 Gm12644-201ENSMUST00000119935 606 ntBASIC19.51■□□□□ 0.71
Col20a1Q923P0 Gm11729-201ENSMUST00000124901 713 ntTSL 3 BASIC19.51■□□□□ 0.71
Col20a1Q923P0 Atp6v0b-208ENSMUST00000150204 935 ntTSL 5 BASIC19.51■□□□□ 0.71
Col20a1Q923P0 Syne4-208ENSMUST00000176304 1006 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
Col20a1Q923P0 1810026B05Rik-205ENSMUST00000184855 409 ntTSL 3 BASIC19.51■□□□□ 0.71
Col20a1Q923P0 Gm29246-201ENSMUST00000189221 349 ntTSL 3 BASIC19.51■□□□□ 0.71
Col20a1Q923P0 AC159641.1-201ENSMUST00000221117 177 ntTSL 3 BASIC19.51■□□□□ 0.71
Col20a1Q923P0 CT009713.7-201ENSMUST00000224689 571 ntBASIC19.51■□□□□ 0.71
Col20a1Q923P0 Rhoc-201ENSMUST00000002303 1202 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Col20a1Q923P0 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Col20a1Q923P0 Emd-201ENSMUST00000002029 1595 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Col20a1Q923P0 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Col20a1Q923P0 Mettl27-204ENSMUST00000111219 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Col20a1Q923P0 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Col20a1Q923P0 Pisd-201ENSMUST00000061895 2183 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
Col20a1Q923P0 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Col20a1Q923P0 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Col20a1Q923P0 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Col20a1Q923P0 Mamstr-201ENSMUST00000148532 1606 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Col20a1Q923P0 Kptn-201ENSMUST00000006178 1630 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Col20a1Q923P0 Mff-211ENSMUST00000161648 1715 ntTSL 5 BASIC19.51■□□□□ 0.71
Col20a1Q923P0 Hand1-203ENSMUST00000160392 1806 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Col20a1Q923P0 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC19.51■□□□□ 0.71
Col20a1Q923P0 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Col20a1Q923P0 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Col20a1Q923P0 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC19.51■□□□□ 0.71
Col20a1Q923P0 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Col20a1Q923P0 Hpca-203ENSMUST00000116442 1568 ntAPPRIS P1 TSL 3 BASIC19.51■□□□□ 0.71
Col20a1Q923P0 Cldn7-203ENSMUST00000108596 664 ntTSL 3 BASIC19.51■□□□□ 0.71
Col20a1Q923P0 Kxd1-202ENSMUST00000117580 696 ntTSL 5 BASIC19.51■□□□□ 0.71
Col20a1Q923P0 Gm28659-201ENSMUST00000188013 759 ntBASIC19.51■□□□□ 0.71
Col20a1Q923P0 Gm43338-201ENSMUST00000198617 2223 ntBASIC19.5■□□□□ 0.71
Col20a1Q923P0 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
Col20a1Q923P0 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC19.5■□□□□ 0.71
Col20a1Q923P0 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
Col20a1Q923P0 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Col20a1Q923P0 Slc35b2-202ENSMUST00000223987 1766 ntBASIC19.5■□□□□ 0.71
Col20a1Q923P0 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Col20a1Q923P0 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Col20a1Q923P0 Vps72-201ENSMUST00000009102 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Col20a1Q923P0 Ubl7-201ENSMUST00000163329 1364 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
Retrieved 100 of 76,532 protein–RNA pairs in 21.7 ms