Protein–RNA interactions for Protein: Q8R2G6

Ccdc80, Coiled-coil domain-containing protein 80, mousemouse

Predictions only

Length 949 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc80Q8R2G6 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Ccdc80Q8R2G6 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
Ccdc80Q8R2G6 Rffl-202ENSMUST00000071152 3633 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Ccdc80Q8R2G6 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
Ccdc80Q8R2G6 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC16.27■□□□□ 0.2
Ccdc80Q8R2G6 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC16.27■□□□□ 0.2
Ccdc80Q8R2G6 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Ccdc80Q8R2G6 Gm7291-201ENSMUST00000199147 382 ntBASIC16.27■□□□□ 0.2
Ccdc80Q8R2G6 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
Ccdc80Q8R2G6 Ntrk2-205ENSMUST00000224402 2284 ntBASIC16.27■□□□□ 0.2
Ccdc80Q8R2G6 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Ccdc80Q8R2G6 Mindy4-203ENSMUST00000204842 2211 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
Ccdc80Q8R2G6 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC16.27■□□□□ 0.19
Ccdc80Q8R2G6 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Ccdc80Q8R2G6 Dtx3-204ENSMUST00000130855 1925 ntAPPRIS ALT1 TSL 5 BASIC16.27■□□□□ 0.19
Ccdc80Q8R2G6 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Ccdc80Q8R2G6 Agrn-206ENSMUST00000180572 6891 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.19
Ccdc80Q8R2G6 Ptbp2-213ENSMUST00000200097 3777 ntAPPRIS ALT1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Ccdc80Q8R2G6 Faf1-201ENSMUST00000102724 4468 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Ccdc80Q8R2G6 Btd-201ENSMUST00000090147 2324 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Ccdc80Q8R2G6 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC16.26■□□□□ 0.19
Ccdc80Q8R2G6 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Ccdc80Q8R2G6 Tle2-205ENSMUST00000135211 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Ccdc80Q8R2G6 Samd14-201ENSMUST00000055947 3318 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Ccdc80Q8R2G6 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Ccdc80Q8R2G6 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Ccdc80Q8R2G6 Mydgf-201ENSMUST00000019723 1710 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Ccdc80Q8R2G6 Fam151a-201ENSMUST00000047620 1923 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Ccdc80Q8R2G6 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Ccdc80Q8R2G6 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
Ccdc80Q8R2G6 Gm7290-201ENSMUST00000104990 617 ntBASIC16.26■□□□□ 0.19
Ccdc80Q8R2G6 Gm12918-201ENSMUST00000120234 636 ntBASIC16.26■□□□□ 0.19
Ccdc80Q8R2G6 Gm15710-201ENSMUST00000121821 636 ntBASIC16.26■□□□□ 0.19
Ccdc80Q8R2G6 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Ccdc80Q8R2G6 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Ccdc80Q8R2G6 Gm5075-201ENSMUST00000196916 622 ntBASIC16.26■□□□□ 0.19
Ccdc80Q8R2G6 Gm29791-202ENSMUST00000207888 369 ntBASIC16.26■□□□□ 0.19
Ccdc80Q8R2G6 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC16.26■□□□□ 0.19
Ccdc80Q8R2G6 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC16.26■□□□□ 0.19
Ccdc80Q8R2G6 Gm5874-201ENSMUST00000096101 508 ntBASIC16.26■□□□□ 0.19
Ccdc80Q8R2G6 Stx7-201ENSMUST00000020174 2502 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Ccdc80Q8R2G6 Antxr2-201ENSMUST00000031281 5656 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Ccdc80Q8R2G6 Grwd1-201ENSMUST00000107723 1898 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Ccdc80Q8R2G6 Hhatl-201ENSMUST00000035110 1870 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Ccdc80Q8R2G6 2510009E07Rik-201ENSMUST00000053336 5164 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Ccdc80Q8R2G6 Ly6e-201ENSMUST00000051698 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Ccdc80Q8R2G6 Gm43352-201ENSMUST00000196419 3065 ntBASIC16.26■□□□□ 0.19
Ccdc80Q8R2G6 Hsph1-209ENSMUST00000202089 3054 ntTSL 5 BASIC16.26■□□□□ 0.19
Ccdc80Q8R2G6 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Ccdc80Q8R2G6 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC16.26■□□□□ 0.19
Ccdc80Q8R2G6 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Ccdc80Q8R2G6 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Ccdc80Q8R2G6 Hs3st5-201ENSMUST00000058738 3078 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Ccdc80Q8R2G6 Gm44616-201ENSMUST00000206417 1732 ntBASIC16.25■□□□□ 0.19
Ccdc80Q8R2G6 Dcaf17-203ENSMUST00000112159 2490 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Ccdc80Q8R2G6 Flrt2-202ENSMUST00000110117 3223 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Ccdc80Q8R2G6 Usp35-202ENSMUST00000168435 3982 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
Ccdc80Q8R2G6 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC16.25■□□□□ 0.19
Ccdc80Q8R2G6 Adgrl1-210ENSMUST00000152978 5734 ntTSL 5 BASIC16.25■□□□□ 0.19
Ccdc80Q8R2G6 Trmt1-201ENSMUST00000001974 2567 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
Ccdc80Q8R2G6 Col2a1-201ENSMUST00000023123 5104 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Ccdc80Q8R2G6 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Ccdc80Q8R2G6 Gm2399-201ENSMUST00000104944 225 ntBASIC16.25■□□□□ 0.19
Ccdc80Q8R2G6 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
Ccdc80Q8R2G6 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC16.25■□□□□ 0.19
Ccdc80Q8R2G6 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC16.25■□□□□ 0.19
Ccdc80Q8R2G6 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Ccdc80Q8R2G6 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Ccdc80Q8R2G6 Zfp783-201ENSMUST00000095946 670 ntBASIC16.25■□□□□ 0.19
Ccdc80Q8R2G6 Tjap1-214ENSMUST00000225413 2189 ntAPPRIS ALT2 BASIC16.25■□□□□ 0.19
Ccdc80Q8R2G6 Fut7-203ENSMUST00000114278 1990 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
Ccdc80Q8R2G6 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Ccdc80Q8R2G6 Fut7-201ENSMUST00000041654 1970 ntAPPRIS P3 TSL 5 BASIC16.25■□□□□ 0.19
Ccdc80Q8R2G6 Usp31-201ENSMUST00000046929 10198 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
Ccdc80Q8R2G6 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Ccdc80Q8R2G6 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
Ccdc80Q8R2G6 Gpsm1-202ENSMUST00000066936 3384 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
Ccdc80Q8R2G6 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Ccdc80Q8R2G6 Slc7a7-209ENSMUST00000226753 2126 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
Ccdc80Q8R2G6 Usp43-202ENSMUST00000108677 4447 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Ccdc80Q8R2G6 Stard5-201ENSMUST00000075418 2483 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Ccdc80Q8R2G6 Clstn1-201ENSMUST00000039144 3319 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
Ccdc80Q8R2G6 Mcrs1-201ENSMUST00000041190 1915 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Ccdc80Q8R2G6 P2ry6-201ENSMUST00000060174 1946 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Ccdc80Q8R2G6 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Ccdc80Q8R2G6 BC024978-204ENSMUST00000179391 1748 ntAPPRIS P3 TSL 5 BASIC16.25■□□□□ 0.19
Ccdc80Q8R2G6 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Ccdc80Q8R2G6 Fam214b-204ENSMUST00000107958 3280 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Ccdc80Q8R2G6 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Ccdc80Q8R2G6 Tmem214-201ENSMUST00000114716 2220 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
Ccdc80Q8R2G6 G3bp2-204ENSMUST00000169094 2716 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
Ccdc80Q8R2G6 Zfc3h1-201ENSMUST00000036044 6957 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Ccdc80Q8R2G6 Gpd2-202ENSMUST00000112618 5759 ntTSL 5 BASIC16.24■□□□□ 0.19
Ccdc80Q8R2G6 Snph-203ENSMUST00000109875 4910 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
Ccdc80Q8R2G6 Sync-201ENSMUST00000102599 2042 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Ccdc80Q8R2G6 Vangl2-202ENSMUST00000111263 6528 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
Ccdc80Q8R2G6 Ush1g-201ENSMUST00000103037 3306 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Ccdc80Q8R2G6 Ttll3-202ENSMUST00000038889 3114 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
Ccdc80Q8R2G6 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Ccdc80Q8R2G6 AC108858.1-201ENSMUST00000228461 1498 ntBASIC16.24■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 28.6 ms