Protein–RNA interactions for Protein: Q8C4J0

Ccdc60, Coiled-coil domain-containing protein 60, mousemouse

Predictions only

Length 545 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc60Q8C4J0 Hand1-203ENSMUST00000160392 1806 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Ccdc60Q8C4J0 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC21.16■□□□□ 0.98
Ccdc60Q8C4J0 Fhl2-201ENSMUST00000008280 1563 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Ccdc60Q8C4J0 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
Ccdc60Q8C4J0 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Ccdc60Q8C4J0 Dusp14-205ENSMUST00000164891 1454 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Ccdc60Q8C4J0 Cryl1-201ENSMUST00000022517 1497 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Ccdc60Q8C4J0 Gm9013-201ENSMUST00000132939 882 ntBASIC21.16■□□□□ 0.98
Ccdc60Q8C4J0 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC21.16■□□□□ 0.98
Ccdc60Q8C4J0 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC21.16■□□□□ 0.98
Ccdc60Q8C4J0 Gm7977-201ENSMUST00000193787 748 ntBASIC21.16■□□□□ 0.98
Ccdc60Q8C4J0 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Ccdc60Q8C4J0 Gm5587-201ENSMUST00000206270 674 ntBASIC21.16■□□□□ 0.98
Ccdc60Q8C4J0 Nudt21-204ENSMUST00000212981 1184 ntTSL 3 BASIC21.16■□□□□ 0.98
Ccdc60Q8C4J0 Mrpl14-201ENSMUST00000024734 645 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Ccdc60Q8C4J0 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC21.16■□□□□ 0.98
Ccdc60Q8C4J0 Slc25a23-201ENSMUST00000040280 3362 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Ccdc60Q8C4J0 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Ccdc60Q8C4J0 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Ccdc60Q8C4J0 Cul1-201ENSMUST00000031697 3161 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Ccdc60Q8C4J0 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Ccdc60Q8C4J0 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Ccdc60Q8C4J0 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
Ccdc60Q8C4J0 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC21.15■□□□□ 0.98
Ccdc60Q8C4J0 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC21.15■□□□□ 0.98
Ccdc60Q8C4J0 AA414768-201ENSMUST00000121924 1257 ntBASIC21.15■□□□□ 0.98
Ccdc60Q8C4J0 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC21.15■□□□□ 0.98
Ccdc60Q8C4J0 Gm19935-201ENSMUST00000209208 979 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Ccdc60Q8C4J0 AC156576.2-201ENSMUST00000222752 503 ntTSL 5 BASIC21.15■□□□□ 0.98
Ccdc60Q8C4J0 Rplp2-201ENSMUST00000084434 964 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Ccdc60Q8C4J0 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Ccdc60Q8C4J0 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Ccdc60Q8C4J0 Asph-210ENSMUST00000108337 2836 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Ccdc60Q8C4J0 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Ccdc60Q8C4J0 Gna12-201ENSMUST00000000153 3416 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Ccdc60Q8C4J0 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Ccdc60Q8C4J0 Slc25a20-201ENSMUST00000035222 1783 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Ccdc60Q8C4J0 Mybl2-201ENSMUST00000018005 3651 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Ccdc60Q8C4J0 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Ccdc60Q8C4J0 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC21.14■□□□□ 0.98
Ccdc60Q8C4J0 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Ccdc60Q8C4J0 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
Ccdc60Q8C4J0 Kcnq2-201ENSMUST00000016491 3067 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
Ccdc60Q8C4J0 Txndc11-201ENSMUST00000038424 3095 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Ccdc60Q8C4J0 Sclt1-201ENSMUST00000026866 3005 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.98
Ccdc60Q8C4J0 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Ccdc60Q8C4J0 Dag1-201ENSMUST00000080435 4364 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Ccdc60Q8C4J0 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Ccdc60Q8C4J0 Mir770-201ENSMUST00000103252 94 ntBASIC21.14■□□□□ 0.97
Ccdc60Q8C4J0 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC21.14■□□□□ 0.97
Ccdc60Q8C4J0 Pyy-201ENSMUST00000017455 555 ntAPPRIS P3 TSL 1 (best) BASIC21.14■□□□□ 0.97
Ccdc60Q8C4J0 Gm6345-202ENSMUST00000180900 204 ntBASIC21.14■□□□□ 0.97
Ccdc60Q8C4J0 Gm29707-201ENSMUST00000196325 491 ntBASIC21.14■□□□□ 0.97
Ccdc60Q8C4J0 Eif1b-201ENSMUST00000007139 1035 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Ccdc60Q8C4J0 Mfsd4b3-201ENSMUST00000095749 1787 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Ccdc60Q8C4J0 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Ccdc60Q8C4J0 Gm45244-201ENSMUST00000211328 2200 ntBASIC21.14■□□□□ 0.97
Ccdc60Q8C4J0 Tyk2-205ENSMUST00000214864 1662 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Ccdc60Q8C4J0 Gm20517-202ENSMUST00000132397 4807 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Ccdc60Q8C4J0 Pcmt1-202ENSMUST00000159917 2491 ntAPPRIS P3 TSL 1 (best) BASIC21.14■□□□□ 0.97
Ccdc60Q8C4J0 Tatdn2-202ENSMUST00000113022 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
Ccdc60Q8C4J0 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Ccdc60Q8C4J0 Csnk1e-201ENSMUST00000117786 2694 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Ccdc60Q8C4J0 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Ccdc60Q8C4J0 Stxbp3-205ENSMUST00000138552 1789 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Ccdc60Q8C4J0 Enpp1-202ENSMUST00000105520 6777 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
Ccdc60Q8C4J0 Psip1-201ENSMUST00000030207 3251 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Ccdc60Q8C4J0 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Ccdc60Q8C4J0 Atg5-201ENSMUST00000039286 2352 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Ccdc60Q8C4J0 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Ccdc60Q8C4J0 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC21.13■□□□□ 0.97
Ccdc60Q8C4J0 Tppp3-202ENSMUST00000176419 719 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Ccdc60Q8C4J0 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC21.13■□□□□ 0.97
Ccdc60Q8C4J0 Il17a-201ENSMUST00000027061 1171 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Ccdc60Q8C4J0 Lrrc14-202ENSMUST00000127208 4849 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Ccdc60Q8C4J0 Sgpp1-201ENSMUST00000021450 3323 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Ccdc60Q8C4J0 Ndufs2-202ENSMUST00000111318 1545 ntTSL 5 BASIC21.13■□□□□ 0.97
Ccdc60Q8C4J0 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
Ccdc60Q8C4J0 Ube2i-207ENSMUST00000172868 2755 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Ccdc60Q8C4J0 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
Ccdc60Q8C4J0 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC21.12■□□□□ 0.97
Ccdc60Q8C4J0 4930474H06Rik-201ENSMUST00000132822 1590 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Ccdc60Q8C4J0 Rsph6a-202ENSMUST00000076887 1580 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Ccdc60Q8C4J0 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC21.12■□□□□ 0.97
Ccdc60Q8C4J0 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC21.12■□□□□ 0.97
Ccdc60Q8C4J0 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC21.12■□□□□ 0.97
Ccdc60Q8C4J0 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Ccdc60Q8C4J0 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC21.12■□□□□ 0.97
Ccdc60Q8C4J0 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Ccdc60Q8C4J0 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Ccdc60Q8C4J0 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC21.12■□□□□ 0.97
Ccdc60Q8C4J0 Akap8l-201ENSMUST00000050214 2075 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Ccdc60Q8C4J0 Saysd1-201ENSMUST00000059666 2315 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Ccdc60Q8C4J0 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Ccdc60Q8C4J0 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Ccdc60Q8C4J0 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Ccdc60Q8C4J0 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC21.12■□□□□ 0.97
Ccdc60Q8C4J0 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Ccdc60Q8C4J0 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
Ccdc60Q8C4J0 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC21.11■□□□□ 0.97
Retrieved 100 of 76,532 protein–RNA pairs in 77.5 ms