Protein–RNA interactions for Protein: Q8C1Q6

Smim4, Small integral membrane protein 4, mousemouse

Predictions only

Length 80 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smim4Q8C1Q6 Tfdp2-201ENSMUST00000034982 7354 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
Smim4Q8C1Q6 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Smim4Q8C1Q6 Tbx3-202ENSMUST00000079719 4982 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Smim4Q8C1Q6 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Smim4Q8C1Q6 Gm18336-201ENSMUST00000180787 2298 ntAPPRIS P1 BASIC13.91□□□□□ -0.18
Smim4Q8C1Q6 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Smim4Q8C1Q6 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Smim4Q8C1Q6 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
Smim4Q8C1Q6 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC13.91□□□□□ -0.18
Smim4Q8C1Q6 Tmem205-201ENSMUST00000046831 785 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Smim4Q8C1Q6 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Smim4Q8C1Q6 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC13.91□□□□□ -0.18
Smim4Q8C1Q6 Lrrc45-201ENSMUST00000026139 2492 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Smim4Q8C1Q6 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Smim4Q8C1Q6 Plekha4-202ENSMUST00000209517 2577 ntAPPRIS P2 TSL 5 BASIC13.91□□□□□ -0.18
Smim4Q8C1Q6 Hip1r-201ENSMUST00000000939 6735 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Smim4Q8C1Q6 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Smim4Q8C1Q6 Anks1-201ENSMUST00000025058 6844 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Smim4Q8C1Q6 Nefh-201ENSMUST00000093369 3994 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
Smim4Q8C1Q6 Fhl2-201ENSMUST00000008280 1563 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Smim4Q8C1Q6 Saysd1-201ENSMUST00000059666 2315 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Smim4Q8C1Q6 Arhgef2-202ENSMUST00000107510 4390 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Smim4Q8C1Q6 Fignl2-202ENSMUST00000213610 4462 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
Smim4Q8C1Q6 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Smim4Q8C1Q6 H2-Q10-202ENSMUST00000174525 1991 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
Smim4Q8C1Q6 C77080-201ENSMUST00000052602 5187 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
Smim4Q8C1Q6 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
Smim4Q8C1Q6 Tmx4-201ENSMUST00000038228 5488 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Smim4Q8C1Q6 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
Smim4Q8C1Q6 Slc16a3-202ENSMUST00000100130 2386 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Smim4Q8C1Q6 Snx27-202ENSMUST00000107283 3531 ntAPPRIS P4 TSL 1 (best) BASIC13.9□□□□□ -0.18
Smim4Q8C1Q6 Dok4-201ENSMUST00000046461 2590 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Smim4Q8C1Q6 Zfp334-201ENSMUST00000103084 8205 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Smim4Q8C1Q6 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Smim4Q8C1Q6 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Smim4Q8C1Q6 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Smim4Q8C1Q6 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Smim4Q8C1Q6 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
Smim4Q8C1Q6 Impdh1-202ENSMUST00000159124 2600 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Smim4Q8C1Q6 Csk-201ENSMUST00000034863 2749 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Smim4Q8C1Q6 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Smim4Q8C1Q6 Nid1-201ENSMUST00000005532 6091 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Smim4Q8C1Q6 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
Smim4Q8C1Q6 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC13.9□□□□□ -0.18
Smim4Q8C1Q6 Timm23-208ENSMUST00000226683 750 ntBASIC13.9□□□□□ -0.18
Smim4Q8C1Q6 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Smim4Q8C1Q6 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
Smim4Q8C1Q6 Elavl3-201ENSMUST00000003501 5014 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Smim4Q8C1Q6 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.18
Smim4Q8C1Q6 Nox4-202ENSMUST00000068829 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Smim4Q8C1Q6 Mis18bp1-208ENSMUST00000222244 2053 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Smim4Q8C1Q6 Tlnrd1-201ENSMUST00000094216 4433 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
Smim4Q8C1Q6 Nfe2l3-201ENSMUST00000005103 2544 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Smim4Q8C1Q6 Ubash3b-201ENSMUST00000044155 6354 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Smim4Q8C1Q6 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Smim4Q8C1Q6 Ptprt-202ENSMUST00000109442 7719 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.19
Smim4Q8C1Q6 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC13.9□□□□□ -0.19
Smim4Q8C1Q6 Gpr137b-201ENSMUST00000021738 2971 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Smim4Q8C1Q6 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Smim4Q8C1Q6 Mycs-201ENSMUST00000058404 2368 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
Smim4Q8C1Q6 Msl2-201ENSMUST00000085177 4889 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Smim4Q8C1Q6 Cdh11-201ENSMUST00000075190 5647 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Smim4Q8C1Q6 Ace-201ENSMUST00000001963 4906 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Smim4Q8C1Q6 Hace1-201ENSMUST00000037044 3785 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Smim4Q8C1Q6 Snx18-201ENSMUST00000109241 4447 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Smim4Q8C1Q6 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
Smim4Q8C1Q6 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Smim4Q8C1Q6 Mir1199-201ENSMUST00000117015 119 ntBASIC13.89□□□□□ -0.19
Smim4Q8C1Q6 Simc1-201ENSMUST00000118072 2116 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
Smim4Q8C1Q6 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Smim4Q8C1Q6 CT025689.6-201ENSMUST00000224991 1104 ntBASIC13.89□□□□□ -0.19
Smim4Q8C1Q6 AC175538.1-201ENSMUST00000225343 1269 ntBASIC13.89□□□□□ -0.19
Smim4Q8C1Q6 E230025N22Rik-201ENSMUST00000115682 2016 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Smim4Q8C1Q6 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Smim4Q8C1Q6 Lpgat1-201ENSMUST00000110855 7233 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Smim4Q8C1Q6 Igdcc4-202ENSMUST00000077696 6361 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
Smim4Q8C1Q6 Pigz-201ENSMUST00000052174 2184 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Smim4Q8C1Q6 Dgkz-202ENSMUST00000099709 3512 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
Smim4Q8C1Q6 Gm10435-202ENSMUST00000162526 2878 ntTSL 5 BASIC13.89□□□□□ -0.19
Smim4Q8C1Q6 Krt83-201ENSMUST00000023718 1756 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Smim4Q8C1Q6 Fhl1-203ENSMUST00000114769 2770 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Smim4Q8C1Q6 Fancg-201ENSMUST00000030165 2771 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Smim4Q8C1Q6 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC13.88□□□□□ -0.19
Smim4Q8C1Q6 Slc44a1-201ENSMUST00000102911 3102 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Smim4Q8C1Q6 Cblb-201ENSMUST00000114471 6648 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Smim4Q8C1Q6 Tmem87b-201ENSMUST00000110325 4807 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Smim4Q8C1Q6 Enah-202ENSMUST00000111024 3572 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
Smim4Q8C1Q6 Poglut1-201ENSMUST00000036210 2758 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Smim4Q8C1Q6 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Smim4Q8C1Q6 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Smim4Q8C1Q6 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
Smim4Q8C1Q6 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC13.88□□□□□ -0.19
Smim4Q8C1Q6 AC154649.1-201ENSMUST00000227392 384 ntBASIC13.88□□□□□ -0.19
Smim4Q8C1Q6 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Smim4Q8C1Q6 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
Smim4Q8C1Q6 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC13.88□□□□□ -0.19
Smim4Q8C1Q6 Tle3-218ENSMUST00000178113 5205 ntTSL 5 BASIC13.88□□□□□ -0.19
Smim4Q8C1Q6 Fbxl12os-202ENSMUST00000136376 2349 ntTSL 2 BASIC13.88□□□□□ -0.19
Smim4Q8C1Q6 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Smim4Q8C1Q6 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 25.3 ms