Protein–RNA interactions for Protein: Q8BH88

Depdc1b, DEP domain-containing protein 1B, mousemouse

Predictions only

Length 529 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Depdc1bQ8BH88 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Depdc1bQ8BH88 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Depdc1bQ8BH88 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Depdc1bQ8BH88 Chn1-209ENSMUST00000166199 3876 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Depdc1bQ8BH88 Iqsec1-202ENSMUST00000101153 8036 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
Depdc1bQ8BH88 Efr3a-201ENSMUST00000015146 5215 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Depdc1bQ8BH88 Tppp3-201ENSMUST00000014990 1127 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Depdc1bQ8BH88 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Depdc1bQ8BH88 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Depdc1bQ8BH88 Pfdn6-201ENSMUST00000025163 807 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Depdc1bQ8BH88 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
Depdc1bQ8BH88 Lmo4-203ENSMUST00000121796 1417 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Depdc1bQ8BH88 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Depdc1bQ8BH88 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
Depdc1bQ8BH88 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC18.04■□□□□ 0.48
Depdc1bQ8BH88 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
Depdc1bQ8BH88 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Depdc1bQ8BH88 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Depdc1bQ8BH88 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Depdc1bQ8BH88 Abcd4-201ENSMUST00000021666 2309 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Depdc1bQ8BH88 E2f2-201ENSMUST00000061721 4739 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Depdc1bQ8BH88 0610010K14Rik-207ENSMUST00000108577 659 ntTSL 5 BASIC18.03■□□□□ 0.48
Depdc1bQ8BH88 D3Ertd751e-205ENSMUST00000120167 773 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
Depdc1bQ8BH88 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC18.03■□□□□ 0.48
Depdc1bQ8BH88 Gm16061-201ENSMUST00000122167 857 ntBASIC18.03■□□□□ 0.48
Depdc1bQ8BH88 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC18.03■□□□□ 0.48
Depdc1bQ8BH88 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC18.03■□□□□ 0.48
Depdc1bQ8BH88 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Depdc1bQ8BH88 Gna12-201ENSMUST00000000153 3416 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Depdc1bQ8BH88 Ttl-201ENSMUST00000035812 4567 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Depdc1bQ8BH88 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Depdc1bQ8BH88 Itga6-201ENSMUST00000028522 4310 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
Depdc1bQ8BH88 Parg-201ENSMUST00000022470 4413 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Depdc1bQ8BH88 Bicd2-201ENSMUST00000048544 6309 ntAPPRIS P4 TSL 1 (best) BASIC18.03■□□□□ 0.48
Depdc1bQ8BH88 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Depdc1bQ8BH88 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.48
Depdc1bQ8BH88 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Depdc1bQ8BH88 Robo3-202ENSMUST00000115038 4797 ntAPPRIS P2 TSL 5 BASIC18.02■□□□□ 0.48
Depdc1bQ8BH88 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Depdc1bQ8BH88 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC18.02■□□□□ 0.48
Depdc1bQ8BH88 Fmnl3-203ENSMUST00000120633 4290 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.48
Depdc1bQ8BH88 AA414768-201ENSMUST00000121924 1257 ntBASIC18.02■□□□□ 0.48
Depdc1bQ8BH88 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Depdc1bQ8BH88 Lmbrd1-202ENSMUST00000186096 688 ntTSL 2 BASIC18.02■□□□□ 0.48
Depdc1bQ8BH88 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC18.02■□□□□ 0.48
Depdc1bQ8BH88 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC18.02■□□□□ 0.48
Depdc1bQ8BH88 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Depdc1bQ8BH88 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.48
Depdc1bQ8BH88 Birc5-201ENSMUST00000081387 947 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Depdc1bQ8BH88 Wipi2-201ENSMUST00000036872 5171 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
Depdc1bQ8BH88 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.47
Depdc1bQ8BH88 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.47
Depdc1bQ8BH88 Ddx51-201ENSMUST00000031478 4846 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Depdc1bQ8BH88 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC18.02■□□□□ 0.47
Depdc1bQ8BH88 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
Depdc1bQ8BH88 Casd1-201ENSMUST00000015333 3961 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Depdc1bQ8BH88 Iars2-201ENSMUST00000027921 5471 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Depdc1bQ8BH88 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Depdc1bQ8BH88 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Depdc1bQ8BH88 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
Depdc1bQ8BH88 Gm26596-201ENSMUST00000180464 2655 ntBASIC18.01■□□□□ 0.47
Depdc1bQ8BH88 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Depdc1bQ8BH88 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC18.01■□□□□ 0.47
Depdc1bQ8BH88 Gm36858-201ENSMUST00000194501 2391 ntBASIC18.01■□□□□ 0.47
Depdc1bQ8BH88 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Depdc1bQ8BH88 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Depdc1bQ8BH88 Gm6728-201ENSMUST00000178117 1065 ntBASIC18.01■□□□□ 0.47
Depdc1bQ8BH88 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
Depdc1bQ8BH88 Gm4217-201ENSMUST00000182243 1002 ntBASIC18.01■□□□□ 0.47
Depdc1bQ8BH88 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Depdc1bQ8BH88 Antxr2-201ENSMUST00000031281 5656 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Depdc1bQ8BH88 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
Depdc1bQ8BH88 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Depdc1bQ8BH88 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Depdc1bQ8BH88 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Depdc1bQ8BH88 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC18.01■□□□□ 0.47
Depdc1bQ8BH88 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC18■□□□□ 0.47
Depdc1bQ8BH88 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
Depdc1bQ8BH88 Klhl29-201ENSMUST00000020958 7041 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Depdc1bQ8BH88 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Depdc1bQ8BH88 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
Depdc1bQ8BH88 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
Depdc1bQ8BH88 Bard1-201ENSMUST00000027393 5659 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Depdc1bQ8BH88 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Depdc1bQ8BH88 Znhit1-203ENSMUST00000111090 698 ntTSL 2 BASIC18■□□□□ 0.47
Depdc1bQ8BH88 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Depdc1bQ8BH88 Gm13474-201ENSMUST00000122466 815 ntBASIC18■□□□□ 0.47
Depdc1bQ8BH88 Gm22697-201ENSMUST00000175194 63 ntBASIC18■□□□□ 0.47
Depdc1bQ8BH88 Gm7367-201ENSMUST00000057611 492 ntBASIC18■□□□□ 0.47
Depdc1bQ8BH88 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC18■□□□□ 0.47
Depdc1bQ8BH88 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC18■□□□□ 0.47
Depdc1bQ8BH88 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC18■□□□□ 0.47
Depdc1bQ8BH88 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC18■□□□□ 0.47
Depdc1bQ8BH88 Dok4-201ENSMUST00000046461 2590 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Depdc1bQ8BH88 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Depdc1bQ8BH88 Rabep1-201ENSMUST00000076270 5408 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
Depdc1bQ8BH88 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
Depdc1bQ8BH88 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Depdc1bQ8BH88 Zpbp2-202ENSMUST00000081033 1300 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Depdc1bQ8BH88 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Retrieved 100 of 76,532 protein–RNA pairs in 22.5 ms