Protein–RNA interactions for Protein: Q8CDG3

Vcpip1, Deubiquitinating protein VCIP135, mousemouse

Predictions only

Length 1,220 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vcpip1Q8CDG3 Lrp8-201ENSMUST00000030356 4555 ntAPPRIS P5 TSL 5 BASIC17.84■□□□□ 0.45
Vcpip1Q8CDG3 Hace1-201ENSMUST00000037044 3785 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Vcpip1Q8CDG3 Hnrnpl-202ENSMUST00000172529 1898 ntTSL 5 BASIC17.84■□□□□ 0.45
Vcpip1Q8CDG3 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Vcpip1Q8CDG3 Rabl6-201ENSMUST00000058137 3230 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Vcpip1Q8CDG3 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC17.84■□□□□ 0.45
Vcpip1Q8CDG3 Csnk1e-201ENSMUST00000117786 2694 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Vcpip1Q8CDG3 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Vcpip1Q8CDG3 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Vcpip1Q8CDG3 Lmbrd1-202ENSMUST00000186096 688 ntTSL 2 BASIC17.84■□□□□ 0.45
Vcpip1Q8CDG3 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC17.84■□□□□ 0.45
Vcpip1Q8CDG3 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Vcpip1Q8CDG3 Gm3375-201ENSMUST00000203929 796 ntBASIC17.84■□□□□ 0.45
Vcpip1Q8CDG3 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Vcpip1Q8CDG3 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC17.84■□□□□ 0.45
Vcpip1Q8CDG3 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Vcpip1Q8CDG3 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Vcpip1Q8CDG3 Ubap1-202ENSMUST00000108060 2514 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Vcpip1Q8CDG3 Prss53-201ENSMUST00000121394 2134 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Vcpip1Q8CDG3 Pde8b-208ENSMUST00000162292 4235 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Vcpip1Q8CDG3 Nfe2-208ENSMUST00000149111 1878 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Vcpip1Q8CDG3 Tbx18-201ENSMUST00000034991 4679 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Vcpip1Q8CDG3 Atxn7l3-201ENSMUST00000073234 3688 ntAPPRIS ALT1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Vcpip1Q8CDG3 Dtx2-202ENSMUST00000111142 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Vcpip1Q8CDG3 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Vcpip1Q8CDG3 Cgn-204ENSMUST00000155485 2361 ntTSL 2 BASIC17.83■□□□□ 0.45
Vcpip1Q8CDG3 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC17.83■□□□□ 0.44
Vcpip1Q8CDG3 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Vcpip1Q8CDG3 Tmem205-201ENSMUST00000046831 785 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Vcpip1Q8CDG3 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Vcpip1Q8CDG3 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC17.83■□□□□ 0.44
Vcpip1Q8CDG3 Myoz1-201ENSMUST00000090469 1289 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Vcpip1Q8CDG3 Efnb3-201ENSMUST00000004036 3183 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Vcpip1Q8CDG3 Kifc3-212ENSMUST00000213004 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
Vcpip1Q8CDG3 Ttc39b-202ENSMUST00000048274 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
Vcpip1Q8CDG3 Fubp1-205ENSMUST00000196695 2374 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
Vcpip1Q8CDG3 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
Vcpip1Q8CDG3 Ube2j2-201ENSMUST00000024056 3483 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Vcpip1Q8CDG3 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Vcpip1Q8CDG3 Tmem150b-202ENSMUST00000086364 2822 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Vcpip1Q8CDG3 Dcdc2c-206ENSMUST00000221349 2209 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
Vcpip1Q8CDG3 Hif3a-201ENSMUST00000037762 2206 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
Vcpip1Q8CDG3 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Vcpip1Q8CDG3 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
Vcpip1Q8CDG3 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Vcpip1Q8CDG3 Fbxl3-206ENSMUST00000145693 3352 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Vcpip1Q8CDG3 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
Vcpip1Q8CDG3 Trmt2a-203ENSMUST00000115640 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Vcpip1Q8CDG3 Naa35-201ENSMUST00000022038 3793 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Vcpip1Q8CDG3 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Vcpip1Q8CDG3 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Vcpip1Q8CDG3 Dpm1-209ENSMUST00000154111 2293 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Vcpip1Q8CDG3 Cspp1-203ENSMUST00000118263 2162 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Vcpip1Q8CDG3 Fbrsl1-202ENSMUST00000069483 4720 ntAPPRIS P2 TSL 5 BASIC17.82■□□□□ 0.44
Vcpip1Q8CDG3 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Vcpip1Q8CDG3 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
Vcpip1Q8CDG3 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC17.82■□□□□ 0.44
Vcpip1Q8CDG3 Gm7791-201ENSMUST00000219066 539 ntBASIC17.82■□□□□ 0.44
Vcpip1Q8CDG3 Gm26709-202ENSMUST00000223049 819 ntTSL 5 BASIC17.82■□□□□ 0.44
Vcpip1Q8CDG3 Otx2os1-204ENSMUST00000227221 751 ntBASIC17.82■□□□□ 0.44
Vcpip1Q8CDG3 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Vcpip1Q8CDG3 Sctr-201ENSMUST00000072886 2012 ntAPPRIS P3 TSL 2 BASIC17.82■□□□□ 0.44
Vcpip1Q8CDG3 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Vcpip1Q8CDG3 Rps6kb2-201ENSMUST00000025749 1864 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Vcpip1Q8CDG3 Nubpl-201ENSMUST00000040090 2987 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Vcpip1Q8CDG3 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Vcpip1Q8CDG3 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Vcpip1Q8CDG3 Fam83f-201ENSMUST00000023044 2988 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Vcpip1Q8CDG3 Nepro-201ENSMUST00000048788 2866 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Vcpip1Q8CDG3 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC17.81■□□□□ 0.44
Vcpip1Q8CDG3 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC17.81■□□□□ 0.44
Vcpip1Q8CDG3 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Vcpip1Q8CDG3 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Vcpip1Q8CDG3 Axin1-202ENSMUST00000118904 2833 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Vcpip1Q8CDG3 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC17.81■□□□□ 0.44
Vcpip1Q8CDG3 Tnfaip2-202ENSMUST00000109792 3284 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Vcpip1Q8CDG3 Dnajb5-201ENSMUST00000037872 3291 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
Vcpip1Q8CDG3 Dhcr24-201ENSMUST00000047973 4028 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Vcpip1Q8CDG3 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Vcpip1Q8CDG3 Sh3bp2-203ENSMUST00000118545 3034 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Vcpip1Q8CDG3 Dars-201ENSMUST00000027602 2175 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Vcpip1Q8CDG3 Gm45203-201ENSMUST00000206384 1831 ntBASIC17.8■□□□□ 0.44
Vcpip1Q8CDG3 Gnb3-201ENSMUST00000024206 1846 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Vcpip1Q8CDG3 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Vcpip1Q8CDG3 Gm20472-201ENSMUST00000174403 1240 ntBASIC17.8■□□□□ 0.44
Vcpip1Q8CDG3 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Vcpip1Q8CDG3 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Vcpip1Q8CDG3 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Vcpip1Q8CDG3 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
Vcpip1Q8CDG3 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Vcpip1Q8CDG3 Gm8189-202ENSMUST00000211035 2039 ntTSL 5 BASIC17.8■□□□□ 0.44
Vcpip1Q8CDG3 Pde8b-201ENSMUST00000022192 2517 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
Vcpip1Q8CDG3 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC17.8■□□□□ 0.44
Vcpip1Q8CDG3 Zfp512b-201ENSMUST00000108789 5714 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Vcpip1Q8CDG3 Agfg1-208ENSMUST00000190052 2991 ntTSL 5 BASIC17.8■□□□□ 0.44
Vcpip1Q8CDG3 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Vcpip1Q8CDG3 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Vcpip1Q8CDG3 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Vcpip1Q8CDG3 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Vcpip1Q8CDG3 Phax-201ENSMUST00000008445 1942 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 37.6 ms