Protein–RNA interactions for Protein: Q8BKX6

Smg1, Serine/threonine-protein kinase SMG1, mousemouse

Known RBP Predictions only

Length 3,658 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smg1Q8BKX6 Gm44945-201ENSMUST00000206764 1187 ntBASIC14.02□□□□□ -0.17
Smg1Q8BKX6 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Smg1Q8BKX6 Hbs1l-203ENSMUST00000092674 2625 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Smg1Q8BKX6 Nudt14-203ENSMUST00000221497 355 ntTSL 2 BASIC14.01□□□□□ -0.17
Smg1Q8BKX6 Gm2109-201ENSMUST00000189326 1409 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Smg1Q8BKX6 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Smg1Q8BKX6 Mef2b-205ENSMUST00000163756 1337 ntAPPRIS P3 TSL 2 BASIC14.01□□□□□ -0.17
Smg1Q8BKX6 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Smg1Q8BKX6 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Smg1Q8BKX6 Ndufa1-201ENSMUST00000016571 419 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Smg1Q8BKX6 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Smg1Q8BKX6 Flg-204ENSMUST00000178752 756 ntAPPRIS ALT2 BASIC14.01□□□□□ -0.17
Smg1Q8BKX6 Snapc2-203ENSMUST00000208316 1190 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Smg1Q8BKX6 Mrpl54-201ENSMUST00000046114 604 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Smg1Q8BKX6 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Smg1Q8BKX6 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Smg1Q8BKX6 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Smg1Q8BKX6 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Smg1Q8BKX6 Eef1akmt4-201ENSMUST00000115522 1130 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Smg1Q8BKX6 Gm11780-201ENSMUST00000136880 516 ntBASIC14.01□□□□□ -0.17
Smg1Q8BKX6 Gm35911-201ENSMUST00000198837 677 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Smg1Q8BKX6 Trim28-201ENSMUST00000005705 3245 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Smg1Q8BKX6 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Smg1Q8BKX6 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC14.01□□□□□ -0.17
Smg1Q8BKX6 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC14□□□□□ -0.17
Smg1Q8BKX6 Miox-201ENSMUST00000023282 1130 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Smg1Q8BKX6 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Smg1Q8BKX6 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC14□□□□□ -0.17
Smg1Q8BKX6 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Smg1Q8BKX6 Pld5-202ENSMUST00000111166 1370 ntTSL 1 (best) BASIC14□□□□□ -0.17
Smg1Q8BKX6 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Smg1Q8BKX6 Cyp11b2-201ENSMUST00000167634 1625 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Smg1Q8BKX6 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Smg1Q8BKX6 Rap1gap-202ENSMUST00000097837 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Smg1Q8BKX6 Znrf1-213ENSMUST00000174333 515 ntTSL 3 BASIC14□□□□□ -0.17
Smg1Q8BKX6 Gm30684-201ENSMUST00000205632 600 ntTSL 3 BASIC14□□□□□ -0.17
Smg1Q8BKX6 Arhgef33-209ENSMUST00000225223 714 ntBASIC14□□□□□ -0.17
Smg1Q8BKX6 Timm10b-201ENSMUST00000058333 694 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
Smg1Q8BKX6 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC14□□□□□ -0.17
Smg1Q8BKX6 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Smg1Q8BKX6 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Smg1Q8BKX6 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Smg1Q8BKX6 Gnaz-201ENSMUST00000037813 3519 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Smg1Q8BKX6 Runx2os2-201ENSMUST00000161664 818 ntTSL 1 (best) BASIC14□□□□□ -0.17
Smg1Q8BKX6 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC14□□□□□ -0.17
Smg1Q8BKX6 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC13.99□□□□□ -0.17
Smg1Q8BKX6 Ch25h-201ENSMUST00000050562 1350 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
Smg1Q8BKX6 1700037H04Rik-202ENSMUST00000103188 1241 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
Smg1Q8BKX6 Thap3-202ENSMUST00000105665 832 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Smg1Q8BKX6 Crybb1-202ENSMUST00000112375 793 ntAPPRIS P1 TSL 3 BASIC13.99□□□□□ -0.17
Smg1Q8BKX6 Haghl-207ENSMUST00000140738 1194 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Smg1Q8BKX6 Chd3os-202ENSMUST00000151617 389 ntTSL 3 BASIC13.99□□□□□ -0.17
Smg1Q8BKX6 Zdhhc23-202ENSMUST00000165648 1278 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Smg1Q8BKX6 Mrpl46-201ENSMUST00000032841 1134 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Smg1Q8BKX6 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Smg1Q8BKX6 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Smg1Q8BKX6 Bcl2l2-204ENSMUST00000172844 498 ntTSL 5 BASIC13.99□□□□□ -0.17
Smg1Q8BKX6 Echdc2-201ENSMUST00000052999 1307 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Smg1Q8BKX6 Agk-201ENSMUST00000031977 2531 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Smg1Q8BKX6 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Smg1Q8BKX6 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Smg1Q8BKX6 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Smg1Q8BKX6 Mfsd4b3-201ENSMUST00000095749 1787 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Smg1Q8BKX6 Tmem208-201ENSMUST00000015000 785 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Smg1Q8BKX6 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC13.99□□□□□ -0.17
Smg1Q8BKX6 1700086L19Rik-201ENSMUST00000095617 706 ntBASIC13.99□□□□□ -0.17
Smg1Q8BKX6 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Smg1Q8BKX6 Myef2-201ENSMUST00000067780 2999 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
Smg1Q8BKX6 Iqcj-201ENSMUST00000063263 1579 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Smg1Q8BKX6 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
Smg1Q8BKX6 Jam2-201ENSMUST00000098407 1998 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Smg1Q8BKX6 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
Smg1Q8BKX6 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Smg1Q8BKX6 Abhd18-206ENSMUST00000203650 797 ntTSL 5 BASIC13.98□□□□□ -0.17
Smg1Q8BKX6 Vsig2-206ENSMUST00000215957 851 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Smg1Q8BKX6 Fam103a1-202ENSMUST00000118190 1391 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Smg1Q8BKX6 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
Smg1Q8BKX6 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Smg1Q8BKX6 Fam46b-201ENSMUST00000051676 2287 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Smg1Q8BKX6 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC13.98□□□□□ -0.17
Smg1Q8BKX6 Gm13186-201ENSMUST00000118031 316 ntBASIC13.98□□□□□ -0.17
Smg1Q8BKX6 Gm13962-201ENSMUST00000131512 611 ntTSL 5 BASIC13.98□□□□□ -0.17
Smg1Q8BKX6 Fcgrt-203ENSMUST00000210642 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Smg1Q8BKX6 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Smg1Q8BKX6 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Smg1Q8BKX6 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Smg1Q8BKX6 Pgam1-ps1-201ENSMUST00000119107 749 ntBASIC13.97□□□□□ -0.17
Smg1Q8BKX6 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
Smg1Q8BKX6 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC13.97□□□□□ -0.17
Smg1Q8BKX6 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Smg1Q8BKX6 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC13.97□□□□□ -0.17
Smg1Q8BKX6 Gm2694-204ENSMUST00000181898 1303 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Smg1Q8BKX6 Gm6184-201ENSMUST00000120403 1261 ntBASIC13.97□□□□□ -0.17
Smg1Q8BKX6 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Smg1Q8BKX6 Olfr601-201ENSMUST00000080474 990 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
Smg1Q8BKX6 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC13.97□□□□□ -0.17
Smg1Q8BKX6 Gatc-201ENSMUST00000139167 1797 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Smg1Q8BKX6 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Smg1Q8BKX6 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Smg1Q8BKX6 Kcnq2-201ENSMUST00000016491 3067 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 49.2 ms