Protein–RNA interactions for Protein: Q8BJL0

Smarcal1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A-like protein 1, mousemouse

Predictions only

Length 910 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcal1Q8BJL0 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Smarcal1Q8BJL0 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Smarcal1Q8BJL0 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
Smarcal1Q8BJL0 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC17.62■□□□□ 0.41
Smarcal1Q8BJL0 Gm42939-201ENSMUST00000197514 2205 ntBASIC17.62■□□□□ 0.41
Smarcal1Q8BJL0 Cldn7-203ENSMUST00000108596 664 ntTSL 3 BASIC17.62■□□□□ 0.41
Smarcal1Q8BJL0 Timm23-201ENSMUST00000013845 1173 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Smarcal1Q8BJL0 Gm18206-201ENSMUST00000207027 926 ntBASIC17.62■□□□□ 0.41
Smarcal1Q8BJL0 Cenpp-201ENSMUST00000021818 1144 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Smarcal1Q8BJL0 AC114585.2-202ENSMUST00000228094 426 ntBASIC17.62■□□□□ 0.41
Smarcal1Q8BJL0 1700019N19Rik-201ENSMUST00000028299 970 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Smarcal1Q8BJL0 Olfr632-201ENSMUST00000098189 954 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
Smarcal1Q8BJL0 Haghl-201ENSMUST00000077938 1405 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Smarcal1Q8BJL0 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Smarcal1Q8BJL0 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
Smarcal1Q8BJL0 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Smarcal1Q8BJL0 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Smarcal1Q8BJL0 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Smarcal1Q8BJL0 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
Smarcal1Q8BJL0 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Smarcal1Q8BJL0 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Smarcal1Q8BJL0 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Smarcal1Q8BJL0 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Smarcal1Q8BJL0 Rhoc-202ENSMUST00000106787 959 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
Smarcal1Q8BJL0 Cox6c-205ENSMUST00000156915 606 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
Smarcal1Q8BJL0 Cabp2-205ENSMUST00000162908 911 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
Smarcal1Q8BJL0 Nabp2-204ENSMUST00000166608 979 ntTSL 5 BASIC17.61■□□□□ 0.41
Smarcal1Q8BJL0 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Smarcal1Q8BJL0 D030044L04Rik-201ENSMUST00000204220 1291 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Smarcal1Q8BJL0 Mtus2-201ENSMUST00000071878 1211 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Smarcal1Q8BJL0 Ahsa1-201ENSMUST00000021425 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Smarcal1Q8BJL0 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Smarcal1Q8BJL0 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Smarcal1Q8BJL0 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC17.61■□□□□ 0.41
Smarcal1Q8BJL0 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC17.6■□□□□ 0.41
Smarcal1Q8BJL0 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Smarcal1Q8BJL0 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC17.6■□□□□ 0.41
Smarcal1Q8BJL0 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
Smarcal1Q8BJL0 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Smarcal1Q8BJL0 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Smarcal1Q8BJL0 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Smarcal1Q8BJL0 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Smarcal1Q8BJL0 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC17.6■□□□□ 0.41
Smarcal1Q8BJL0 Trmt112-202ENSMUST00000116551 985 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Smarcal1Q8BJL0 4930477E14Rik-201ENSMUST00000181412 621 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Smarcal1Q8BJL0 Gm44202-201ENSMUST00000203549 532 ntTSL 3 BASIC17.6■□□□□ 0.41
Smarcal1Q8BJL0 Rbfox2-207ENSMUST00000227533 1041 ntBASIC17.6■□□□□ 0.41
Smarcal1Q8BJL0 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Smarcal1Q8BJL0 Gm15442-201ENSMUST00000117905 1527 ntBASIC17.6■□□□□ 0.41
Smarcal1Q8BJL0 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
Smarcal1Q8BJL0 CT010456.1-201ENSMUST00000222465 1688 ntTSL 5 BASIC17.6■□□□□ 0.41
Smarcal1Q8BJL0 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Smarcal1Q8BJL0 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Smarcal1Q8BJL0 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Smarcal1Q8BJL0 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Smarcal1Q8BJL0 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Smarcal1Q8BJL0 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
Smarcal1Q8BJL0 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Smarcal1Q8BJL0 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Smarcal1Q8BJL0 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC17.59■□□□□ 0.41
Smarcal1Q8BJL0 Bud23-201ENSMUST00000071677 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Smarcal1Q8BJL0 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Smarcal1Q8BJL0 Gm18856-201ENSMUST00000178096 1374 ntBASIC17.59■□□□□ 0.41
Smarcal1Q8BJL0 Gm5712-201ENSMUST00000199748 1043 ntBASIC17.59■□□□□ 0.41
Smarcal1Q8BJL0 Spata33-204ENSMUST00000212346 715 ntTSL 2 BASIC17.59■□□□□ 0.41
Smarcal1Q8BJL0 Gm5867-201ENSMUST00000063197 592 ntBASIC17.59■□□□□ 0.41
Smarcal1Q8BJL0 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Smarcal1Q8BJL0 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Smarcal1Q8BJL0 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Smarcal1Q8BJL0 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Smarcal1Q8BJL0 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Smarcal1Q8BJL0 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
Smarcal1Q8BJL0 Pcbp4-201ENSMUST00000024260 2035 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Smarcal1Q8BJL0 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Smarcal1Q8BJL0 Npcd-202ENSMUST00000089299 1453 ntAPPRIS P4 TSL 1 (best) BASIC17.58■□□□□ 0.41
Smarcal1Q8BJL0 Ppil3-204ENSMUST00000117069 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Smarcal1Q8BJL0 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Smarcal1Q8BJL0 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Smarcal1Q8BJL0 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Smarcal1Q8BJL0 Rplp2-203ENSMUST00000106004 421 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.4
Smarcal1Q8BJL0 Smarca5-ps-202ENSMUST00000171805 1284 ntBASIC17.58■□□□□ 0.4
Smarcal1Q8BJL0 Gm44357-201ENSMUST00000195897 142 ntBASIC17.58■□□□□ 0.4
Smarcal1Q8BJL0 Gm19658-201ENSMUST00000196231 138 ntBASIC17.58■□□□□ 0.4
Smarcal1Q8BJL0 Gm44367-201ENSMUST00000196836 138 ntBASIC17.58■□□□□ 0.4
Smarcal1Q8BJL0 Gm44350-201ENSMUST00000197197 138 ntBASIC17.58■□□□□ 0.4
Smarcal1Q8BJL0 Gm44390-201ENSMUST00000197533 144 ntBASIC17.58■□□□□ 0.4
Smarcal1Q8BJL0 Gm44313-201ENSMUST00000198018 138 ntBASIC17.58■□□□□ 0.4
Smarcal1Q8BJL0 Gm44486-201ENSMUST00000198508 138 ntBASIC17.58■□□□□ 0.4
Smarcal1Q8BJL0 Gm44314-201ENSMUST00000199263 138 ntBASIC17.58■□□□□ 0.4
Smarcal1Q8BJL0 Gm44394-201ENSMUST00000199558 138 ntBASIC17.58■□□□□ 0.4
Smarcal1Q8BJL0 Gm44484-201ENSMUST00000199873 138 ntBASIC17.58■□□□□ 0.4
Smarcal1Q8BJL0 Gm44466-201ENSMUST00000200264 138 ntBASIC17.58■□□□□ 0.4
Smarcal1Q8BJL0 Gm44359-201ENSMUST00000200671 138 ntBASIC17.58■□□□□ 0.4
Smarcal1Q8BJL0 Gm10060-201ENSMUST00000212002 111 ntBASIC17.58■□□□□ 0.4
Smarcal1Q8BJL0 Ythdf2-201ENSMUST00000085181 955 ntTSL 2 BASIC17.58■□□□□ 0.4
Smarcal1Q8BJL0 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Smarcal1Q8BJL0 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Smarcal1Q8BJL0 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC17.58■□□□□ 0.4
Smarcal1Q8BJL0 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC17.58■□□□□ 0.4
Smarcal1Q8BJL0 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 22.5 ms