Protein–RNA interactions for Protein: Q8BXL9

Iffo1, Intermediate filament family orphan 1, mousemouse

Predictions only

Length 562 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Iffo1Q8BXL9 Agpat1-201ENSMUST00000037489 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Iffo1Q8BXL9 Usp31-201ENSMUST00000046929 10198 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
Iffo1Q8BXL9 Hdac2-202ENSMUST00000105510 3250 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Iffo1Q8BXL9 Papd4-205ENSMUST00000225868 3081 ntAPPRIS ALT1 BASIC17.15■□□□□ 0.34
Iffo1Q8BXL9 Ddx50-201ENSMUST00000020270 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Iffo1Q8BXL9 Fam184a-201ENSMUST00000020003 4164 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
Iffo1Q8BXL9 Chd4-201ENSMUST00000056889 6697 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Iffo1Q8BXL9 Pcdha7-201ENSMUST00000192631 5337 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Iffo1Q8BXL9 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC17.14■□□□□ 0.33
Iffo1Q8BXL9 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Iffo1Q8BXL9 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC17.14■□□□□ 0.33
Iffo1Q8BXL9 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
Iffo1Q8BXL9 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Iffo1Q8BXL9 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC17.14■□□□□ 0.33
Iffo1Q8BXL9 Gm2011-201ENSMUST00000203124 1263 ntBASIC17.14■□□□□ 0.33
Iffo1Q8BXL9 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC17.14■□□□□ 0.33
Iffo1Q8BXL9 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Iffo1Q8BXL9 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Iffo1Q8BXL9 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Iffo1Q8BXL9 Pnpo-201ENSMUST00000018803 1994 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Iffo1Q8BXL9 Prpf3-207ENSMUST00000161476 2732 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Iffo1Q8BXL9 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Iffo1Q8BXL9 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
Iffo1Q8BXL9 Arap3-201ENSMUST00000042944 5224 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Iffo1Q8BXL9 Itpkc-201ENSMUST00000003850 3247 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Iffo1Q8BXL9 Ttc13-203ENSMUST00000118134 3277 ntTSL 5 BASIC17.13■□□□□ 0.33
Iffo1Q8BXL9 Tnip2-202ENSMUST00000087737 1987 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Iffo1Q8BXL9 Gm26578-201ENSMUST00000181702 4611 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Iffo1Q8BXL9 Kif17-204ENSMUST00000105821 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Iffo1Q8BXL9 Golim4-201ENSMUST00000038563 5546 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
Iffo1Q8BXL9 Slc35a1-201ENSMUST00000029970 2039 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Iffo1Q8BXL9 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
Iffo1Q8BXL9 Jph4-201ENSMUST00000022819 4489 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Iffo1Q8BXL9 Rffl-206ENSMUST00000108173 3489 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Iffo1Q8BXL9 Osbpl1a-206ENSMUST00000121774 2931 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Iffo1Q8BXL9 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Iffo1Q8BXL9 Rabl6-201ENSMUST00000058137 3230 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Iffo1Q8BXL9 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC17.13■□□□□ 0.33
Iffo1Q8BXL9 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
Iffo1Q8BXL9 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC17.13■□□□□ 0.33
Iffo1Q8BXL9 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Iffo1Q8BXL9 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
Iffo1Q8BXL9 Hhatl-201ENSMUST00000035110 1870 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Iffo1Q8BXL9 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Iffo1Q8BXL9 Dcaf17-203ENSMUST00000112159 2490 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Iffo1Q8BXL9 Sec24a-204ENSMUST00000109097 6581 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
Iffo1Q8BXL9 Ckap4-201ENSMUST00000053871 3089 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Iffo1Q8BXL9 Tcf3-204ENSMUST00000105340 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Iffo1Q8BXL9 Tcf3-202ENSMUST00000020379 2829 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Iffo1Q8BXL9 Nr3c2-204ENSMUST00000109913 5916 ntAPPRIS P2 TSL 5 BASIC17.13■□□□□ 0.33
Iffo1Q8BXL9 Kif21a-201ENSMUST00000067205 6307 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Iffo1Q8BXL9 Sclt1-201ENSMUST00000026866 3005 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
Iffo1Q8BXL9 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Iffo1Q8BXL9 Xpo6-201ENSMUST00000009344 4455 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
Iffo1Q8BXL9 Rgl3-201ENSMUST00000045726 2543 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Iffo1Q8BXL9 Senp7-211ENSMUST00000202000 3218 ntTSL 2 BASIC17.12■□□□□ 0.33
Iffo1Q8BXL9 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Iffo1Q8BXL9 Kpna4-203ENSMUST00000194558 3726 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Iffo1Q8BXL9 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC17.12■□□□□ 0.33
Iffo1Q8BXL9 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
Iffo1Q8BXL9 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
Iffo1Q8BXL9 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Iffo1Q8BXL9 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Iffo1Q8BXL9 Gm11643-201ENSMUST00000119578 864 ntBASIC17.12■□□□□ 0.33
Iffo1Q8BXL9 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC17.12■□□□□ 0.33
Iffo1Q8BXL9 Gm7291-201ENSMUST00000199147 382 ntBASIC17.12■□□□□ 0.33
Iffo1Q8BXL9 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC17.12■□□□□ 0.33
Iffo1Q8BXL9 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Iffo1Q8BXL9 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Iffo1Q8BXL9 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Iffo1Q8BXL9 Fam102a-201ENSMUST00000048375 4223 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Iffo1Q8BXL9 1700034J05Rik-202ENSMUST00000111622 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Iffo1Q8BXL9 Foxo3-201ENSMUST00000056974 2889 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Iffo1Q8BXL9 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Iffo1Q8BXL9 Otp-201ENSMUST00000022195 2656 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Iffo1Q8BXL9 Pqlc1-202ENSMUST00000091798 1989 ntAPPRIS P3 TSL 5 BASIC17.11■□□□□ 0.33
Iffo1Q8BXL9 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Iffo1Q8BXL9 Sec31a-201ENSMUST00000094578 4228 ntAPPRIS P2 TSL 5 BASIC17.11■□□□□ 0.33
Iffo1Q8BXL9 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Iffo1Q8BXL9 P3h1-203ENSMUST00000102662 2977 ntAPPRIS P3 TSL 5 BASIC17.11■□□□□ 0.33
Iffo1Q8BXL9 Snx8-201ENSMUST00000031539 2627 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Iffo1Q8BXL9 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC17.11■□□□□ 0.33
Iffo1Q8BXL9 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Iffo1Q8BXL9 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Iffo1Q8BXL9 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC17.11■□□□□ 0.33
Iffo1Q8BXL9 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC17.11■□□□□ 0.33
Iffo1Q8BXL9 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC17.11■□□□□ 0.33
Iffo1Q8BXL9 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
Iffo1Q8BXL9 Arhgap11a-204ENSMUST00000110949 4458 ntAPPRIS P2 TSL 5 BASIC17.11■□□□□ 0.33
Iffo1Q8BXL9 Kctd6-202ENSMUST00000170111 3052 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Iffo1Q8BXL9 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Iffo1Q8BXL9 Tmx4-201ENSMUST00000038228 5488 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Iffo1Q8BXL9 Tmem33-204ENSMUST00000161369 6164 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Iffo1Q8BXL9 Tmem119-201ENSMUST00000067853 2242 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Iffo1Q8BXL9 Mydgf-201ENSMUST00000019723 1710 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Iffo1Q8BXL9 Fam83g-202ENSMUST00000093019 4778 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Iffo1Q8BXL9 Prrx1-202ENSMUST00000075805 4986 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Iffo1Q8BXL9 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
Iffo1Q8BXL9 Sema6b-201ENSMUST00000001256 3736 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Iffo1Q8BXL9 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC17.1■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 33.8 ms