Protein–RNA interactions for Protein: Q8VC34

Rpap2, Putative RNA polymerase II subunit B1 CTD phosphatase Rpap2, mousemouse

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpap2Q8VC34 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Rpap2Q8VC34 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Rpap2Q8VC34 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Rpap2Q8VC34 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Rpap2Q8VC34 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Rpap2Q8VC34 Zfp512b-201ENSMUST00000108789 5714 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Rpap2Q8VC34 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
Rpap2Q8VC34 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Rpap2Q8VC34 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
Rpap2Q8VC34 Coq7-201ENSMUST00000032887 914 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Rpap2Q8VC34 C530025M09Rik-201ENSMUST00000099264 690 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
Rpap2Q8VC34 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
Rpap2Q8VC34 Mybl2-201ENSMUST00000018005 3651 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Rpap2Q8VC34 St8sia5-201ENSMUST00000075290 1841 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Rpap2Q8VC34 Cfap206-201ENSMUST00000029971 2246 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.5
Rpap2Q8VC34 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC18.21■□□□□ 0.5
Rpap2Q8VC34 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
Rpap2Q8VC34 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Rpap2Q8VC34 Nfe2-208ENSMUST00000149111 1878 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Rpap2Q8VC34 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Rpap2Q8VC34 Gatc-201ENSMUST00000139167 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Rpap2Q8VC34 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Rpap2Q8VC34 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC18.2■□□□□ 0.5
Rpap2Q8VC34 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Rpap2Q8VC34 Nudt1-201ENSMUST00000050205 954 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Rpap2Q8VC34 Rln3-201ENSMUST00000061923 634 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Rpap2Q8VC34 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Rpap2Q8VC34 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Rpap2Q8VC34 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
Rpap2Q8VC34 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
Rpap2Q8VC34 Rbm12b2-202ENSMUST00000095143 3147 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Rpap2Q8VC34 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Rpap2Q8VC34 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
Rpap2Q8VC34 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
Rpap2Q8VC34 Dok5-201ENSMUST00000029075 1768 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Rpap2Q8VC34 Lhfp-203ENSMUST00000147139 1932 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
Rpap2Q8VC34 Anks1b-219ENSMUST00000182600 1697 ntTSL 5 BASIC18.19■□□□□ 0.5
Rpap2Q8VC34 Fbxl21-201ENSMUST00000045428 1965 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Rpap2Q8VC34 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
Rpap2Q8VC34 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Rpap2Q8VC34 Gm13836-201ENSMUST00000121159 501 ntBASIC18.19■□□□□ 0.5
Rpap2Q8VC34 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
Rpap2Q8VC34 Pyy-201ENSMUST00000017455 555 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
Rpap2Q8VC34 Gm26663-201ENSMUST00000181105 1882 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Rpap2Q8VC34 Gm26827-201ENSMUST00000181911 148 ntTSL 5 BASIC18.19■□□□□ 0.5
Rpap2Q8VC34 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Rpap2Q8VC34 Asic2-201ENSMUST00000021045 3436 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Rpap2Q8VC34 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC18.19■□□□□ 0.5
Rpap2Q8VC34 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
Rpap2Q8VC34 Cnppd1-208ENSMUST00000190679 2062 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Rpap2Q8VC34 Mis18bp1-208ENSMUST00000222244 2053 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Rpap2Q8VC34 Abhd16a-201ENSMUST00000007251 1945 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Rpap2Q8VC34 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Rpap2Q8VC34 Mfsd4b3-201ENSMUST00000095749 1787 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Rpap2Q8VC34 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Rpap2Q8VC34 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Rpap2Q8VC34 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Rpap2Q8VC34 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
Rpap2Q8VC34 Eda-203ENSMUST00000113776 5105 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Rpap2Q8VC34 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Rpap2Q8VC34 Synpo-205ENSMUST00000130044 4970 ntAPPRIS P3 TSL 2 BASIC18.19■□□□□ 0.5
Rpap2Q8VC34 Elf2-202ENSMUST00000091144 2366 ntTSL 5 BASIC18.18■□□□□ 0.5
Rpap2Q8VC34 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC18.18■□□□□ 0.5
Rpap2Q8VC34 Impdh1-202ENSMUST00000159124 2600 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Rpap2Q8VC34 Nudt21-204ENSMUST00000212981 1184 ntTSL 3 BASIC18.18■□□□□ 0.5
Rpap2Q8VC34 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Rpap2Q8VC34 Abcg5-202ENSMUST00000163375 1613 ntTSL 5 BASIC18.18■□□□□ 0.5
Rpap2Q8VC34 Sclt1-201ENSMUST00000026866 3005 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
Rpap2Q8VC34 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC18.18■□□□□ 0.5
Rpap2Q8VC34 Map4k5-201ENSMUST00000049239 4452 ntAPPRIS ALT1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Rpap2Q8VC34 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Rpap2Q8VC34 Krt84-201ENSMUST00000023720 2570 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Rpap2Q8VC34 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Rpap2Q8VC34 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Rpap2Q8VC34 Rgs3-203ENSMUST00000098031 2072 ntAPPRIS ALT1 TSL 5 BASIC18.18■□□□□ 0.5
Rpap2Q8VC34 Lrp5-201ENSMUST00000025856 5161 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Rpap2Q8VC34 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
Rpap2Q8VC34 Rsph6a-202ENSMUST00000076887 1580 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Rpap2Q8VC34 Slc25a20-201ENSMUST00000035222 1783 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Rpap2Q8VC34 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
Rpap2Q8VC34 Ube2e1-201ENSMUST00000022296 1408 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Rpap2Q8VC34 Plekha4-202ENSMUST00000209517 2577 ntAPPRIS P2 TSL 5 BASIC18.17■□□□□ 0.5
Rpap2Q8VC34 Dcdc2c-206ENSMUST00000221349 2209 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
Rpap2Q8VC34 Znhit2-201ENSMUST00000162726 1281 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
Rpap2Q8VC34 Fbxo6-208ENSMUST00000168503 1240 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
Rpap2Q8VC34 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC18.17■□□□□ 0.5
Rpap2Q8VC34 Cryl1-201ENSMUST00000022517 1497 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Rpap2Q8VC34 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Rpap2Q8VC34 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Rpap2Q8VC34 Ormdl3-201ENSMUST00000052919 2184 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Rpap2Q8VC34 Dyx1c1-201ENSMUST00000034734 1975 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
Rpap2Q8VC34 Tatdn2-202ENSMUST00000113022 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Rpap2Q8VC34 Dab2-208ENSMUST00000160134 1374 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
Rpap2Q8VC34 Pcmt1-202ENSMUST00000159917 2491 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
Rpap2Q8VC34 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Rpap2Q8VC34 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Rpap2Q8VC34 Iqgap2-201ENSMUST00000068603 5771 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Rpap2Q8VC34 Zdhhc1-203ENSMUST00000212303 2056 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Rpap2Q8VC34 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Rpap2Q8VC34 Ccdc184-201ENSMUST00000031914 2329 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 18.6 ms