Protein–RNA interactions for Protein: Q8VIJ6

Sfpq, Splicing factor, proline- and glutamine-rich, mousemouse

Known RBP Predictions only

Length 699 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SfpqQ8VIJ6 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
SfpqQ8VIJ6 Tmem87b-201ENSMUST00000110325 4807 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SfpqQ8VIJ6 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
SfpqQ8VIJ6 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC17.55■□□□□ 0.4
SfpqQ8VIJ6 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SfpqQ8VIJ6 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SfpqQ8VIJ6 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SfpqQ8VIJ6 Fam171a1-203ENSMUST00000091505 3449 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
SfpqQ8VIJ6 Sclt1-201ENSMUST00000026866 3005 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
SfpqQ8VIJ6 Nrn1-203ENSMUST00000223611 1443 ntBASIC17.55■□□□□ 0.4
SfpqQ8VIJ6 Tex261-201ENSMUST00000014892 2984 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SfpqQ8VIJ6 Sppl3-201ENSMUST00000031530 3204 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SfpqQ8VIJ6 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC17.55■□□□□ 0.4
SfpqQ8VIJ6 Slc13a3-202ENSMUST00000109279 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
SfpqQ8VIJ6 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SfpqQ8VIJ6 Gpd2-202ENSMUST00000112618 5759 ntTSL 5 BASIC17.54■□□□□ 0.4
SfpqQ8VIJ6 Ak3-201ENSMUST00000025696 2809 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SfpqQ8VIJ6 G3bp2-204ENSMUST00000169094 2716 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
SfpqQ8VIJ6 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
SfpqQ8VIJ6 Fmnl3-201ENSMUST00000081224 4137 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
SfpqQ8VIJ6 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC17.54■□□□□ 0.4
SfpqQ8VIJ6 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC17.54■□□□□ 0.4
SfpqQ8VIJ6 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
SfpqQ8VIJ6 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
SfpqQ8VIJ6 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
SfpqQ8VIJ6 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
SfpqQ8VIJ6 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SfpqQ8VIJ6 9130019P16Rik-202ENSMUST00000145111 4486 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
SfpqQ8VIJ6 Agpat1-201ENSMUST00000037489 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SfpqQ8VIJ6 Atxn7l3-201ENSMUST00000073234 3688 ntAPPRIS ALT1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SfpqQ8VIJ6 Aste1-202ENSMUST00000123807 2349 ntAPPRIS ALT2 TSL 2 BASIC17.54■□□□□ 0.4
SfpqQ8VIJ6 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC17.54■□□□□ 0.4
SfpqQ8VIJ6 Mff-212ENSMUST00000162003 2087 ntTSL 5 BASIC17.54■□□□□ 0.4
SfpqQ8VIJ6 Leprotl1-201ENSMUST00000033910 2879 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SfpqQ8VIJ6 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC17.53■□□□□ 0.4
SfpqQ8VIJ6 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC17.53■□□□□ 0.4
SfpqQ8VIJ6 Sipa1l1-202ENSMUST00000166429 8215 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
SfpqQ8VIJ6 Nlk-201ENSMUST00000142739 4444 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SfpqQ8VIJ6 Adss-201ENSMUST00000016105 2771 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SfpqQ8VIJ6 Mgat1-201ENSMUST00000081794 2976 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SfpqQ8VIJ6 Nadk-203ENSMUST00000105613 3152 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
SfpqQ8VIJ6 Casp8ap2-201ENSMUST00000029950 6799 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
SfpqQ8VIJ6 Gm13327-201ENSMUST00000133391 2741 ntTSL 5 BASIC17.53■□□□□ 0.4
SfpqQ8VIJ6 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
SfpqQ8VIJ6 Gm20049-201ENSMUST00000219950 730 ntBASIC17.53■□□□□ 0.4
SfpqQ8VIJ6 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SfpqQ8VIJ6 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
SfpqQ8VIJ6 Col4a3bp-203ENSMUST00000179226 3040 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
SfpqQ8VIJ6 Crtac1-201ENSMUST00000048630 2616 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SfpqQ8VIJ6 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SfpqQ8VIJ6 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SfpqQ8VIJ6 Tfeb-204ENSMUST00000113288 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
SfpqQ8VIJ6 Il3ra-203ENSMUST00000224163 2315 ntAPPRIS P2 BASIC17.53■□□□□ 0.4
SfpqQ8VIJ6 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
SfpqQ8VIJ6 Zcchc17-202ENSMUST00000134159 2113 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SfpqQ8VIJ6 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
SfpqQ8VIJ6 9530068E07Rik-201ENSMUST00000036952 2467 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
SfpqQ8VIJ6 Fmnl2-202ENSMUST00000050719 3380 ntTSL 5 BASIC17.53■□□□□ 0.4
SfpqQ8VIJ6 Slc6a1-204ENSMUST00000204074 1740 ntTSL 5 BASIC17.52■□□□□ 0.4
SfpqQ8VIJ6 Cdon-202ENSMUST00000119129 7503 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
SfpqQ8VIJ6 Prmt2-202ENSMUST00000099571 2052 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
SfpqQ8VIJ6 Scin-201ENSMUST00000002640 2995 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
SfpqQ8VIJ6 Klhdc8b-201ENSMUST00000035232 1897 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
SfpqQ8VIJ6 Hif3a-201ENSMUST00000037762 2206 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
SfpqQ8VIJ6 Dnal4-201ENSMUST00000023055 1469 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
SfpqQ8VIJ6 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC17.52■□□□□ 0.4
SfpqQ8VIJ6 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC17.52■□□□□ 0.4
SfpqQ8VIJ6 Gm27000-201ENSMUST00000182943 842 ntBASIC17.52■□□□□ 0.4
SfpqQ8VIJ6 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
SfpqQ8VIJ6 Cux2-201ENSMUST00000086317 5113 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
SfpqQ8VIJ6 Atp8b2-210ENSMUST00000168276 4265 ntAPPRIS P2 TSL 5 BASIC17.52■□□□□ 0.4
SfpqQ8VIJ6 Tcp1-209ENSMUST00000151287 2446 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
SfpqQ8VIJ6 Seh1l-201ENSMUST00000025421 3516 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
SfpqQ8VIJ6 Phtf1-202ENSMUST00000063717 3327 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
SfpqQ8VIJ6 Stx6-201ENSMUST00000027743 4589 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
SfpqQ8VIJ6 Gm11696-201ENSMUST00000070956 2765 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
SfpqQ8VIJ6 Whrn-207ENSMUST00000107393 4028 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
SfpqQ8VIJ6 Whrn-203ENSMUST00000084510 4049 ntAPPRIS P4 TSL 1 (best) BASIC17.51■□□□□ 0.39
SfpqQ8VIJ6 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SfpqQ8VIJ6 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
SfpqQ8VIJ6 Phactr2-203ENSMUST00000105545 8556 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
SfpqQ8VIJ6 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
SfpqQ8VIJ6 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
SfpqQ8VIJ6 Prdm12-201ENSMUST00000113470 2471 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
SfpqQ8VIJ6 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC17.51■□□□□ 0.39
SfpqQ8VIJ6 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SfpqQ8VIJ6 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC17.51■□□□□ 0.39
SfpqQ8VIJ6 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SfpqQ8VIJ6 Parg-204ENSMUST00000164137 3013 ntTSL 5 BASIC17.51■□□□□ 0.39
SfpqQ8VIJ6 Pde8b-202ENSMUST00000067082 2598 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
SfpqQ8VIJ6 Dbnl-202ENSMUST00000102928 2295 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
SfpqQ8VIJ6 Prss53-201ENSMUST00000121394 2134 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SfpqQ8VIJ6 Ankrd23-201ENSMUST00000054665 1964 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SfpqQ8VIJ6 Cbx8-201ENSMUST00000026663 3580 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SfpqQ8VIJ6 Snx18-201ENSMUST00000109241 4447 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SfpqQ8VIJ6 Med7-209ENSMUST00000170928 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SfpqQ8VIJ6 Usp32-202ENSMUST00000108075 7053 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
SfpqQ8VIJ6 Atp5a1-201ENSMUST00000026495 2471 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SfpqQ8VIJ6 Kcnh2-202ENSMUST00000115098 3193 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
SfpqQ8VIJ6 Ythdc2-201ENSMUST00000037763 7215 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 33.5 ms