Protein–RNA interactions for Protein: Q8BRF7

Scfd1, Sec1 family domain-containing protein 1, mousemouse

Known RBP Predictions only

Length 639 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scfd1Q8BRF7 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
Scfd1Q8BRF7 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Scfd1Q8BRF7 Rbm11-201ENSMUST00000046378 1400 ntAPPRIS P2 TSL 5 BASIC18.93■□□□□ 0.62
Scfd1Q8BRF7 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Scfd1Q8BRF7 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Scfd1Q8BRF7 Speg-202ENSMUST00000113587 1254 ntTSL 5 BASIC18.93■□□□□ 0.62
Scfd1Q8BRF7 Gm15165-201ENSMUST00000118140 502 ntBASIC18.93■□□□□ 0.62
Scfd1Q8BRF7 Gm11729-201ENSMUST00000124901 713 ntTSL 3 BASIC18.93■□□□□ 0.62
Scfd1Q8BRF7 Scpep1os-201ENSMUST00000139592 811 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Scfd1Q8BRF7 AV026068-207ENSMUST00000187718 400 ntTSL 5 BASIC18.93■□□□□ 0.62
Scfd1Q8BRF7 Gm29246-201ENSMUST00000189221 349 ntTSL 3 BASIC18.93■□□□□ 0.62
Scfd1Q8BRF7 Tm4sf5-201ENSMUST00000019063 1000 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Scfd1Q8BRF7 Gm5864-201ENSMUST00000202263 970 ntBASIC18.93■□□□□ 0.62
Scfd1Q8BRF7 Gm45606-201ENSMUST00000209836 2795 ntBASIC18.93■□□□□ 0.62
Scfd1Q8BRF7 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
Scfd1Q8BRF7 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Scfd1Q8BRF7 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Scfd1Q8BRF7 Kptn-201ENSMUST00000006178 1630 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Scfd1Q8BRF7 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
Scfd1Q8BRF7 Perp-201ENSMUST00000019998 1952 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Scfd1Q8BRF7 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Scfd1Q8BRF7 Mettl21a-202ENSMUST00000114079 2030 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Scfd1Q8BRF7 Slc25a20-201ENSMUST00000035222 1783 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Scfd1Q8BRF7 Mansc4-201ENSMUST00000100780 1125 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Scfd1Q8BRF7 Oraov1-203ENSMUST00000105895 1016 ntAPPRIS ALT2 TSL 2 BASIC18.92■□□□□ 0.62
Scfd1Q8BRF7 Eapp-203ENSMUST00000160085 676 ntTSL 3 BASIC18.92■□□□□ 0.62
Scfd1Q8BRF7 9530052E02Rik-201ENSMUST00000180750 949 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Scfd1Q8BRF7 Mir8098-201ENSMUST00000184011 137 ntBASIC18.92■□□□□ 0.62
Scfd1Q8BRF7 Gm45890-204ENSMUST00000212356 545 ntTSL 2 BASIC18.92■□□□□ 0.62
Scfd1Q8BRF7 AC159641.1-201ENSMUST00000221117 177 ntTSL 3 BASIC18.92■□□□□ 0.62
Scfd1Q8BRF7 CT009713.7-201ENSMUST00000224689 571 ntBASIC18.92■□□□□ 0.62
Scfd1Q8BRF7 Mgarp-201ENSMUST00000038154 1232 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Scfd1Q8BRF7 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
Scfd1Q8BRF7 Nat8f3-202ENSMUST00000168531 1347 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Scfd1Q8BRF7 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Scfd1Q8BRF7 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
Scfd1Q8BRF7 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Scfd1Q8BRF7 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Scfd1Q8BRF7 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Scfd1Q8BRF7 Ubl7-201ENSMUST00000163329 1364 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
Scfd1Q8BRF7 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Scfd1Q8BRF7 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Scfd1Q8BRF7 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Scfd1Q8BRF7 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC18.91■□□□□ 0.62
Scfd1Q8BRF7 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Scfd1Q8BRF7 9130019P16Rik-201ENSMUST00000135612 1019 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Scfd1Q8BRF7 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC18.91■□□□□ 0.62
Scfd1Q8BRF7 Gm26661-201ENSMUST00000181025 471 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
Scfd1Q8BRF7 Zfp524-203ENSMUST00000209030 1128 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
Scfd1Q8BRF7 Nudt14-203ENSMUST00000221497 355 ntTSL 2 BASIC18.91■□□□□ 0.62
Scfd1Q8BRF7 AC159301.1-201ENSMUST00000225130 1182 ntBASIC18.91■□□□□ 0.62
Scfd1Q8BRF7 Mzt1-203ENSMUST00000227948 952 ntBASIC18.91■□□□□ 0.62
Scfd1Q8BRF7 Fcnb-201ENSMUST00000028179 1170 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Scfd1Q8BRF7 Hexb-201ENSMUST00000022169 1905 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Scfd1Q8BRF7 Coq6-201ENSMUST00000021661 1602 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Scfd1Q8BRF7 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Scfd1Q8BRF7 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Scfd1Q8BRF7 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Scfd1Q8BRF7 Pofut1-203ENSMUST00000099192 1385 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Scfd1Q8BRF7 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Scfd1Q8BRF7 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Scfd1Q8BRF7 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Scfd1Q8BRF7 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
Scfd1Q8BRF7 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Scfd1Q8BRF7 Gm9889-202ENSMUST00000206983 1577 ntBASIC18.9■□□□□ 0.62
Scfd1Q8BRF7 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Scfd1Q8BRF7 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Scfd1Q8BRF7 Gm27867-201ENSMUST00000184778 125 ntBASIC18.9■□□□□ 0.62
Scfd1Q8BRF7 AC114585.2-202ENSMUST00000228094 426 ntBASIC18.9■□□□□ 0.62
Scfd1Q8BRF7 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Scfd1Q8BRF7 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC18.9■□□□□ 0.62
Scfd1Q8BRF7 Mrm2-201ENSMUST00000031536 1443 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Scfd1Q8BRF7 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC18.9■□□□□ 0.62
Scfd1Q8BRF7 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Scfd1Q8BRF7 Gm13884-201ENSMUST00000118103 829 ntBASIC18.89■□□□□ 0.61
Scfd1Q8BRF7 Oip5-202ENSMUST00000123818 1082 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Scfd1Q8BRF7 Chd3os-202ENSMUST00000151617 389 ntTSL 3 BASIC18.89■□□□□ 0.61
Scfd1Q8BRF7 Gm31727-201ENSMUST00000210102 360 ntTSL 3 BASIC18.89■□□□□ 0.61
Scfd1Q8BRF7 Mrps18a-201ENSMUST00000024763 884 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Scfd1Q8BRF7 Prdx6-201ENSMUST00000051925 959 ntTSL 2 BASIC18.89■□□□□ 0.61
Scfd1Q8BRF7 Mif4gd-201ENSMUST00000021087 1372 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Scfd1Q8BRF7 Dohh-201ENSMUST00000072751 1444 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Scfd1Q8BRF7 Ankrd61-202ENSMUST00000110717 1498 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
Scfd1Q8BRF7 Gm13283-201ENSMUST00000191112 1463 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
Scfd1Q8BRF7 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Scfd1Q8BRF7 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Scfd1Q8BRF7 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Scfd1Q8BRF7 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Scfd1Q8BRF7 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Scfd1Q8BRF7 Gm16401-202ENSMUST00000197463 2074 ntBASIC18.88■□□□□ 0.61
Scfd1Q8BRF7 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Scfd1Q8BRF7 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
Scfd1Q8BRF7 Bex1-203ENSMUST00000113120 718 ntAPPRIS P1 TSL 3 BASIC18.88■□□□□ 0.61
Scfd1Q8BRF7 Trmt112-202ENSMUST00000116551 985 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Scfd1Q8BRF7 Zfp133-ps-202ENSMUST00000124788 1079 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Scfd1Q8BRF7 Gm12536-201ENSMUST00000129102 358 ntTSL 2 BASIC18.88■□□□□ 0.61
Scfd1Q8BRF7 Hnrnpa1l2-ps-201ENSMUST00000129154 964 ntBASIC18.88■□□□□ 0.61
Scfd1Q8BRF7 Cmtm5-203ENSMUST00000227441 610 ntBASIC18.88■□□□□ 0.61
Scfd1Q8BRF7 Il17b-201ENSMUST00000025471 692 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Scfd1Q8BRF7 Psmg3-201ENSMUST00000031531 883 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Retrieved 100 of 76,532 protein–RNA pairs in 27 ms