Protein–RNA interactions for Protein: Q8VEE4

Rpa1, Replication protein A 70 kDa DNA-binding subunit, mousemouse

Known RBP Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpa1Q8VEE4 Rffl-202ENSMUST00000071152 3633 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Rpa1Q8VEE4 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC16.76■□□□□ 0.27
Rpa1Q8VEE4 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Rpa1Q8VEE4 Adipor1-202ENSMUST00000112237 3446 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Rpa1Q8VEE4 Ckap4-201ENSMUST00000053871 3089 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Rpa1Q8VEE4 Psmd8-201ENSMUST00000059642 1540 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Rpa1Q8VEE4 Zfx-201ENSMUST00000088102 7002 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Rpa1Q8VEE4 Samd4-204ENSMUST00000125688 1773 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Rpa1Q8VEE4 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Rpa1Q8VEE4 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Rpa1Q8VEE4 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
Rpa1Q8VEE4 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Rpa1Q8VEE4 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Rpa1Q8VEE4 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Rpa1Q8VEE4 Xrcc1-205ENSMUST00000205573 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Rpa1Q8VEE4 Tll1-201ENSMUST00000066166 4767 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Rpa1Q8VEE4 Ndufs2-202ENSMUST00000111318 1545 ntTSL 5 BASIC16.75■□□□□ 0.27
Rpa1Q8VEE4 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Rpa1Q8VEE4 Rflna-201ENSMUST00000036109 1681 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
Rpa1Q8VEE4 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Rpa1Q8VEE4 Stum-201ENSMUST00000136521 6506 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Rpa1Q8VEE4 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Rpa1Q8VEE4 Foxp4-201ENSMUST00000097311 3197 ntAPPRIS P4 TSL 1 (best) BASIC16.75■□□□□ 0.27
Rpa1Q8VEE4 Zfp142-201ENSMUST00000027315 6480 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Rpa1Q8VEE4 Taf5l-201ENSMUST00000093039 2912 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Rpa1Q8VEE4 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Rpa1Q8VEE4 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
Rpa1Q8VEE4 Cog8-201ENSMUST00000034391 2954 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Rpa1Q8VEE4 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
Rpa1Q8VEE4 Mllt10-204ENSMUST00000114680 3543 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Rpa1Q8VEE4 Mapk8ip3-208ENSMUST00000121787 5431 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Rpa1Q8VEE4 Ppfia3-207ENSMUST00000211067 4565 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
Rpa1Q8VEE4 Chrna4-201ENSMUST00000067120 4565 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Rpa1Q8VEE4 Ccdc13-202ENSMUST00000135986 2640 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
Rpa1Q8VEE4 Rhbg-201ENSMUST00000171887 1937 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Rpa1Q8VEE4 Sec31a-201ENSMUST00000094578 4228 ntAPPRIS P2 TSL 5 BASIC16.74■□□□□ 0.27
Rpa1Q8VEE4 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Rpa1Q8VEE4 Svip-201ENSMUST00000098414 3053 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Rpa1Q8VEE4 Fmnl3-201ENSMUST00000081224 4137 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Rpa1Q8VEE4 Erlec1-201ENSMUST00000073192 2532 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Rpa1Q8VEE4 Pdss2-201ENSMUST00000095725 2127 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Rpa1Q8VEE4 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Rpa1Q8VEE4 Stpg1-201ENSMUST00000063707 2380 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Rpa1Q8VEE4 Tubgcp4-202ENSMUST00000110657 1992 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Rpa1Q8VEE4 Grhl2-203ENSMUST00000161405 1996 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Rpa1Q8VEE4 Nrg2-203ENSMUST00000115713 3001 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
Rpa1Q8VEE4 St7l-211ENSMUST00000200132 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Rpa1Q8VEE4 Rell1-204ENSMUST00000154169 3241 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Rpa1Q8VEE4 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Rpa1Q8VEE4 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC16.73■□□□□ 0.27
Rpa1Q8VEE4 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Rpa1Q8VEE4 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Rpa1Q8VEE4 Gm26524-201ENSMUST00000192339 390 ntBASIC16.73■□□□□ 0.27
Rpa1Q8VEE4 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Rpa1Q8VEE4 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC16.73■□□□□ 0.27
Rpa1Q8VEE4 Sesn1-202ENSMUST00000099931 3809 ntAPPRIS ALT1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Rpa1Q8VEE4 Gpr6-201ENSMUST00000061796 1786 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Rpa1Q8VEE4 Adam15-202ENSMUST00000074582 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Rpa1Q8VEE4 Klhl29-201ENSMUST00000020958 7041 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Rpa1Q8VEE4 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC16.73■□□□□ 0.27
Rpa1Q8VEE4 Nectin2-201ENSMUST00000075447 2735 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
Rpa1Q8VEE4 Hist1h2ac-201ENSMUST00000171127 2482 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
Rpa1Q8VEE4 Ppp2r2a-204ENSMUST00000225380 1988 ntBASIC16.73■□□□□ 0.27
Rpa1Q8VEE4 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC16.73■□□□□ 0.27
Rpa1Q8VEE4 Bcor-203ENSMUST00000115512 6887 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Rpa1Q8VEE4 Rcc1-203ENSMUST00000105951 2326 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
Rpa1Q8VEE4 Mapk8ip1-201ENSMUST00000050312 2930 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
Rpa1Q8VEE4 Tjp3-201ENSMUST00000045744 3024 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Rpa1Q8VEE4 Atp5b-201ENSMUST00000026459 1916 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Rpa1Q8VEE4 Dbnl-202ENSMUST00000102928 2295 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
Rpa1Q8VEE4 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
Rpa1Q8VEE4 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC16.72■□□□□ 0.27
Rpa1Q8VEE4 Zfp109-203ENSMUST00000206960 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Rpa1Q8VEE4 Robo3-202ENSMUST00000115038 4797 ntAPPRIS P2 TSL 5 BASIC16.72■□□□□ 0.27
Rpa1Q8VEE4 Usp43-202ENSMUST00000108677 4447 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Rpa1Q8VEE4 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Rpa1Q8VEE4 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC16.72■□□□□ 0.27
Rpa1Q8VEE4 Gm15375-201ENSMUST00000119510 849 ntBASIC16.72■□□□□ 0.27
Rpa1Q8VEE4 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC16.72■□□□□ 0.27
Rpa1Q8VEE4 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Rpa1Q8VEE4 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC16.72■□□□□ 0.27
Rpa1Q8VEE4 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
Rpa1Q8VEE4 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC16.72■□□□□ 0.27
Rpa1Q8VEE4 Rab3c-203ENSMUST00000224180 967 ntBASIC16.72■□□□□ 0.27
Rpa1Q8VEE4 Ret-202ENSMUST00000088790 4497 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Rpa1Q8VEE4 Znfx1-201ENSMUST00000048988 7218 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Rpa1Q8VEE4 Trip6-201ENSMUST00000024119 2168 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Rpa1Q8VEE4 Fosl2-201ENSMUST00000031017 6537 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Rpa1Q8VEE4 Tox2-201ENSMUST00000099110 2166 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
Rpa1Q8VEE4 Tuba8-201ENSMUST00000032233 2263 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Rpa1Q8VEE4 Hs3st2-201ENSMUST00000084628 2278 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Rpa1Q8VEE4 Shpk-201ENSMUST00000006105 2808 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Rpa1Q8VEE4 Zdhhc15-201ENSMUST00000042070 5509 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Rpa1Q8VEE4 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Rpa1Q8VEE4 9530085L11Rik-201ENSMUST00000203963 2115 ntBASIC16.72■□□□□ 0.27
Rpa1Q8VEE4 Bfsp2-201ENSMUST00000124310 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Rpa1Q8VEE4 Shisa7-201ENSMUST00000066041 6006 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Rpa1Q8VEE4 Iqsec1-202ENSMUST00000101153 8036 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
Rpa1Q8VEE4 Dpagt1-201ENSMUST00000054708 2205 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Rpa1Q8VEE4 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC16.71■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 47.3 ms