Protein–RNA interactions for Protein: Q8CI96

Clip4, CAP-Gly domain-containing linker protein 4, mousemouse

Predictions only

Length 704 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clip4Q8CI96 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Clip4Q8CI96 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Clip4Q8CI96 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Clip4Q8CI96 Gch1-201ENSMUST00000089959 2775 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Clip4Q8CI96 Gabpa-201ENSMUST00000009120 4987 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Clip4Q8CI96 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC16.74■□□□□ 0.27
Clip4Q8CI96 Lrrfip2-201ENSMUST00000035078 3260 ntTSL 5 BASIC16.74■□□□□ 0.27
Clip4Q8CI96 Rfx7-202ENSMUST00000163401 7880 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
Clip4Q8CI96 Adgrb2-204ENSMUST00000106015 4982 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Clip4Q8CI96 Dph1-201ENSMUST00000044949 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Clip4Q8CI96 Camk2n1-201ENSMUST00000050918 4444 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Clip4Q8CI96 Cnppd1-208ENSMUST00000190679 2062 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Clip4Q8CI96 Pou2f2-201ENSMUST00000098679 2340 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Clip4Q8CI96 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Clip4Q8CI96 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC16.73■□□□□ 0.27
Clip4Q8CI96 Gm10231-201ENSMUST00000181584 441 ntBASIC16.73■□□□□ 0.27
Clip4Q8CI96 Atp5g2-202ENSMUST00000185641 731 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Clip4Q8CI96 Gm10175-202ENSMUST00000208752 441 ntBASIC16.73■□□□□ 0.27
Clip4Q8CI96 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC16.73■□□□□ 0.27
Clip4Q8CI96 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC16.73■□□□□ 0.27
Clip4Q8CI96 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Clip4Q8CI96 Olfr464-201ENSMUST00000074874 1084 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
Clip4Q8CI96 Atp5g2-201ENSMUST00000075630 441 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Clip4Q8CI96 Nipa2-201ENSMUST00000032635 3197 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Clip4Q8CI96 Usp49-201ENSMUST00000024779 8252 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Clip4Q8CI96 Gm16201-202ENSMUST00000139218 2330 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Clip4Q8CI96 Col11a2-202ENSMUST00000114252 5620 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
Clip4Q8CI96 Gm42918-201ENSMUST00000199249 1580 ntBASIC16.72■□□□□ 0.27
Clip4Q8CI96 Anapc5-201ENSMUST00000086216 2760 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
Clip4Q8CI96 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Clip4Q8CI96 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Clip4Q8CI96 Prr5l-201ENSMUST00000043845 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Clip4Q8CI96 Stambpl1-201ENSMUST00000054956 2024 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Clip4Q8CI96 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Clip4Q8CI96 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Clip4Q8CI96 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Clip4Q8CI96 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Clip4Q8CI96 Syt8-205ENSMUST00000122393 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Clip4Q8CI96 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Clip4Q8CI96 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Clip4Q8CI96 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Clip4Q8CI96 Myoz1-201ENSMUST00000090469 1289 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Clip4Q8CI96 Tmem183a-201ENSMUST00000049470 3149 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Clip4Q8CI96 Xpo4-209ENSMUST00000174545 8680 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Clip4Q8CI96 Txnrd2-215ENSMUST00000206151 2874 ntAPPRIS P2 TSL 5 BASIC16.72■□□□□ 0.27
Clip4Q8CI96 Nptx2-201ENSMUST00000071782 2536 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Clip4Q8CI96 Agtr1a-201ENSMUST00000066412 2199 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Clip4Q8CI96 Tmem260-201ENSMUST00000111735 5485 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
Clip4Q8CI96 BC030336-201ENSMUST00000060175 4831 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Clip4Q8CI96 Zfp318-201ENSMUST00000113481 7850 ntAPPRIS P4 TSL 5 BASIC16.72■□□□□ 0.27
Clip4Q8CI96 Bloc1s3-201ENSMUST00000077408 3188 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Clip4Q8CI96 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Clip4Q8CI96 Gm36858-201ENSMUST00000194501 2391 ntBASIC16.71■□□□□ 0.27
Clip4Q8CI96 Parg-201ENSMUST00000022470 4413 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Clip4Q8CI96 Kbtbd2-201ENSMUST00000114321 3868 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Clip4Q8CI96 Sgsm2-201ENSMUST00000057631 4743 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Clip4Q8CI96 Phtf1-202ENSMUST00000063717 3327 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Clip4Q8CI96 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Clip4Q8CI96 Izumo1r-204ENSMUST00000121116 726 ntTSL 2 BASIC16.71■□□□□ 0.27
Clip4Q8CI96 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC16.71■□□□□ 0.27
Clip4Q8CI96 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC16.71■□□□□ 0.27
Clip4Q8CI96 Gm7791-201ENSMUST00000219066 539 ntBASIC16.71■□□□□ 0.27
Clip4Q8CI96 Scin-201ENSMUST00000002640 2995 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Clip4Q8CI96 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Clip4Q8CI96 Gm16867-201ENSMUST00000179116 3084 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Clip4Q8CI96 Spef1-201ENSMUST00000028801 2328 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Clip4Q8CI96 Dsg2-202ENSMUST00000120102 3590 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Clip4Q8CI96 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Clip4Q8CI96 Usp27x-201ENSMUST00000115744 3240 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
Clip4Q8CI96 Prelid3a-201ENSMUST00000025411 2167 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Clip4Q8CI96 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.26
Clip4Q8CI96 Pcsk5-202ENSMUST00000050715 5783 ntTSL 1 (best) BASIC16.71■□□□□ 0.26
Clip4Q8CI96 Neu1-201ENSMUST00000007253 2474 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
Clip4Q8CI96 Fubp3-202ENSMUST00000113482 3268 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
Clip4Q8CI96 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC16.7■□□□□ 0.26
Clip4Q8CI96 Nipsnap1-201ENSMUST00000038570 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Clip4Q8CI96 Gm10516-201ENSMUST00000180598 2615 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Clip4Q8CI96 Cactin-201ENSMUST00000050867 2715 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Clip4Q8CI96 Ep300-201ENSMUST00000068387 9566 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Clip4Q8CI96 Slc9a6-202ENSMUST00000114784 4449 ntTSL 5 BASIC16.7■□□□□ 0.26
Clip4Q8CI96 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Clip4Q8CI96 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Clip4Q8CI96 Gm2274-201ENSMUST00000184539 609 ntBASIC16.7■□□□□ 0.26
Clip4Q8CI96 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Clip4Q8CI96 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
Clip4Q8CI96 Mios-201ENSMUST00000040017 3710 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Clip4Q8CI96 Mapk7-201ENSMUST00000079080 3019 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Clip4Q8CI96 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Clip4Q8CI96 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Clip4Q8CI96 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Clip4Q8CI96 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Clip4Q8CI96 Spg21-201ENSMUST00000034955 2680 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Clip4Q8CI96 Fam214a-202ENSMUST00000170846 4355 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
Clip4Q8CI96 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Clip4Q8CI96 Fbxo9-202ENSMUST00000085311 2155 ntAPPRIS ALT1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Clip4Q8CI96 Wdr12-202ENSMUST00000117438 3251 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Clip4Q8CI96 Dnajb5-201ENSMUST00000037872 3291 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
Clip4Q8CI96 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
Clip4Q8CI96 Ptgis-201ENSMUST00000018113 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Clip4Q8CI96 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 33.8 ms