Protein–RNA interactions for Protein: Q8CCF0

Prpf31, U4/U6 small nuclear ribonucleoprotein Prp31, mousemouse

Known RBP Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf31Q8CCF0 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Prpf31Q8CCF0 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Prpf31Q8CCF0 Gm16181-201ENSMUST00000118793 567 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Prpf31Q8CCF0 Mir3081-201ENSMUST00000175305 84 ntBASIC18.14■□□□□ 0.49
Prpf31Q8CCF0 Lce1k-201ENSMUST00000179917 663 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
Prpf31Q8CCF0 Gm28033-201ENSMUST00000184224 96 ntBASIC18.14■□□□□ 0.49
Prpf31Q8CCF0 Celrr-203ENSMUST00000185678 937 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Prpf31Q8CCF0 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Prpf31Q8CCF0 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Prpf31Q8CCF0 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
Prpf31Q8CCF0 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC18.14■□□□□ 0.49
Prpf31Q8CCF0 Atp8b1-201ENSMUST00000025482 6440 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Prpf31Q8CCF0 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
Prpf31Q8CCF0 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Prpf31Q8CCF0 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
Prpf31Q8CCF0 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Prpf31Q8CCF0 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC18.13■□□□□ 0.49
Prpf31Q8CCF0 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Prpf31Q8CCF0 Ocel1-201ENSMUST00000002469 1611 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Prpf31Q8CCF0 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Prpf31Q8CCF0 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Prpf31Q8CCF0 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Prpf31Q8CCF0 Wbp2-202ENSMUST00000106444 1012 ntTSL 2 BASIC18.13■□□□□ 0.49
Prpf31Q8CCF0 Rbm4-203ENSMUST00000178615 1018 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Prpf31Q8CCF0 Jagn1-202ENSMUST00000204254 1147 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Prpf31Q8CCF0 Etfb-201ENSMUST00000004729 893 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Prpf31Q8CCF0 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Prpf31Q8CCF0 Hspb6-201ENSMUST00000044048 1363 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Prpf31Q8CCF0 Dtx3-202ENSMUST00000116229 1994 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Prpf31Q8CCF0 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Prpf31Q8CCF0 Rai1-201ENSMUST00000064190 7348 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Prpf31Q8CCF0 St8sia1-201ENSMUST00000032421 8991 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Prpf31Q8CCF0 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC18.12■□□□□ 0.49
Prpf31Q8CCF0 Dok5-201ENSMUST00000029075 1768 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Prpf31Q8CCF0 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Prpf31Q8CCF0 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Prpf31Q8CCF0 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
Prpf31Q8CCF0 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
Prpf31Q8CCF0 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
Prpf31Q8CCF0 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Prpf31Q8CCF0 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Prpf31Q8CCF0 Cd82-204ENSMUST00000111257 1003 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
Prpf31Q8CCF0 Naa10-204ENSMUST00000114389 1031 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Prpf31Q8CCF0 Pqlc1-208ENSMUST00000144468 1050 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Prpf31Q8CCF0 Psme2-208ENSMUST00000161807 962 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Prpf31Q8CCF0 Gm27357-201ENSMUST00000183754 135 ntBASIC18.12■□□□□ 0.49
Prpf31Q8CCF0 Gm18669-201ENSMUST00000216049 778 ntBASIC18.12■□□□□ 0.49
Prpf31Q8CCF0 Cebpzos-201ENSMUST00000063817 753 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
Prpf31Q8CCF0 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Prpf31Q8CCF0 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Prpf31Q8CCF0 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Prpf31Q8CCF0 Rsph6a-202ENSMUST00000076887 1580 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Prpf31Q8CCF0 Kbtbd11-201ENSMUST00000069399 6973 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Prpf31Q8CCF0 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
Prpf31Q8CCF0 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Prpf31Q8CCF0 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Prpf31Q8CCF0 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Prpf31Q8CCF0 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
Prpf31Q8CCF0 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Prpf31Q8CCF0 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Prpf31Q8CCF0 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC18.11■□□□□ 0.49
Prpf31Q8CCF0 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Prpf31Q8CCF0 Sh3glb1-205ENSMUST00000199854 1416 ntTSL 5 BASIC18.11■□□□□ 0.49
Prpf31Q8CCF0 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC18.11■□□□□ 0.49
Prpf31Q8CCF0 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC18.11■□□□□ 0.49
Prpf31Q8CCF0 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC18.11■□□□□ 0.49
Prpf31Q8CCF0 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Prpf31Q8CCF0 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
Prpf31Q8CCF0 Gm43338-201ENSMUST00000198617 2223 ntBASIC18.11■□□□□ 0.49
Prpf31Q8CCF0 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
Prpf31Q8CCF0 Galnt13-204ENSMUST00000112636 7530 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Prpf31Q8CCF0 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Prpf31Q8CCF0 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Prpf31Q8CCF0 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Prpf31Q8CCF0 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Prpf31Q8CCF0 Slc30a10-201ENSMUST00000061093 5836 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Prpf31Q8CCF0 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
Prpf31Q8CCF0 Tnks-201ENSMUST00000033929 9163 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Prpf31Q8CCF0 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Prpf31Q8CCF0 Fhl3-201ENSMUST00000038684 1664 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Prpf31Q8CCF0 Pla2g2c-201ENSMUST00000030530 1618 ntAPPRIS P1 TSL 3 BASIC18.1■□□□□ 0.49
Prpf31Q8CCF0 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Prpf31Q8CCF0 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Prpf31Q8CCF0 2810468N07Rik-201ENSMUST00000163493 1349 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Prpf31Q8CCF0 1500009L16Rik-201ENSMUST00000150459 1194 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Prpf31Q8CCF0 Gm19345-201ENSMUST00000172815 993 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Prpf31Q8CCF0 Gm35154-202ENSMUST00000217008 1093 ntTSL 5 BASIC18.1■□□□□ 0.49
Prpf31Q8CCF0 AC159205.3-201ENSMUST00000224614 874 ntBASIC18.1■□□□□ 0.49
Prpf31Q8CCF0 Adcy5-201ENSMUST00000114913 7007 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Prpf31Q8CCF0 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
Prpf31Q8CCF0 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Prpf31Q8CCF0 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Prpf31Q8CCF0 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Prpf31Q8CCF0 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Prpf31Q8CCF0 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Prpf31Q8CCF0 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Prpf31Q8CCF0 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Prpf31Q8CCF0 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
Prpf31Q8CCF0 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Prpf31Q8CCF0 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 27.3 ms