Protein–RNA interactions for Protein: Q91VD8

Pcdhb17, MCG141290, mousemouse

Predictions only

Length 799 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb17Q91VD8 Gm11860-201ENSMUST00000122346 1010 ntBASIC17.22■□□□□ 0.35
Pcdhb17Q91VD8 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC17.22■□□□□ 0.35
Pcdhb17Q91VD8 Pyy-201ENSMUST00000017455 555 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
Pcdhb17Q91VD8 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC17.22■□□□□ 0.35
Pcdhb17Q91VD8 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC17.22■□□□□ 0.35
Pcdhb17Q91VD8 Hint2-201ENSMUST00000030192 610 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Pcdhb17Q91VD8 Ager-201ENSMUST00000015596 1370 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
Pcdhb17Q91VD8 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Pcdhb17Q91VD8 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Pcdhb17Q91VD8 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Pcdhb17Q91VD8 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Pcdhb17Q91VD8 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
Pcdhb17Q91VD8 4933428G20Rik-201ENSMUST00000056955 1425 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Pcdhb17Q91VD8 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Pcdhb17Q91VD8 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
Pcdhb17Q91VD8 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
Pcdhb17Q91VD8 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Pcdhb17Q91VD8 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Pcdhb17Q91VD8 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
Pcdhb17Q91VD8 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Pcdhb17Q91VD8 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Pcdhb17Q91VD8 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Pcdhb17Q91VD8 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Pcdhb17Q91VD8 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Pcdhb17Q91VD8 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Pcdhb17Q91VD8 AA414768-201ENSMUST00000121924 1257 ntBASIC17.21■□□□□ 0.35
Pcdhb17Q91VD8 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
Pcdhb17Q91VD8 Gm16107-201ENSMUST00000162523 862 ntBASIC17.21■□□□□ 0.35
Pcdhb17Q91VD8 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC17.21■□□□□ 0.35
Pcdhb17Q91VD8 Gm29707-201ENSMUST00000196325 491 ntBASIC17.21■□□□□ 0.35
Pcdhb17Q91VD8 Gm18421-201ENSMUST00000204122 625 ntBASIC17.21■□□□□ 0.35
Pcdhb17Q91VD8 AC153912.1-201ENSMUST00000217011 724 ntAPPRIS P1 TSL 3 BASIC17.21■□□□□ 0.35
Pcdhb17Q91VD8 Arhgef33-209ENSMUST00000225223 714 ntBASIC17.21■□□□□ 0.35
Pcdhb17Q91VD8 Nudt1-201ENSMUST00000050205 954 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Pcdhb17Q91VD8 Rln3-201ENSMUST00000061923 634 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Pcdhb17Q91VD8 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Pcdhb17Q91VD8 Prl6a1-201ENSMUST00000091679 1093 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
Pcdhb17Q91VD8 Prl6a1-202ENSMUST00000091680 868 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Pcdhb17Q91VD8 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC17.21■□□□□ 0.35
Pcdhb17Q91VD8 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.34
Pcdhb17Q91VD8 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC17.21■□□□□ 0.34
Pcdhb17Q91VD8 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Pcdhb17Q91VD8 Iqcd-202ENSMUST00000094391 1673 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Pcdhb17Q91VD8 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Pcdhb17Q91VD8 Haus4-201ENSMUST00000022784 1587 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Pcdhb17Q91VD8 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Pcdhb17Q91VD8 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Pcdhb17Q91VD8 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Pcdhb17Q91VD8 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Pcdhb17Q91VD8 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
Pcdhb17Q91VD8 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Pcdhb17Q91VD8 Atp6v1c2-207ENSMUST00000156727 1279 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Pcdhb17Q91VD8 Gm6728-201ENSMUST00000178117 1065 ntBASIC17.2■□□□□ 0.34
Pcdhb17Q91VD8 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Pcdhb17Q91VD8 Hist1h2bm-201ENSMUST00000224651 524 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
Pcdhb17Q91VD8 Grcc10-201ENSMUST00000004389 863 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Pcdhb17Q91VD8 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Pcdhb17Q91VD8 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Pcdhb17Q91VD8 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
Pcdhb17Q91VD8 Gm8839-201ENSMUST00000121279 1645 ntBASIC17.2■□□□□ 0.34
Pcdhb17Q91VD8 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Pcdhb17Q91VD8 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Pcdhb17Q91VD8 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Pcdhb17Q91VD8 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Pcdhb17Q91VD8 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC17.2■□□□□ 0.34
Pcdhb17Q91VD8 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Pcdhb17Q91VD8 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Pcdhb17Q91VD8 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Pcdhb17Q91VD8 Unc13b-201ENSMUST00000079978 6354 ntAPPRIS P2 TSL 5 BASIC17.19■□□□□ 0.34
Pcdhb17Q91VD8 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Pcdhb17Q91VD8 Cryl1-201ENSMUST00000022517 1497 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Pcdhb17Q91VD8 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Pcdhb17Q91VD8 EU599041-202ENSMUST00000205291 1386 ntTSL 5 BASIC17.19■□□□□ 0.34
Pcdhb17Q91VD8 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
Pcdhb17Q91VD8 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
Pcdhb17Q91VD8 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC17.19■□□□□ 0.34
Pcdhb17Q91VD8 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Pcdhb17Q91VD8 Gm25016-201ENSMUST00000158399 131 ntBASIC17.19■□□□□ 0.34
Pcdhb17Q91VD8 Rfesd-202ENSMUST00000167271 595 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
Pcdhb17Q91VD8 Fbxo6-208ENSMUST00000168503 1240 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
Pcdhb17Q91VD8 1700094J05Rik-202ENSMUST00000190491 997 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Pcdhb17Q91VD8 Rnase9-201ENSMUST00000064214 1189 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Pcdhb17Q91VD8 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Pcdhb17Q91VD8 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC17.19■□□□□ 0.34
Pcdhb17Q91VD8 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Pcdhb17Q91VD8 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC17.19■□□□□ 0.34
Pcdhb17Q91VD8 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Pcdhb17Q91VD8 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Pcdhb17Q91VD8 Gm8258-201ENSMUST00000055593 1449 ntBASIC17.19■□□□□ 0.34
Pcdhb17Q91VD8 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Pcdhb17Q91VD8 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
Pcdhb17Q91VD8 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Pcdhb17Q91VD8 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Pcdhb17Q91VD8 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Pcdhb17Q91VD8 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Pcdhb17Q91VD8 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Pcdhb17Q91VD8 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
Pcdhb17Q91VD8 Gm13216-201ENSMUST00000117145 591 ntBASIC17.18■□□□□ 0.34
Pcdhb17Q91VD8 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC17.18■□□□□ 0.34
Pcdhb17Q91VD8 CT010431.1-201ENSMUST00000221249 1080 ntBASIC17.18■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 22.5 ms