Protein–RNA interactions for Protein: Q8VIG6

Traip, E3 ubiquitin-protein ligase TRAIP, mousemouse

Predictions only

Length 470 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TraipQ8VIG6 Chd3os-202ENSMUST00000151617 389 ntTSL 3 BASIC17.61■□□□□ 0.41
TraipQ8VIG6 Gm28659-201ENSMUST00000188013 759 ntBASIC17.61■□□□□ 0.41
TraipQ8VIG6 4931422A03Rik-201ENSMUST00000056170 1037 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
TraipQ8VIG6 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
TraipQ8VIG6 Slc25a3-206ENSMUST00000170810 1341 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
TraipQ8VIG6 Gm44832-201ENSMUST00000208849 2303 ntBASIC17.61■□□□□ 0.41
TraipQ8VIG6 Rbm11-201ENSMUST00000046378 1400 ntAPPRIS P2 TSL 5 BASIC17.61■□□□□ 0.41
TraipQ8VIG6 Gm13283-201ENSMUST00000191112 1463 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
TraipQ8VIG6 Ndufv2-203ENSMUST00000143987 1540 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
TraipQ8VIG6 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC17.61■□□□□ 0.41
TraipQ8VIG6 Ptn-201ENSMUST00000101534 1614 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
TraipQ8VIG6 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
TraipQ8VIG6 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
TraipQ8VIG6 Qprt-201ENSMUST00000032912 2050 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
TraipQ8VIG6 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC17.6■□□□□ 0.41
TraipQ8VIG6 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
TraipQ8VIG6 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
TraipQ8VIG6 Arhgap33-206ENSMUST00000208522 781 ntTSL 3 BASIC17.6■□□□□ 0.41
TraipQ8VIG6 CT009713.7-201ENSMUST00000224689 571 ntBASIC17.6■□□□□ 0.41
TraipQ8VIG6 Mgarp-201ENSMUST00000038154 1232 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
TraipQ8VIG6 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
TraipQ8VIG6 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
TraipQ8VIG6 Hpca-203ENSMUST00000116442 1568 ntAPPRIS P1 TSL 3 BASIC17.6■□□□□ 0.41
TraipQ8VIG6 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
TraipQ8VIG6 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
TraipQ8VIG6 Jam2-201ENSMUST00000098407 1998 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
TraipQ8VIG6 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
TraipQ8VIG6 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
TraipQ8VIG6 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
TraipQ8VIG6 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
TraipQ8VIG6 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
TraipQ8VIG6 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
TraipQ8VIG6 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
TraipQ8VIG6 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
TraipQ8VIG6 Gss-203ENSMUST00000130881 1724 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
TraipQ8VIG6 Mff-211ENSMUST00000161648 1715 ntTSL 5 BASIC17.59■□□□□ 0.41
TraipQ8VIG6 Efemp2-204ENSMUST00000165485 1557 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
TraipQ8VIG6 B3gnt4-201ENSMUST00000031384 1423 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
TraipQ8VIG6 Mrm2-201ENSMUST00000031536 1443 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
TraipQ8VIG6 Mansc4-201ENSMUST00000100780 1125 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
TraipQ8VIG6 Oraov1-203ENSMUST00000105895 1016 ntAPPRIS ALT2 TSL 2 BASIC17.59■□□□□ 0.41
TraipQ8VIG6 Bhlhe41-202ENSMUST00000111703 744 ntTSL 3 BASIC17.59■□□□□ 0.41
TraipQ8VIG6 Gm15165-201ENSMUST00000118140 502 ntBASIC17.59■□□□□ 0.41
TraipQ8VIG6 Platr15-201ENSMUST00000147128 768 ntTSL 5 BASIC17.59■□□□□ 0.41
TraipQ8VIG6 Slc19a2-204ENSMUST00000169394 894 ntTSL 5 BASIC17.59■□□□□ 0.41
TraipQ8VIG6 Zfp524-203ENSMUST00000209030 1128 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
TraipQ8VIG6 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
TraipQ8VIG6 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
TraipQ8VIG6 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
TraipQ8VIG6 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
TraipQ8VIG6 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
TraipQ8VIG6 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
TraipQ8VIG6 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
TraipQ8VIG6 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.41
TraipQ8VIG6 Tpm1-215ENSMUST00000113705 1759 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
TraipQ8VIG6 Mamstr-201ENSMUST00000148532 1606 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
TraipQ8VIG6 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC17.58■□□□□ 0.41
TraipQ8VIG6 D10Jhu81e-201ENSMUST00000001242 1378 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
TraipQ8VIG6 Rftn1-201ENSMUST00000044503 4029 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
TraipQ8VIG6 Gpr142-202ENSMUST00000106584 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
TraipQ8VIG6 Bex1-203ENSMUST00000113120 718 ntAPPRIS P1 TSL 3 BASIC17.58■□□□□ 0.4
TraipQ8VIG6 Speg-202ENSMUST00000113587 1254 ntTSL 5 BASIC17.58■□□□□ 0.4
TraipQ8VIG6 Trmt112-202ENSMUST00000116551 985 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
TraipQ8VIG6 Gm12644-201ENSMUST00000119935 606 ntBASIC17.58■□□□□ 0.4
TraipQ8VIG6 Eapp-203ENSMUST00000160085 676 ntTSL 3 BASIC17.58■□□□□ 0.4
TraipQ8VIG6 Syne4-208ENSMUST00000176304 1006 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
TraipQ8VIG6 Mir8098-201ENSMUST00000184011 137 ntBASIC17.58■□□□□ 0.4
TraipQ8VIG6 Nudt14-203ENSMUST00000221497 355 ntTSL 2 BASIC17.58■□□□□ 0.4
TraipQ8VIG6 Il17b-201ENSMUST00000025471 692 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
TraipQ8VIG6 Gpr142-201ENSMUST00000045319 1098 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
TraipQ8VIG6 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
TraipQ8VIG6 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
TraipQ8VIG6 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC17.58■□□□□ 0.4
TraipQ8VIG6 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
TraipQ8VIG6 Emd-201ENSMUST00000002029 1595 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TraipQ8VIG6 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TraipQ8VIG6 Ovol2-202ENSMUST00000103171 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
TraipQ8VIG6 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TraipQ8VIG6 Zfp133-ps-202ENSMUST00000124788 1079 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
TraipQ8VIG6 Gm12536-201ENSMUST00000129102 358 ntTSL 2 BASIC17.57■□□□□ 0.4
TraipQ8VIG6 Cklf-201ENSMUST00000034342 667 ntAPPRIS P4 TSL 1 (best) BASIC17.57■□□□□ 0.4
TraipQ8VIG6 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TraipQ8VIG6 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TraipQ8VIG6 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
TraipQ8VIG6 Vps72-201ENSMUST00000009102 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TraipQ8VIG6 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
TraipQ8VIG6 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TraipQ8VIG6 Tssc4-206ENSMUST00000177841 1364 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
TraipQ8VIG6 Dkk1-201ENSMUST00000025803 2427 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TraipQ8VIG6 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
TraipQ8VIG6 Pih1d1-202ENSMUST00000107811 1072 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TraipQ8VIG6 Upp1-205ENSMUST00000164791 1252 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TraipQ8VIG6 Gm26661-201ENSMUST00000181025 471 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
TraipQ8VIG6 Gm13830-205ENSMUST00000201195 1155 ntBASIC17.56■□□□□ 0.4
TraipQ8VIG6 AC159301.1-201ENSMUST00000225130 1182 ntBASIC17.56■□□□□ 0.4
TraipQ8VIG6 Ermp1-203ENSMUST00000159692 7058 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TraipQ8VIG6 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TraipQ8VIG6 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC17.56■□□□□ 0.4
TraipQ8VIG6 Phyhip-201ENSMUST00000003561 2838 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TraipQ8VIG6 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 26.6 ms