Protein–RNA interactions for Protein: Q91V10

Vsx1, Visual system homeobox 1, mousemouse

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vsx1Q91V10 Fam221a-202ENSMUST00000121903 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Vsx1Q91V10 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Vsx1Q91V10 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC16.38■□□□□ 0.21
Vsx1Q91V10 Gm8909-203ENSMUST00000173353 1428 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
Vsx1Q91V10 Gm32996-201ENSMUST00000199828 1447 ntBASIC16.38■□□□□ 0.21
Vsx1Q91V10 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Vsx1Q91V10 Banf1-202ENSMUST00000170010 742 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Vsx1Q91V10 Cyba-202ENSMUST00000212600 638 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Vsx1Q91V10 Izumo1r-201ENSMUST00000034409 1291 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Vsx1Q91V10 Ly6g6f-201ENSMUST00000038507 1141 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Vsx1Q91V10 Lce3b-201ENSMUST00000046234 562 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Vsx1Q91V10 Tnp2-201ENSMUST00000051297 549 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Vsx1Q91V10 Slbp-202ENSMUST00000075670 1027 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Vsx1Q91V10 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Vsx1Q91V10 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Vsx1Q91V10 Gins4-201ENSMUST00000033950 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Vsx1Q91V10 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
Vsx1Q91V10 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC16.38■□□□□ 0.21
Vsx1Q91V10 Gm45244-201ENSMUST00000211328 2200 ntBASIC16.38■□□□□ 0.21
Vsx1Q91V10 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
Vsx1Q91V10 Gm43294-201ENSMUST00000202850 2490 ntBASIC16.38■□□□□ 0.21
Vsx1Q91V10 Gm37374-201ENSMUST00000194954 1829 ntBASIC16.38■□□□□ 0.21
Vsx1Q91V10 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Vsx1Q91V10 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC16.37■□□□□ 0.21
Vsx1Q91V10 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Vsx1Q91V10 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Vsx1Q91V10 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Vsx1Q91V10 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Vsx1Q91V10 Cnn2-202ENSMUST00000105374 926 ntTSL 5 BASIC16.37■□□□□ 0.21
Vsx1Q91V10 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
Vsx1Q91V10 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Vsx1Q91V10 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC16.37■□□□□ 0.21
Vsx1Q91V10 Gm42413-201ENSMUST00000196216 338 ntTSL 5 BASIC16.37■□□□□ 0.21
Vsx1Q91V10 Psmg3-201ENSMUST00000031531 883 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Vsx1Q91V10 2300002M23Rik-201ENSMUST00000044326 1290 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Vsx1Q91V10 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC16.37■□□□□ 0.21
Vsx1Q91V10 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
Vsx1Q91V10 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Vsx1Q91V10 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Vsx1Q91V10 Zkscan3-202ENSMUST00000116433 1421 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Vsx1Q91V10 Nagk-201ENSMUST00000037376 1405 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Vsx1Q91V10 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Vsx1Q91V10 Higd1b-202ENSMUST00000107072 497 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
Vsx1Q91V10 Higd1b-203ENSMUST00000107073 530 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
Vsx1Q91V10 Tpt1-201ENSMUST00000110894 1169 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Vsx1Q91V10 Gm13186-201ENSMUST00000118031 316 ntBASIC16.36■□□□□ 0.21
Vsx1Q91V10 Gm6736-201ENSMUST00000166583 948 ntBASIC16.36■□□□□ 0.21
Vsx1Q91V10 Higd1b-201ENSMUST00000021302 735 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Vsx1Q91V10 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Vsx1Q91V10 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Vsx1Q91V10 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
Vsx1Q91V10 Dtx3-202ENSMUST00000116229 1994 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Vsx1Q91V10 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
Vsx1Q91V10 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Vsx1Q91V10 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Vsx1Q91V10 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
Vsx1Q91V10 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Vsx1Q91V10 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Vsx1Q91V10 Tubb6-201ENSMUST00000001513 1757 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Vsx1Q91V10 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Vsx1Q91V10 Prdm5-201ENSMUST00000031973 1488 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Vsx1Q91V10 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
Vsx1Q91V10 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Vsx1Q91V10 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Vsx1Q91V10 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Vsx1Q91V10 Phf7-203ENSMUST00000226565 1971 ntBASIC16.35■□□□□ 0.21
Vsx1Q91V10 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Vsx1Q91V10 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Vsx1Q91V10 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC16.35■□□□□ 0.21
Vsx1Q91V10 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC16.35■□□□□ 0.21
Vsx1Q91V10 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Vsx1Q91V10 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Vsx1Q91V10 Gm23935-201ENSMUST00000102303 57 ntBASIC16.35■□□□□ 0.21
Vsx1Q91V10 Gm24270-201ENSMUST00000102326 57 ntBASIC16.35■□□□□ 0.21
Vsx1Q91V10 Gm13312-201ENSMUST00000119631 718 ntBASIC16.35■□□□□ 0.21
Vsx1Q91V10 Gm20878-206ENSMUST00000153997 903 ntAPPRIS P2 TSL 2 BASIC16.35■□□□□ 0.21
Vsx1Q91V10 Gm24245-201ENSMUST00000157318 57 ntBASIC16.35■□□□□ 0.21
Vsx1Q91V10 Fbxo17-205ENSMUST00000167118 861 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
Vsx1Q91V10 Gm27000-201ENSMUST00000182943 842 ntBASIC16.35■□□□□ 0.21
Vsx1Q91V10 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC16.35■□□□□ 0.21
Vsx1Q91V10 AV026068-207ENSMUST00000187718 400 ntTSL 5 BASIC16.35■□□□□ 0.21
Vsx1Q91V10 Lmo4-207ENSMUST00000196264 1263 ntTSL 5 BASIC16.35■□□□□ 0.21
Vsx1Q91V10 Npcd-201ENSMUST00000023060 1162 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Vsx1Q91V10 Hist1h2bg-201ENSMUST00000079251 618 ntAPPRIS P1 BASIC16.35■□□□□ 0.21
Vsx1Q91V10 Hist1h2bn-201ENSMUST00000091709 381 ntAPPRIS P1 BASIC16.35■□□□□ 0.21
Vsx1Q91V10 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Vsx1Q91V10 Mis18a-201ENSMUST00000099554 1333 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Vsx1Q91V10 Tpm1-215ENSMUST00000113705 1759 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Vsx1Q91V10 Gm19721-201ENSMUST00000195284 1764 ntBASIC16.35■□□□□ 0.21
Vsx1Q91V10 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC16.35■□□□□ 0.21
Vsx1Q91V10 Gm18856-201ENSMUST00000178096 1374 ntBASIC16.35■□□□□ 0.21
Vsx1Q91V10 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Vsx1Q91V10 Mier2-212ENSMUST00000172158 1400 ntTSL 5 BASIC16.35■□□□□ 0.21
Vsx1Q91V10 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Vsx1Q91V10 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Vsx1Q91V10 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
Vsx1Q91V10 Jmy-201ENSMUST00000065537 8776 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Vsx1Q91V10 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Vsx1Q91V10 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
Vsx1Q91V10 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 22.5 ms