Protein–RNA interactions for Protein: Q91XY5

Pcdhga3, Protocadherin gamma A3, mousemouse

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga3Q91XY5 Klhl29-201ENSMUST00000020958 7041 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Pcdhga3Q91XY5 Ubr2-201ENSMUST00000113335 5691 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Pcdhga3Q91XY5 Bcor-203ENSMUST00000115512 6887 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Pcdhga3Q91XY5 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Pcdhga3Q91XY5 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Pcdhga3Q91XY5 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Pcdhga3Q91XY5 Atxn7l3-202ENSMUST00000107132 3706 ntAPPRIS P4 TSL 5 BASIC14.8□□□□□ -0.04
Pcdhga3Q91XY5 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
Pcdhga3Q91XY5 Antxr2-201ENSMUST00000031281 5656 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Pcdhga3Q91XY5 Syngap1-204ENSMUST00000194598 6011 ntAPPRIS P2 TSL 5 BASIC14.79□□□□□ -0.04
Pcdhga3Q91XY5 Shisa2-201ENSMUST00000053949 3119 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Pcdhga3Q91XY5 Fam214a-202ENSMUST00000170846 4355 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
Pcdhga3Q91XY5 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC14.79□□□□□ -0.04
Pcdhga3Q91XY5 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
Pcdhga3Q91XY5 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
Pcdhga3Q91XY5 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Pcdhga3Q91XY5 AC135963.1-201ENSMUST00000211640 717 ntBASIC14.79□□□□□ -0.04
Pcdhga3Q91XY5 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Pcdhga3Q91XY5 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Pcdhga3Q91XY5 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Pcdhga3Q91XY5 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Pcdhga3Q91XY5 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Pcdhga3Q91XY5 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Pcdhga3Q91XY5 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
Pcdhga3Q91XY5 Ltbp1-201ENSMUST00000001927 6671 ntTSL 5 BASIC14.78□□□□□ -0.04
Pcdhga3Q91XY5 Itgb4-201ENSMUST00000021107 6014 ntAPPRIS P2 TSL 5 BASIC14.78□□□□□ -0.04
Pcdhga3Q91XY5 Vstm5-201ENSMUST00000034413 1991 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Pcdhga3Q91XY5 Dennd4b-202ENSMUST00000129564 5647 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
Pcdhga3Q91XY5 Enoph1-202ENSMUST00000169390 1833 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Pcdhga3Q91XY5 Gda-201ENSMUST00000087600 5428 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Pcdhga3Q91XY5 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Pcdhga3Q91XY5 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Pcdhga3Q91XY5 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC14.78□□□□□ -0.04
Pcdhga3Q91XY5 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Pcdhga3Q91XY5 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC14.78□□□□□ -0.04
Pcdhga3Q91XY5 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC14.78□□□□□ -0.04
Pcdhga3Q91XY5 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
Pcdhga3Q91XY5 Gm5417-201ENSMUST00000079706 384 ntBASIC14.78□□□□□ -0.04
Pcdhga3Q91XY5 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Pcdhga3Q91XY5 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Pcdhga3Q91XY5 Brpf1-202ENSMUST00000113119 4826 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Pcdhga3Q91XY5 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Pcdhga3Q91XY5 Disp3-201ENSMUST00000047720 5282 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
Pcdhga3Q91XY5 Haglr-201ENSMUST00000100000 2085 ntBASIC14.78□□□□□ -0.04
Pcdhga3Q91XY5 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Pcdhga3Q91XY5 Atp6v0a1-203ENSMUST00000103110 2716 ntTSL 5 BASIC14.78□□□□□ -0.04
Pcdhga3Q91XY5 Ube2j2-201ENSMUST00000024056 3483 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Pcdhga3Q91XY5 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Pcdhga3Q91XY5 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Pcdhga3Q91XY5 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Pcdhga3Q91XY5 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Pcdhga3Q91XY5 Nfkbie-201ENSMUST00000024742 2422 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Pcdhga3Q91XY5 Phf1-201ENSMUST00000073724 2429 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Pcdhga3Q91XY5 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Pcdhga3Q91XY5 Lca5l-202ENSMUST00000113804 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Pcdhga3Q91XY5 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Pcdhga3Q91XY5 Ran-201ENSMUST00000031383 2377 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Pcdhga3Q91XY5 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC14.77□□□□□ -0.04
Pcdhga3Q91XY5 Gm11841-201ENSMUST00000117060 1963 ntBASIC14.77□□□□□ -0.04
Pcdhga3Q91XY5 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC14.77□□□□□ -0.05
Pcdhga3Q91XY5 Gm7791-201ENSMUST00000219066 539 ntBASIC14.77□□□□□ -0.05
Pcdhga3Q91XY5 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Pcdhga3Q91XY5 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.05
Pcdhga3Q91XY5 Rap1gap-202ENSMUST00000097837 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Pcdhga3Q91XY5 Anks1-201ENSMUST00000025058 6844 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Pcdhga3Q91XY5 Gm1043-204ENSMUST00000207866 4296 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.05
Pcdhga3Q91XY5 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Pcdhga3Q91XY5 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Pcdhga3Q91XY5 Nes-201ENSMUST00000090973 6126 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Pcdhga3Q91XY5 Foxc2-201ENSMUST00000054691 2725 ntAPPRIS P1 BASIC14.77□□□□□ -0.05
Pcdhga3Q91XY5 Arhgef12-202ENSMUST00000165665 10752 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Pcdhga3Q91XY5 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.05
Pcdhga3Q91XY5 Dsg2-202ENSMUST00000120102 3590 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Pcdhga3Q91XY5 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Pcdhga3Q91XY5 Cep104-201ENSMUST00000047497 5151 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Pcdhga3Q91XY5 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Pcdhga3Q91XY5 Mtmr12-201ENSMUST00000038172 6840 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Pcdhga3Q91XY5 Kri1-201ENSMUST00000038671 2598 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Pcdhga3Q91XY5 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
Pcdhga3Q91XY5 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Pcdhga3Q91XY5 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC14.76□□□□□ -0.05
Pcdhga3Q91XY5 Gm37055-201ENSMUST00000191866 133 ntBASIC14.76□□□□□ -0.05
Pcdhga3Q91XY5 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Pcdhga3Q91XY5 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Pcdhga3Q91XY5 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Pcdhga3Q91XY5 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Pcdhga3Q91XY5 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Pcdhga3Q91XY5 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC14.76□□□□□ -0.05
Pcdhga3Q91XY5 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Pcdhga3Q91XY5 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Pcdhga3Q91XY5 Rtp2-201ENSMUST00000061030 2421 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Pcdhga3Q91XY5 Ppard-201ENSMUST00000002320 3218 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Pcdhga3Q91XY5 Parg-201ENSMUST00000022470 4413 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Pcdhga3Q91XY5 Lamc1-201ENSMUST00000027752 7622 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Pcdhga3Q91XY5 Gch1-201ENSMUST00000089959 2775 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Pcdhga3Q91XY5 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Pcdhga3Q91XY5 Aste1-202ENSMUST00000123807 2349 ntAPPRIS ALT2 TSL 2 BASIC14.76□□□□□ -0.05
Pcdhga3Q91XY5 Mbnl1-201ENSMUST00000099087 5655 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Pcdhga3Q91XY5 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
Pcdhga3Q91XY5 Sema6b-201ENSMUST00000001256 3736 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 28.2 ms