Protein–RNA interactions for Protein: Q8C7W7

Dclre1b, 5' exonuclease Apollo, mousemouse

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Dclre1bQ8C7W7 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Dclre1bQ8C7W7 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Dclre1bQ8C7W7 Zkscan3-204ENSMUST00000117721 5788 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Dclre1bQ8C7W7 Dpagt1-201ENSMUST00000054708 2205 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Dclre1bQ8C7W7 Senp7-211ENSMUST00000202000 3218 ntTSL 2 BASIC16.85■□□□□ 0.29
Dclre1bQ8C7W7 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Dclre1bQ8C7W7 Gabrb3-201ENSMUST00000039697 5579 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Dclre1bQ8C7W7 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Dclre1bQ8C7W7 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Dclre1bQ8C7W7 Pqlc1-202ENSMUST00000091798 1989 ntAPPRIS P3 TSL 5 BASIC16.84■□□□□ 0.29
Dclre1bQ8C7W7 Rhcg-201ENSMUST00000032766 2090 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Dclre1bQ8C7W7 Dcaf17-203ENSMUST00000112159 2490 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Dclre1bQ8C7W7 Xrcc1-205ENSMUST00000205573 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Dclre1bQ8C7W7 Rgl3-201ENSMUST00000045726 2543 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Dclre1bQ8C7W7 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC16.84■□□□□ 0.29
Dclre1bQ8C7W7 Gm9484-201ENSMUST00000195892 1159 ntBASIC16.84■□□□□ 0.29
Dclre1bQ8C7W7 Gm2559-201ENSMUST00000201323 363 ntBASIC16.84■□□□□ 0.29
Dclre1bQ8C7W7 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Dclre1bQ8C7W7 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC16.84■□□□□ 0.29
Dclre1bQ8C7W7 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Dclre1bQ8C7W7 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Dclre1bQ8C7W7 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Dclre1bQ8C7W7 Samd4-204ENSMUST00000125688 1773 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Dclre1bQ8C7W7 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Dclre1bQ8C7W7 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Dclre1bQ8C7W7 Hist1h2ac-201ENSMUST00000171127 2482 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
Dclre1bQ8C7W7 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC16.83■□□□□ 0.29
Dclre1bQ8C7W7 Tcf3-207ENSMUST00000105343 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.29
Dclre1bQ8C7W7 Nkpd1-202ENSMUST00000207576 2916 ntAPPRIS P2 TSL 5 BASIC16.83■□□□□ 0.29
Dclre1bQ8C7W7 Papolb-201ENSMUST00000099400 4239 ntAPPRIS P1 BASIC16.83■□□□□ 0.29
Dclre1bQ8C7W7 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
Dclre1bQ8C7W7 Rcc1-203ENSMUST00000105951 2326 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
Dclre1bQ8C7W7 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Dclre1bQ8C7W7 Gm13401-201ENSMUST00000117074 291 ntBASIC16.83■□□□□ 0.28
Dclre1bQ8C7W7 Gm13509-201ENSMUST00000119733 1308 ntBASIC16.83■□□□□ 0.28
Dclre1bQ8C7W7 Mapk8ip3-208ENSMUST00000121787 5431 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Dclre1bQ8C7W7 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Dclre1bQ8C7W7 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Dclre1bQ8C7W7 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Dclre1bQ8C7W7 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Dclre1bQ8C7W7 AC153881.1-201ENSMUST00000214448 284 ntBASIC16.83■□□□□ 0.28
Dclre1bQ8C7W7 Vmn1r17-204ENSMUST00000228294 2084 ntAPPRIS ALT2 BASIC16.83■□□□□ 0.28
Dclre1bQ8C7W7 Tap1-201ENSMUST00000041633 2614 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Dclre1bQ8C7W7 Ptpa-201ENSMUST00000042055 2586 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Dclre1bQ8C7W7 Tdg-ps-201ENSMUST00000051363 2968 ntBASIC16.83■□□□□ 0.28
Dclre1bQ8C7W7 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Dclre1bQ8C7W7 1190002N15Rik-201ENSMUST00000113028 3950 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Dclre1bQ8C7W7 Hsd17b4-201ENSMUST00000025385 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Dclre1bQ8C7W7 Apeh-206ENSMUST00000193254 2518 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Dclre1bQ8C7W7 AC093043.3-201ENSMUST00000226531 2273 ntBASIC16.82■□□□□ 0.28
Dclre1bQ8C7W7 Cyp46a1-201ENSMUST00000021684 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Dclre1bQ8C7W7 Akp-ps1-202ENSMUST00000212812 1959 ntTSL 5 BASIC16.82■□□□□ 0.28
Dclre1bQ8C7W7 Fbxl21-201ENSMUST00000045428 1965 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Dclre1bQ8C7W7 Gnas-202ENSMUST00000087871 3903 ntAPPRIS P4 TSL 1 (best) BASIC16.82■□□□□ 0.28
Dclre1bQ8C7W7 Zkscan3-208ENSMUST00000224820 5398 ntBASIC16.82■□□□□ 0.28
Dclre1bQ8C7W7 Ankrd50-202ENSMUST00000120875 4945 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Dclre1bQ8C7W7 Slc6a17-208ENSMUST00000169449 6322 ntAPPRIS ALT1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Dclre1bQ8C7W7 Slc6a17-201ENSMUST00000029499 6308 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
Dclre1bQ8C7W7 Adgra3-201ENSMUST00000030971 4480 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Dclre1bQ8C7W7 Slc32a1-201ENSMUST00000045738 2797 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Dclre1bQ8C7W7 Tmem117-201ENSMUST00000080141 2781 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Dclre1bQ8C7W7 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Dclre1bQ8C7W7 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Dclre1bQ8C7W7 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC16.82■□□□□ 0.28
Dclre1bQ8C7W7 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
Dclre1bQ8C7W7 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC16.82■□□□□ 0.28
Dclre1bQ8C7W7 AC153881.2-201ENSMUST00000214877 204 ntBASIC16.82■□□□□ 0.28
Dclre1bQ8C7W7 AC107711.5-202ENSMUST00000226429 702 ntBASIC16.82■□□□□ 0.28
Dclre1bQ8C7W7 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Dclre1bQ8C7W7 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Dclre1bQ8C7W7 Paox-202ENSMUST00000097967 1024 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Dclre1bQ8C7W7 Eda-205ENSMUST00000113778 4942 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Dclre1bQ8C7W7 Eda-207ENSMUST00000113780 4915 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Dclre1bQ8C7W7 Eda-208ENSMUST00000113781 4915 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Dclre1bQ8C7W7 Eda-209ENSMUST00000113783 4930 ntTSL 5 BASIC16.82■□□□□ 0.28
Dclre1bQ8C7W7 Mrs2-201ENSMUST00000021772 7035 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
Dclre1bQ8C7W7 Eif2ak3-201ENSMUST00000034093 4513 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Dclre1bQ8C7W7 Mgat1-201ENSMUST00000081794 2976 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Dclre1bQ8C7W7 Htatsf1-201ENSMUST00000088652 2810 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Dclre1bQ8C7W7 Rabep1-201ENSMUST00000076270 5408 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Dclre1bQ8C7W7 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Dclre1bQ8C7W7 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Dclre1bQ8C7W7 Asic4-201ENSMUST00000037708 2464 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Dclre1bQ8C7W7 Gm19684-201ENSMUST00000173128 1611 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Dclre1bQ8C7W7 Zmynd19-201ENSMUST00000028350 3903 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Dclre1bQ8C7W7 Zfp384-207ENSMUST00000112427 3072 ntAPPRIS P2 TSL 5 BASIC16.81■□□□□ 0.28
Dclre1bQ8C7W7 Agpat1-201ENSMUST00000037489 2190 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Dclre1bQ8C7W7 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC16.81■□□□□ 0.28
Dclre1bQ8C7W7 Pprc1-203ENSMUST00000111899 5246 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Dclre1bQ8C7W7 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
Dclre1bQ8C7W7 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC16.81■□□□□ 0.28
Dclre1bQ8C7W7 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC16.81■□□□□ 0.28
Dclre1bQ8C7W7 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
Dclre1bQ8C7W7 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC16.81■□□□□ 0.28
Dclre1bQ8C7W7 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC16.81■□□□□ 0.28
Dclre1bQ8C7W7 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Dclre1bQ8C7W7 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Dclre1bQ8C7W7 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC16.81■□□□□ 0.28
Dclre1bQ8C7W7 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Dclre1bQ8C7W7 Rbfox2-204ENSMUST00000171751 3558 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 27.7 ms