Protein–RNA interactions for Protein: Q8R1F9

Rpp40, Ribonuclease P protein subunit p40, mousemouse

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpp40Q8R1F9 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC17.77■□□□□ 0.43
Rpp40Q8R1F9 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.43
Rpp40Q8R1F9 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
Rpp40Q8R1F9 Gm15442-201ENSMUST00000117905 1527 ntBASIC17.77■□□□□ 0.43
Rpp40Q8R1F9 Jam2-201ENSMUST00000098407 1998 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
Rpp40Q8R1F9 Agk-201ENSMUST00000031977 2531 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Rpp40Q8R1F9 Dok5-201ENSMUST00000029075 1768 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Rpp40Q8R1F9 Fcgrt-203ENSMUST00000210642 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Rpp40Q8R1F9 1700025L06Rik-203ENSMUST00000211477 1623 ntTSL 5 BASIC17.76■□□□□ 0.43
Rpp40Q8R1F9 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC17.76■□□□□ 0.43
Rpp40Q8R1F9 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Rpp40Q8R1F9 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
Rpp40Q8R1F9 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Rpp40Q8R1F9 Gm19439-201ENSMUST00000198195 2273 ntBASIC17.76■□□□□ 0.43
Rpp40Q8R1F9 Prss53-201ENSMUST00000121394 2134 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Rpp40Q8R1F9 Olfr129-201ENSMUST00000122318 993 ntBASIC17.76■□□□□ 0.43
Rpp40Q8R1F9 4930401G09Rik-201ENSMUST00000139500 637 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Rpp40Q8R1F9 Gm15890-201ENSMUST00000161024 770 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Rpp40Q8R1F9 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Rpp40Q8R1F9 Ppp1r27-201ENSMUST00000026121 771 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Rpp40Q8R1F9 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Rpp40Q8R1F9 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Rpp40Q8R1F9 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Rpp40Q8R1F9 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Rpp40Q8R1F9 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Rpp40Q8R1F9 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC17.76■□□□□ 0.43
Rpp40Q8R1F9 Lonp2-201ENSMUST00000034141 2860 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Rpp40Q8R1F9 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Rpp40Q8R1F9 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Rpp40Q8R1F9 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Rpp40Q8R1F9 Grwd1-201ENSMUST00000107723 1898 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Rpp40Q8R1F9 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC17.75■□□□□ 0.43
Rpp40Q8R1F9 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Rpp40Q8R1F9 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Rpp40Q8R1F9 Adamtsl1-201ENSMUST00000048885 1842 ntTSL 5 BASIC17.75■□□□□ 0.43
Rpp40Q8R1F9 Sh3glb1-205ENSMUST00000199854 1416 ntTSL 5 BASIC17.75■□□□□ 0.43
Rpp40Q8R1F9 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Rpp40Q8R1F9 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Rpp40Q8R1F9 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Rpp40Q8R1F9 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC17.75■□□□□ 0.43
Rpp40Q8R1F9 AC125350.1-201ENSMUST00000225115 903 ntBASIC17.75■□□□□ 0.43
Rpp40Q8R1F9 3110040N11Rik-201ENSMUST00000026092 887 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Rpp40Q8R1F9 Ube2t-201ENSMUST00000027687 1116 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Rpp40Q8R1F9 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Rpp40Q8R1F9 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Rpp40Q8R1F9 Tm9sf1-205ENSMUST00000122358 2517 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Rpp40Q8R1F9 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
Rpp40Q8R1F9 Gm8839-201ENSMUST00000121279 1645 ntBASIC17.75■□□□□ 0.43
Rpp40Q8R1F9 Slc39a1-201ENSMUST00000015467 2364 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Rpp40Q8R1F9 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Rpp40Q8R1F9 Coro1a-202ENSMUST00000106364 1747 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Rpp40Q8R1F9 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
Rpp40Q8R1F9 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Rpp40Q8R1F9 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Rpp40Q8R1F9 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Rpp40Q8R1F9 Gm9954-202ENSMUST00000198686 4725 ntBASIC17.74■□□□□ 0.43
Rpp40Q8R1F9 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
Rpp40Q8R1F9 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Rpp40Q8R1F9 Ighv6-1-201ENSMUST00000193612 343 ntBASIC17.74■□□□□ 0.43
Rpp40Q8R1F9 D030044L04Rik-201ENSMUST00000204220 1291 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Rpp40Q8R1F9 Alkbh2-201ENSMUST00000053657 1073 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Rpp40Q8R1F9 Cebpzos-201ENSMUST00000063817 753 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
Rpp40Q8R1F9 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Rpp40Q8R1F9 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC17.74■□□□□ 0.43
Rpp40Q8R1F9 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Rpp40Q8R1F9 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Rpp40Q8R1F9 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
Rpp40Q8R1F9 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Rpp40Q8R1F9 Bnipl-201ENSMUST00000098871 1414 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Rpp40Q8R1F9 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Rpp40Q8R1F9 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
Rpp40Q8R1F9 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC17.73■□□□□ 0.43
Rpp40Q8R1F9 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
Rpp40Q8R1F9 Sirt7-202ENSMUST00000106183 427 ntTSL 3 BASIC17.73■□□□□ 0.43
Rpp40Q8R1F9 Dbndd2-204ENSMUST00000109350 1055 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
Rpp40Q8R1F9 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Rpp40Q8R1F9 Atp6v1g2-203ENSMUST00000130992 524 ntTSL 2 BASIC17.73■□□□□ 0.43
Rpp40Q8R1F9 Ctsg-201ENSMUST00000015583 1002 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Rpp40Q8R1F9 Otx2os1-206ENSMUST00000228153 787 ntBASIC17.73■□□□□ 0.43
Rpp40Q8R1F9 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Rpp40Q8R1F9 Kcng4-202ENSMUST00000164382 1875 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
Rpp40Q8R1F9 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
Rpp40Q8R1F9 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC17.73■□□□□ 0.43
Rpp40Q8R1F9 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Rpp40Q8R1F9 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
Rpp40Q8R1F9 Casp8-204ENSMUST00000191201 1849 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
Rpp40Q8R1F9 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Rpp40Q8R1F9 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Rpp40Q8R1F9 Dok4-201ENSMUST00000046461 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Rpp40Q8R1F9 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Rpp40Q8R1F9 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
Rpp40Q8R1F9 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Rpp40Q8R1F9 Mettl27-204ENSMUST00000111219 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Rpp40Q8R1F9 Anks1b-219ENSMUST00000182600 1697 ntTSL 5 BASIC17.72■□□□□ 0.43
Rpp40Q8R1F9 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Rpp40Q8R1F9 Apopt1-204ENSMUST00000163220 671 ntAPPRIS ALT2 TSL 2 BASIC17.72■□□□□ 0.43
Rpp40Q8R1F9 Hist1h2bc-201ENSMUST00000018246 1156 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Rpp40Q8R1F9 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Rpp40Q8R1F9 Hist1h2ba-201ENSMUST00000052776 384 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
Rpp40Q8R1F9 Gnaz-201ENSMUST00000037813 3519 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 34 ms