Protein–RNA interactions for Protein: Q8R5L3

Vps39, Vam6/Vps39-like protein, mousemouse

Predictions only

Length 886 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps39Q8R5L3 Dsg2-201ENSMUST00000059787 5766 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Vps39Q8R5L3 Tead3-201ENSMUST00000114799 2448 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Vps39Q8R5L3 Rab27b-202ENSMUST00000117692 2842 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Vps39Q8R5L3 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Vps39Q8R5L3 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Vps39Q8R5L3 Bmt2-202ENSMUST00000203078 4462 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Vps39Q8R5L3 Shank1-201ENSMUST00000107934 6477 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
Vps39Q8R5L3 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC16.61■□□□□ 0.25
Vps39Q8R5L3 Dlx1-201ENSMUST00000037119 4111 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Vps39Q8R5L3 Zfp281-202ENSMUST00000112046 4937 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Vps39Q8R5L3 Shank3-202ENSMUST00000066545 4702 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Vps39Q8R5L3 Hps6-201ENSMUST00000099393 2696 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
Vps39Q8R5L3 Mal-202ENSMUST00000028854 2778 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Vps39Q8R5L3 Eda-209ENSMUST00000113783 4930 ntTSL 5 BASIC16.6■□□□□ 0.25
Vps39Q8R5L3 Plekha8-202ENSMUST00000119706 6739 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
Vps39Q8R5L3 Asph-210ENSMUST00000108337 2836 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Vps39Q8R5L3 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Vps39Q8R5L3 Pqlc1-202ENSMUST00000091798 1989 ntAPPRIS P3 TSL 5 BASIC16.6■□□□□ 0.25
Vps39Q8R5L3 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Vps39Q8R5L3 Spata6-201ENSMUST00000038868 2466 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Vps39Q8R5L3 Rnls-201ENSMUST00000096114 1597 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Vps39Q8R5L3 Ado-201ENSMUST00000075686 4445 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
Vps39Q8R5L3 Krt84-201ENSMUST00000023720 2570 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Vps39Q8R5L3 Simc1-201ENSMUST00000118072 2116 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
Vps39Q8R5L3 Yipf4-201ENSMUST00000024873 2133 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Vps39Q8R5L3 Zbtb25-201ENSMUST00000167011 1681 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
Vps39Q8R5L3 Ror1-201ENSMUST00000039630 5762 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Vps39Q8R5L3 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC16.6■□□□□ 0.25
Vps39Q8R5L3 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Vps39Q8R5L3 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC16.6■□□□□ 0.25
Vps39Q8R5L3 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Vps39Q8R5L3 Mir5122-201ENSMUST00000175004 89 ntBASIC16.6■□□□□ 0.25
Vps39Q8R5L3 Gm5297-201ENSMUST00000198555 1171 ntBASIC16.6■□□□□ 0.25
Vps39Q8R5L3 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC16.6■□□□□ 0.25
Vps39Q8R5L3 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Vps39Q8R5L3 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC16.6■□□□□ 0.25
Vps39Q8R5L3 Gzmd-201ENSMUST00000082093 964 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Vps39Q8R5L3 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC16.6■□□□□ 0.25
Vps39Q8R5L3 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
Vps39Q8R5L3 Klhl40-201ENSMUST00000098272 2370 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Vps39Q8R5L3 Zbtb7c-201ENSMUST00000058997 4569 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Vps39Q8R5L3 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Vps39Q8R5L3 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Vps39Q8R5L3 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC16.6■□□□□ 0.25
Vps39Q8R5L3 AC154855.1-201ENSMUST00000227353 1458 ntBASIC16.6■□□□□ 0.25
Vps39Q8R5L3 Evc-202ENSMUST00000114148 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Vps39Q8R5L3 Ndufs2-202ENSMUST00000111318 1545 ntTSL 5 BASIC16.6■□□□□ 0.25
Vps39Q8R5L3 AC154231.1-201ENSMUST00000220564 2175 ntBASIC16.6■□□□□ 0.25
Vps39Q8R5L3 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
Vps39Q8R5L3 Sfmbt1-201ENSMUST00000054230 7837 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
Vps39Q8R5L3 Lats1-202ENSMUST00000165952 7209 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Vps39Q8R5L3 Clcn3-203ENSMUST00000093490 5518 ntAPPRIS ALT1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Vps39Q8R5L3 Nploc4-201ENSMUST00000044271 4121 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Vps39Q8R5L3 Glt28d2-201ENSMUST00000033643 2732 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Vps39Q8R5L3 Dusp4-201ENSMUST00000033930 2740 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Vps39Q8R5L3 Zfp367-202ENSMUST00000117241 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Vps39Q8R5L3 E230025N22Rik-201ENSMUST00000115682 2016 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Vps39Q8R5L3 Pld2-201ENSMUST00000018429 3659 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
Vps39Q8R5L3 Gm10435-202ENSMUST00000162526 2878 ntTSL 5 BASIC16.59■□□□□ 0.25
Vps39Q8R5L3 Rgs3-203ENSMUST00000098031 2072 ntAPPRIS ALT1 TSL 5 BASIC16.59■□□□□ 0.25
Vps39Q8R5L3 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC16.59■□□□□ 0.25
Vps39Q8R5L3 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Vps39Q8R5L3 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC16.59■□□□□ 0.25
Vps39Q8R5L3 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Vps39Q8R5L3 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Vps39Q8R5L3 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Vps39Q8R5L3 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
Vps39Q8R5L3 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Vps39Q8R5L3 Dnajc25-201ENSMUST00000095070 4023 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Vps39Q8R5L3 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Vps39Q8R5L3 Gabrb3-201ENSMUST00000039697 5579 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Vps39Q8R5L3 Osbpl1a-208ENSMUST00000121888 2674 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Vps39Q8R5L3 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Vps39Q8R5L3 Pde8b-208ENSMUST00000162292 4235 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Vps39Q8R5L3 Pacs1-201ENSMUST00000025786 4339 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Vps39Q8R5L3 Wnk1-202ENSMUST00000060043 10575 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
Vps39Q8R5L3 Cul1-201ENSMUST00000031697 3161 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Vps39Q8R5L3 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Vps39Q8R5L3 Elf2-202ENSMUST00000091144 2366 ntTSL 5 BASIC16.58■□□□□ 0.25
Vps39Q8R5L3 Gabra5-202ENSMUST00000206382 2607 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.25
Vps39Q8R5L3 Sacs-204ENSMUST00000121091 4581 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.25
Vps39Q8R5L3 Fancg-201ENSMUST00000030165 2771 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Vps39Q8R5L3 Wdr1-201ENSMUST00000005234 3089 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Vps39Q8R5L3 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC16.58■□□□□ 0.24
Vps39Q8R5L3 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Vps39Q8R5L3 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC16.58■□□□□ 0.24
Vps39Q8R5L3 AC135963.1-201ENSMUST00000211640 717 ntBASIC16.58■□□□□ 0.24
Vps39Q8R5L3 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC16.58■□□□□ 0.24
Vps39Q8R5L3 5830415G21Rik-201ENSMUST00000192543 1332 ntBASIC16.58■□□□□ 0.24
Vps39Q8R5L3 Wnt10b-204ENSMUST00000226655 1807 ntBASIC16.58■□□□□ 0.24
Vps39Q8R5L3 Hap1-201ENSMUST00000103124 2120 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
Vps39Q8R5L3 Prss53-201ENSMUST00000121394 2134 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Vps39Q8R5L3 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Vps39Q8R5L3 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Vps39Q8R5L3 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Vps39Q8R5L3 Nfe2l3-201ENSMUST00000005103 2544 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Vps39Q8R5L3 Nptx2-201ENSMUST00000071782 2536 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Vps39Q8R5L3 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Vps39Q8R5L3 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Vps39Q8R5L3 Lonp2-201ENSMUST00000034141 2860 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 27.1 ms