Protein–RNA interactions for Protein: Q8VEE1

Lmcd1, LIM and cysteine-rich domains protein 1, mousemouse

Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lmcd1Q8VEE1 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Lmcd1Q8VEE1 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Lmcd1Q8VEE1 Arpp19-210ENSMUST00000170308 429 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
Lmcd1Q8VEE1 Hsf4-203ENSMUST00000172525 1276 ntTSL 5 BASIC17.64■□□□□ 0.41
Lmcd1Q8VEE1 Gm3336-201ENSMUST00000179347 1149 ntAPPRIS P2 TSL 5 BASIC17.64■□□□□ 0.41
Lmcd1Q8VEE1 Entpd4-205ENSMUST00000184314 989 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Lmcd1Q8VEE1 Gm30191-201ENSMUST00000205501 647 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
Lmcd1Q8VEE1 1700012D14Rik-201ENSMUST00000209597 605 ntTSL 3 BASIC17.64■□□□□ 0.41
Lmcd1Q8VEE1 Gm3336-202ENSMUST00000213065 842 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Lmcd1Q8VEE1 AC174742.1-201ENSMUST00000218272 304 ntBASIC17.64■□□□□ 0.41
Lmcd1Q8VEE1 Gm8396-201ENSMUST00000057361 823 ntBASIC17.64■□□□□ 0.41
Lmcd1Q8VEE1 Entpd4b-201ENSMUST00000064846 989 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Lmcd1Q8VEE1 Gm9949-201ENSMUST00000067743 962 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Lmcd1Q8VEE1 Olfr541-201ENSMUST00000080681 1103 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
Lmcd1Q8VEE1 1700086L19Rik-201ENSMUST00000095617 706 ntBASIC17.64■□□□□ 0.41
Lmcd1Q8VEE1 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
Lmcd1Q8VEE1 Il10rb-201ENSMUST00000023691 1850 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Lmcd1Q8VEE1 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC17.64■□□□□ 0.41
Lmcd1Q8VEE1 Diaph2-201ENSMUST00000037854 3742 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Lmcd1Q8VEE1 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Lmcd1Q8VEE1 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Lmcd1Q8VEE1 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Lmcd1Q8VEE1 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
Lmcd1Q8VEE1 Acsl3-205ENSMUST00000142704 2976 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Lmcd1Q8VEE1 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
Lmcd1Q8VEE1 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Lmcd1Q8VEE1 Dio1-202ENSMUST00000106748 396 ntTSL 5 BASIC17.63■□□□□ 0.41
Lmcd1Q8VEE1 Fis1-202ENSMUST00000111094 948 ntTSL 2 BASIC17.63■□□□□ 0.41
Lmcd1Q8VEE1 Nup188-205ENSMUST00000138666 534 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Lmcd1Q8VEE1 Gm27321-201ENSMUST00000185021 205 ntBASIC17.63■□□□□ 0.41
Lmcd1Q8VEE1 A430093F15Rik-205ENSMUST00000188480 509 ntTSL 3 BASIC17.63■□□□□ 0.41
Lmcd1Q8VEE1 Gm37171-201ENSMUST00000192636 1185 ntBASIC17.63■□□□□ 0.41
Lmcd1Q8VEE1 Nckipsd-206ENSMUST00000195323 467 ntTSL 3 BASIC17.63■□□□□ 0.41
Lmcd1Q8VEE1 Gm20383-201ENSMUST00000203799 1227 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Lmcd1Q8VEE1 Hapln3-202ENSMUST00000205782 930 ntTSL 5 BASIC17.63■□□□□ 0.41
Lmcd1Q8VEE1 2010107E04Rik-203ENSMUST00000222874 612 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
Lmcd1Q8VEE1 Ndufv3-202ENSMUST00000064798 485 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Lmcd1Q8VEE1 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Lmcd1Q8VEE1 Gm2694-204ENSMUST00000181898 1303 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Lmcd1Q8VEE1 Crebl2-201ENSMUST00000046303 3629 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Lmcd1Q8VEE1 Cdca7l-201ENSMUST00000021592 2957 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Lmcd1Q8VEE1 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Lmcd1Q8VEE1 Fst-202ENSMUST00000223640 2612 ntBASIC17.63■□□□□ 0.41
Lmcd1Q8VEE1 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Lmcd1Q8VEE1 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Lmcd1Q8VEE1 Prlhr-201ENSMUST00000051277 1572 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
Lmcd1Q8VEE1 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Lmcd1Q8VEE1 Ccl27a-202ENSMUST00000108032 350 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Lmcd1Q8VEE1 Retsat-204ENSMUST00000176168 1203 ntTSL 5 BASIC17.62■□□□□ 0.41
Lmcd1Q8VEE1 Gm8655-201ENSMUST00000221159 852 ntBASIC17.62■□□□□ 0.41
Lmcd1Q8VEE1 Dnajb8-201ENSMUST00000061866 990 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
Lmcd1Q8VEE1 Acyp2-201ENSMUST00000074613 863 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Lmcd1Q8VEE1 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Lmcd1Q8VEE1 Gm13127-201ENSMUST00000118978 1389 ntBASIC17.62■□□□□ 0.41
Lmcd1Q8VEE1 Nap1l1-206ENSMUST00000219143 1365 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Lmcd1Q8VEE1 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Lmcd1Q8VEE1 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Lmcd1Q8VEE1 Stambp-206ENSMUST00000206400 2144 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Lmcd1Q8VEE1 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
Lmcd1Q8VEE1 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Lmcd1Q8VEE1 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Lmcd1Q8VEE1 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Lmcd1Q8VEE1 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Lmcd1Q8VEE1 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC17.61■□□□□ 0.41
Lmcd1Q8VEE1 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
Lmcd1Q8VEE1 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Lmcd1Q8VEE1 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Lmcd1Q8VEE1 Siva1-202ENSMUST00000109755 333 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Lmcd1Q8VEE1 Rabepk-202ENSMUST00000113086 1106 ntTSL 5 BASIC17.61■□□□□ 0.41
Lmcd1Q8VEE1 1810008I18Rik-202ENSMUST00000187848 819 ntTSL 3 BASIC17.61■□□□□ 0.41
Lmcd1Q8VEE1 1110035H17Rik-202ENSMUST00000205672 1231 ntBASIC17.61■□□□□ 0.41
Lmcd1Q8VEE1 Ccdc88c-204ENSMUST00000223097 1253 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Lmcd1Q8VEE1 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Lmcd1Q8VEE1 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Lmcd1Q8VEE1 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Lmcd1Q8VEE1 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Lmcd1Q8VEE1 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Lmcd1Q8VEE1 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Lmcd1Q8VEE1 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC17.61■□□□□ 0.41
Lmcd1Q8VEE1 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
Lmcd1Q8VEE1 Gm26774-201ENSMUST00000181534 2401 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Lmcd1Q8VEE1 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Lmcd1Q8VEE1 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Lmcd1Q8VEE1 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
Lmcd1Q8VEE1 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Lmcd1Q8VEE1 Naa10-203ENSMUST00000114387 979 ntAPPRIS ALT2 TSL 2 BASIC17.6■□□□□ 0.41
Lmcd1Q8VEE1 Meig1-204ENSMUST00000115083 567 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
Lmcd1Q8VEE1 Acyp1-203ENSMUST00000117138 735 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
Lmcd1Q8VEE1 Ms4a6d-202ENSMUST00000125291 679 ntTSL 3 BASIC17.6■□□□□ 0.41
Lmcd1Q8VEE1 Tctn3-202ENSMUST00000132452 1271 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Lmcd1Q8VEE1 Gm34030-202ENSMUST00000211434 1126 ntTSL 5 BASIC17.6■□□□□ 0.41
Lmcd1Q8VEE1 Timm10b-201ENSMUST00000058333 694 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Lmcd1Q8VEE1 Syne4-201ENSMUST00000054594 1355 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
Lmcd1Q8VEE1 Nap1l1-201ENSMUST00000065917 1486 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Lmcd1Q8VEE1 Tmem176a-201ENSMUST00000101426 1540 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Lmcd1Q8VEE1 Slc25a11-201ENSMUST00000014750 1711 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Lmcd1Q8VEE1 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC17.6■□□□□ 0.41
Lmcd1Q8VEE1 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Lmcd1Q8VEE1 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Lmcd1Q8VEE1 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 42.1 ms