Protein–RNA interactions for Protein: Q91XZ9

Pcdhb20, Protocadherin beta 20, mousemouse

Predictions only

Length 799 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb20Q91XZ9 Rad51d-203ENSMUST00000092844 1228 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Pcdhb20Q91XZ9 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
Pcdhb20Q91XZ9 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Pcdhb20Q91XZ9 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Pcdhb20Q91XZ9 Gm43702-201ENSMUST00000198772 2546 ntBASIC16.05■□□□□ 0.16
Pcdhb20Q91XZ9 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Pcdhb20Q91XZ9 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
Pcdhb20Q91XZ9 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Pcdhb20Q91XZ9 Dmap1-201ENSMUST00000102687 1566 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Pcdhb20Q91XZ9 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Pcdhb20Q91XZ9 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Pcdhb20Q91XZ9 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Pcdhb20Q91XZ9 Tpd52-205ENSMUST00000120143 6317 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Pcdhb20Q91XZ9 Krcc1-201ENSMUST00000080949 1393 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Pcdhb20Q91XZ9 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Pcdhb20Q91XZ9 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Pcdhb20Q91XZ9 Adgrb2-204ENSMUST00000106015 4982 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Pcdhb20Q91XZ9 Ndufb11-201ENSMUST00000116621 908 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Pcdhb20Q91XZ9 Gm14859-201ENSMUST00000117752 357 ntBASIC16.04■□□□□ 0.16
Pcdhb20Q91XZ9 Gm11755-201ENSMUST00000144096 891 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Pcdhb20Q91XZ9 Gm6623-201ENSMUST00000173570 544 ntBASIC16.04■□□□□ 0.16
Pcdhb20Q91XZ9 Vmn1r-ps144-201ENSMUST00000177291 939 ntBASIC16.04■□□□□ 0.16
Pcdhb20Q91XZ9 Bvht-202ENSMUST00000183087 588 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Pcdhb20Q91XZ9 Gm42919-201ENSMUST00000197753 1284 ntBASIC16.04■□□□□ 0.16
Pcdhb20Q91XZ9 4933437G19Rik-201ENSMUST00000197910 1178 ntBASIC16.04■□□□□ 0.16
Pcdhb20Q91XZ9 Gm44593-201ENSMUST00000208372 1249 ntTSL 5 BASIC16.04■□□□□ 0.16
Pcdhb20Q91XZ9 Gm19935-201ENSMUST00000209208 979 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Pcdhb20Q91XZ9 Arhgef33-209ENSMUST00000225223 714 ntBASIC16.04■□□□□ 0.16
Pcdhb20Q91XZ9 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
Pcdhb20Q91XZ9 Fam151b-201ENSMUST00000040106 1152 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Pcdhb20Q91XZ9 Gm7367-201ENSMUST00000057611 492 ntBASIC16.04■□□□□ 0.16
Pcdhb20Q91XZ9 Crhbp-201ENSMUST00000045583 1701 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Pcdhb20Q91XZ9 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Pcdhb20Q91XZ9 Gm28590-201ENSMUST00000185679 1609 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Pcdhb20Q91XZ9 AL590614.2-201ENSMUST00000225374 1937 ntBASIC16.04■□□□□ 0.16
Pcdhb20Q91XZ9 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC16.03■□□□□ 0.16
Pcdhb20Q91XZ9 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Pcdhb20Q91XZ9 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
Pcdhb20Q91XZ9 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC16.03■□□□□ 0.16
Pcdhb20Q91XZ9 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Pcdhb20Q91XZ9 Mir770-201ENSMUST00000103252 94 ntBASIC16.03■□□□□ 0.16
Pcdhb20Q91XZ9 Tekt5-202ENSMUST00000115831 1277 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
Pcdhb20Q91XZ9 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Pcdhb20Q91XZ9 Gm11950-201ENSMUST00000121615 838 ntBASIC16.03■□□□□ 0.16
Pcdhb20Q91XZ9 1700041M19Rik-202ENSMUST00000190908 1123 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Pcdhb20Q91XZ9 Gm17808-201ENSMUST00000200859 894 ntBASIC16.03■□□□□ 0.16
Pcdhb20Q91XZ9 CT009495.1-201ENSMUST00000224221 862 ntBASIC16.03■□□□□ 0.16
Pcdhb20Q91XZ9 AC107711.5-202ENSMUST00000226429 702 ntBASIC16.03■□□□□ 0.16
Pcdhb20Q91XZ9 Fam213b-201ENSMUST00000030935 883 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Pcdhb20Q91XZ9 Rnase9-201ENSMUST00000064214 1189 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Pcdhb20Q91XZ9 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Pcdhb20Q91XZ9 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
Pcdhb20Q91XZ9 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Pcdhb20Q91XZ9 Isyna1-204ENSMUST00000210005 1914 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
Pcdhb20Q91XZ9 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Pcdhb20Q91XZ9 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Pcdhb20Q91XZ9 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
Pcdhb20Q91XZ9 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Pcdhb20Q91XZ9 Spats2l-212ENSMUST00000170139 2315 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
Pcdhb20Q91XZ9 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC16.02■□□□□ 0.16
Pcdhb20Q91XZ9 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Pcdhb20Q91XZ9 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Pcdhb20Q91XZ9 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Pcdhb20Q91XZ9 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
Pcdhb20Q91XZ9 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Pcdhb20Q91XZ9 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Pcdhb20Q91XZ9 Gm14776-201ENSMUST00000121029 887 ntBASIC16.02■□□□□ 0.16
Pcdhb20Q91XZ9 2410003L11Rik-202ENSMUST00000145262 642 ntTSL 3 BASIC16.02■□□□□ 0.16
Pcdhb20Q91XZ9 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Pcdhb20Q91XZ9 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Pcdhb20Q91XZ9 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.15
Pcdhb20Q91XZ9 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.15
Pcdhb20Q91XZ9 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Pcdhb20Q91XZ9 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC16.02■□□□□ 0.15
Pcdhb20Q91XZ9 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Pcdhb20Q91XZ9 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.15
Pcdhb20Q91XZ9 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
Pcdhb20Q91XZ9 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
Pcdhb20Q91XZ9 Nit1-202ENSMUST00000111295 1335 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
Pcdhb20Q91XZ9 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Pcdhb20Q91XZ9 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Pcdhb20Q91XZ9 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Pcdhb20Q91XZ9 Gpd1-203ENSMUST00000162194 1515 ntTSL 5 BASIC16.01■□□□□ 0.15
Pcdhb20Q91XZ9 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Pcdhb20Q91XZ9 Gm3468-201ENSMUST00000165193 1955 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
Pcdhb20Q91XZ9 Gm2956-201ENSMUST00000177786 1955 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
Pcdhb20Q91XZ9 Znhit1-203ENSMUST00000111090 698 ntTSL 2 BASIC16.01■□□□□ 0.15
Pcdhb20Q91XZ9 4930483J18Rik-202ENSMUST00000138715 1093 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Pcdhb20Q91XZ9 Srgn-205ENSMUST00000162161 694 ntAPPRIS P1 TSL 3 BASIC16.01■□□□□ 0.15
Pcdhb20Q91XZ9 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC16.01■□□□□ 0.15
Pcdhb20Q91XZ9 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Pcdhb20Q91XZ9 Tctex1d4-201ENSMUST00000062206 990 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Pcdhb20Q91XZ9 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Pcdhb20Q91XZ9 Cryl1-201ENSMUST00000022517 1497 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Pcdhb20Q91XZ9 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Pcdhb20Q91XZ9 Xpo4-209ENSMUST00000174545 8680 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Pcdhb20Q91XZ9 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Pcdhb20Q91XZ9 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Pcdhb20Q91XZ9 Ep300-201ENSMUST00000068387 9566 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Pcdhb20Q91XZ9 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC16■□□□□ 0.15
Retrieved 100 of 76,532 protein–RNA pairs in 33.8 ms