Protein–RNA interactions for Protein: Q8BI21

Rnf38, E3 ubiquitin-protein ligase RNF38, mousemouse

Predictions only

Length 518 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf38Q8BI21 Hira-202ENSMUST00000120532 2063 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Rnf38Q8BI21 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Rnf38Q8BI21 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.16
Rnf38Q8BI21 Lrch1-205ENSMUST00000228252 3125 ntAPPRIS ALT2 BASIC16.02■□□□□ 0.16
Rnf38Q8BI21 Sbk2-202ENSMUST00000182214 2236 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
Rnf38Q8BI21 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC16.02■□□□□ 0.16
Rnf38Q8BI21 Kri1-205ENSMUST00000184326 2490 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.16
Rnf38Q8BI21 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC16.02■□□□□ 0.16
Rnf38Q8BI21 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.16
Rnf38Q8BI21 Gm9731-201ENSMUST00000209480 747 ntBASIC16.02■□□□□ 0.16
Rnf38Q8BI21 AC154649.1-201ENSMUST00000227392 384 ntBASIC16.02■□□□□ 0.16
Rnf38Q8BI21 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Rnf38Q8BI21 Tbx18-201ENSMUST00000034991 4679 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Rnf38Q8BI21 Spock3-204ENSMUST00000119068 3201 ntAPPRIS P3 TSL 5 BASIC16.02■□□□□ 0.16
Rnf38Q8BI21 Lrch3-210ENSMUST00000170201 2902 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.15
Rnf38Q8BI21 Tap1-201ENSMUST00000041633 2614 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.15
Rnf38Q8BI21 Tmem65-201ENSMUST00000072113 3747 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Rnf38Q8BI21 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Rnf38Q8BI21 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
Rnf38Q8BI21 Rbfox2-204ENSMUST00000171751 3558 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
Rnf38Q8BI21 CT010478.1-201ENSMUST00000220747 2787 ntBASIC16.02■□□□□ 0.15
Rnf38Q8BI21 Fam185a-201ENSMUST00000056045 3027 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Rnf38Q8BI21 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Rnf38Q8BI21 Fmnl3-203ENSMUST00000120633 4290 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.15
Rnf38Q8BI21 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC16.02■□□□□ 0.15
Rnf38Q8BI21 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Rnf38Q8BI21 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Rnf38Q8BI21 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.15
Rnf38Q8BI21 Shroom3-211ENSMUST00000225438 5742 ntBASIC16.01■□□□□ 0.15
Rnf38Q8BI21 Tuba1c-201ENSMUST00000058914 1977 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Rnf38Q8BI21 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Rnf38Q8BI21 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC16.01■□□□□ 0.15
Rnf38Q8BI21 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC16.01■□□□□ 0.15
Rnf38Q8BI21 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC16.01■□□□□ 0.15
Rnf38Q8BI21 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Rnf38Q8BI21 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Rnf38Q8BI21 Cbx8-201ENSMUST00000026663 3580 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Rnf38Q8BI21 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Rnf38Q8BI21 Hspa1b-201ENSMUST00000172753 2803 ntAPPRIS P1 BASIC16.01■□□□□ 0.15
Rnf38Q8BI21 Fars2-201ENSMUST00000021857 2125 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Rnf38Q8BI21 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Rnf38Q8BI21 Taz-201ENSMUST00000069722 1851 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
Rnf38Q8BI21 Wnt10b-206ENSMUST00000228546 2709 ntBASIC16.01■□□□□ 0.15
Rnf38Q8BI21 Dsg2-202ENSMUST00000120102 3590 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Rnf38Q8BI21 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC16■□□□□ 0.15
Rnf38Q8BI21 Galnt18-201ENSMUST00000049430 2575 ntTSL 1 (best) BASIC16■□□□□ 0.15
Rnf38Q8BI21 Mtx2-201ENSMUST00000028511 2950 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Rnf38Q8BI21 Cog8-201ENSMUST00000034391 2954 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Rnf38Q8BI21 Gdf5-201ENSMUST00000040162 2320 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Rnf38Q8BI21 Apeh-206ENSMUST00000193254 2518 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Rnf38Q8BI21 Tuba8-201ENSMUST00000032233 2263 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Rnf38Q8BI21 Dnal4-201ENSMUST00000023055 1469 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Rnf38Q8BI21 Gm38027-201ENSMUST00000192315 235 ntBASIC16■□□□□ 0.15
Rnf38Q8BI21 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC16■□□□□ 0.15
Rnf38Q8BI21 Esrp1-202ENSMUST00000108310 2781 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
Rnf38Q8BI21 Taok3-203ENSMUST00000111978 4467 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Rnf38Q8BI21 Nkpd1-202ENSMUST00000207576 2916 ntAPPRIS P2 TSL 5 BASIC16■□□□□ 0.15
Rnf38Q8BI21 Vstm5-201ENSMUST00000034413 1991 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Rnf38Q8BI21 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC16■□□□□ 0.15
Rnf38Q8BI21 Fam178b-202ENSMUST00000170295 2286 ntAPPRIS ALT2 TSL 5 BASIC15.99■□□□□ 0.15
Rnf38Q8BI21 Ccdc51-201ENSMUST00000026735 1526 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Rnf38Q8BI21 Gal3st1-201ENSMUST00000063004 1879 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Rnf38Q8BI21 Mars-201ENSMUST00000037290 2939 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Rnf38Q8BI21 Nucb2-201ENSMUST00000032895 1685 ntAPPRIS P2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Rnf38Q8BI21 Adnp2-201ENSMUST00000066743 5012 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Rnf38Q8BI21 H2afy2-201ENSMUST00000020283 2175 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Rnf38Q8BI21 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC15.99■□□□□ 0.15
Rnf38Q8BI21 Zfp219-212ENSMUST00000228580 2812 ntAPPRIS ALT2 BASIC15.99■□□□□ 0.15
Rnf38Q8BI21 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC15.99■□□□□ 0.15
Rnf38Q8BI21 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC15.99■□□□□ 0.15
Rnf38Q8BI21 AC153881.1-201ENSMUST00000214448 284 ntBASIC15.99■□□□□ 0.15
Rnf38Q8BI21 AC120002.2-201ENSMUST00000220205 773 ntBASIC15.99■□□□□ 0.15
Rnf38Q8BI21 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Rnf38Q8BI21 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Rnf38Q8BI21 Gm9867-201ENSMUST00000192212 2647 ntBASIC15.99■□□□□ 0.15
Rnf38Q8BI21 AC093043.3-201ENSMUST00000226531 2273 ntBASIC15.99■□□□□ 0.15
Rnf38Q8BI21 Med15-202ENSMUST00000080936 3263 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Rnf38Q8BI21 Dmpk-203ENSMUST00000108474 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Rnf38Q8BI21 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Rnf38Q8BI21 Pbx4-201ENSMUST00000081503 1560 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
Rnf38Q8BI21 Gnao1-207ENSMUST00000138659 5526 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Rnf38Q8BI21 Rft1-201ENSMUST00000064230 2387 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Rnf38Q8BI21 Snap91-204ENSMUST00000098495 4150 ntAPPRIS P4 TSL 1 (best) BASIC15.99■□□□□ 0.15
Rnf38Q8BI21 Col17a1-202ENSMUST00000086923 5477 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
Rnf38Q8BI21 Asap2-201ENSMUST00000050990 3345 ntAPPRIS ALT2 TSL 5 BASIC15.99■□□□□ 0.15
Rnf38Q8BI21 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Rnf38Q8BI21 Mccc1-201ENSMUST00000029259 2455 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Rnf38Q8BI21 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC15.99■□□□□ 0.15
Rnf38Q8BI21 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC15.98■□□□□ 0.15
Rnf38Q8BI21 Ankrd10-201ENSMUST00000033905 2285 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Rnf38Q8BI21 Stxbp3-201ENSMUST00000102621 2419 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Rnf38Q8BI21 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Rnf38Q8BI21 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Rnf38Q8BI21 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Rnf38Q8BI21 Kbtbd2-201ENSMUST00000114321 3868 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Rnf38Q8BI21 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC15.98■□□□□ 0.15
Rnf38Q8BI21 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Rnf38Q8BI21 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
Rnf38Q8BI21 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC15.98■□□□□ 0.15
Rnf38Q8BI21 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Retrieved 100 of 76,532 protein–RNA pairs in 15.7 ms