Protein–RNA interactions for Protein: Q8R4E9

Cdt1, DNA replication factor Cdt1, mousemouse

Predictions only

Length 557 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdt1Q8R4E9 Fhl1-203ENSMUST00000114769 2770 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Cdt1Q8R4E9 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Cdt1Q8R4E9 Gm26917-202ENSMUST00000192833 3329 ntBASIC16.04■□□□□ 0.16
Cdt1Q8R4E9 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Cdt1Q8R4E9 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Cdt1Q8R4E9 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Cdt1Q8R4E9 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Cdt1Q8R4E9 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
Cdt1Q8R4E9 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Cdt1Q8R4E9 Spsb2-203ENSMUST00000112473 1322 ntBASIC16.04■□□□□ 0.16
Cdt1Q8R4E9 Gna12-201ENSMUST00000000153 3416 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Cdt1Q8R4E9 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Cdt1Q8R4E9 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC16.04■□□□□ 0.16
Cdt1Q8R4E9 Mir1668-201ENSMUST00000184114 107 ntBASIC16.04■□□□□ 0.16
Cdt1Q8R4E9 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
Cdt1Q8R4E9 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Cdt1Q8R4E9 Lce1a2-201ENSMUST00000029530 715 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Cdt1Q8R4E9 Olfr317-201ENSMUST00000075607 1128 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
Cdt1Q8R4E9 Taar2-201ENSMUST00000079134 1020 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Cdt1Q8R4E9 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Cdt1Q8R4E9 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Cdt1Q8R4E9 Gm26596-201ENSMUST00000180464 2655 ntBASIC16.04■□□□□ 0.16
Cdt1Q8R4E9 Shisa2-201ENSMUST00000053949 3119 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Cdt1Q8R4E9 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Cdt1Q8R4E9 Map4k5-201ENSMUST00000049239 4452 ntAPPRIS ALT1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Cdt1Q8R4E9 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Cdt1Q8R4E9 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
Cdt1Q8R4E9 Pcmt1-202ENSMUST00000159917 2491 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
Cdt1Q8R4E9 Slc25a23-201ENSMUST00000040280 3362 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Cdt1Q8R4E9 Zdhhc2-201ENSMUST00000049389 3381 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Cdt1Q8R4E9 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC16.04■□□□□ 0.16
Cdt1Q8R4E9 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC16.03■□□□□ 0.16
Cdt1Q8R4E9 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Cdt1Q8R4E9 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Cdt1Q8R4E9 Nat8f3-202ENSMUST00000168531 1347 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Cdt1Q8R4E9 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC16.03■□□□□ 0.16
Cdt1Q8R4E9 Rab35-201ENSMUST00000031492 2820 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Cdt1Q8R4E9 Ube2i-207ENSMUST00000172868 2755 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Cdt1Q8R4E9 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC16.03■□□□□ 0.16
Cdt1Q8R4E9 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Cdt1Q8R4E9 Tomm22-201ENSMUST00000023062 1031 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Cdt1Q8R4E9 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Cdt1Q8R4E9 Guf1-202ENSMUST00000087228 3433 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Cdt1Q8R4E9 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Cdt1Q8R4E9 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
Cdt1Q8R4E9 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Cdt1Q8R4E9 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Cdt1Q8R4E9 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Cdt1Q8R4E9 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Cdt1Q8R4E9 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC16.03■□□□□ 0.16
Cdt1Q8R4E9 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Cdt1Q8R4E9 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC16.02■□□□□ 0.16
Cdt1Q8R4E9 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Cdt1Q8R4E9 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
Cdt1Q8R4E9 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.16
Cdt1Q8R4E9 Stk35-202ENSMUST00000166282 5445 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Cdt1Q8R4E9 Fdps-203ENSMUST00000196709 1382 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
Cdt1Q8R4E9 Mepce-201ENSMUST00000031740 3128 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Cdt1Q8R4E9 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Cdt1Q8R4E9 Wasf1-202ENSMUST00000105509 2719 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
Cdt1Q8R4E9 Gm18958-201ENSMUST00000174258 762 ntBASIC16.02■□□□□ 0.16
Cdt1Q8R4E9 Gm26821-201ENSMUST00000181954 2652 ntTSL 5 BASIC16.02■□□□□ 0.16
Cdt1Q8R4E9 Zfp512b-201ENSMUST00000108789 5714 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Cdt1Q8R4E9 Foxp4-203ENSMUST00000113263 3156 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.15
Cdt1Q8R4E9 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC16.02■□□□□ 0.15
Cdt1Q8R4E9 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.15
Cdt1Q8R4E9 Kank3-202ENSMUST00000172649 2652 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
Cdt1Q8R4E9 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Cdt1Q8R4E9 2610301B20Rik-201ENSMUST00000080517 2116 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Cdt1Q8R4E9 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Cdt1Q8R4E9 Kcnq2-201ENSMUST00000016491 3067 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Cdt1Q8R4E9 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC16.01■□□□□ 0.15
Cdt1Q8R4E9 9130024F11Rik-201ENSMUST00000135238 1300 ntTSL 2 BASIC16.01■□□□□ 0.15
Cdt1Q8R4E9 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Cdt1Q8R4E9 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Cdt1Q8R4E9 Mybl2-201ENSMUST00000018005 3651 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Cdt1Q8R4E9 Rnf186-201ENSMUST00000116094 1249 ntAPPRIS P1 BASIC16.01■□□□□ 0.15
Cdt1Q8R4E9 Gm7213-201ENSMUST00000215977 950 ntBASIC16.01■□□□□ 0.15
Cdt1Q8R4E9 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Cdt1Q8R4E9 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC16.01■□□□□ 0.15
Cdt1Q8R4E9 H2-D1-202ENSMUST00000172785 2102 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Cdt1Q8R4E9 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Cdt1Q8R4E9 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
Cdt1Q8R4E9 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Cdt1Q8R4E9 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Cdt1Q8R4E9 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Cdt1Q8R4E9 Jmy-201ENSMUST00000065537 8776 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Cdt1Q8R4E9 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC16.01■□□□□ 0.15
Cdt1Q8R4E9 Pdcl3-201ENSMUST00000027247 3914 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Cdt1Q8R4E9 Wdr1-201ENSMUST00000005234 3089 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Cdt1Q8R4E9 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Cdt1Q8R4E9 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
Cdt1Q8R4E9 Poglut1-201ENSMUST00000036210 2758 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Cdt1Q8R4E9 Csk-201ENSMUST00000034863 2749 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Cdt1Q8R4E9 Rab6a-202ENSMUST00000098252 3110 ntAPPRIS ALT1 TSL 1 (best) BASIC16■□□□□ 0.15
Cdt1Q8R4E9 Mir3081-201ENSMUST00000175305 84 ntBASIC16■□□□□ 0.15
Cdt1Q8R4E9 Mthfsl-204ENSMUST00000186863 725 ntTSL 2 BASIC16■□□□□ 0.15
Cdt1Q8R4E9 Rpl19-ps10-201ENSMUST00000205555 330 ntBASIC16■□□□□ 0.15
Cdt1Q8R4E9 Mzt1-203ENSMUST00000227948 952 ntBASIC16■□□□□ 0.15
Cdt1Q8R4E9 Mrpl14-201ENSMUST00000024734 645 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Retrieved 100 of 76,532 protein–RNA pairs in 23.8 ms