Protein–RNA interactions for Protein: Q8BGM5

Best2, Bestrophin-2, mousemouse

Predictions only

Length 508 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Best2Q8BGM5 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Best2Q8BGM5 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Best2Q8BGM5 Rrbp1-201ENSMUST00000016072 5177 ntAPPRIS P4 TSL 5 BASIC17.3■□□□□ 0.36
Best2Q8BGM5 Fosl2-201ENSMUST00000031017 6537 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Best2Q8BGM5 Gm26627-201ENSMUST00000181540 1487 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Best2Q8BGM5 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Best2Q8BGM5 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Best2Q8BGM5 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Best2Q8BGM5 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
Best2Q8BGM5 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Best2Q8BGM5 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
Best2Q8BGM5 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Best2Q8BGM5 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC17.29■□□□□ 0.36
Best2Q8BGM5 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
Best2Q8BGM5 Gm11336-201ENSMUST00000118168 334 ntBASIC17.29■□□□□ 0.36
Best2Q8BGM5 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Best2Q8BGM5 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Best2Q8BGM5 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Best2Q8BGM5 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Best2Q8BGM5 Simc1-202ENSMUST00000121401 4819 ntAPPRIS P2 TSL 5 BASIC17.29■□□□□ 0.36
Best2Q8BGM5 Camk2d-226ENSMUST00000199300 5524 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Best2Q8BGM5 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Best2Q8BGM5 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
Best2Q8BGM5 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Best2Q8BGM5 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC17.29■□□□□ 0.36
Best2Q8BGM5 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
Best2Q8BGM5 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Best2Q8BGM5 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC17.28■□□□□ 0.36
Best2Q8BGM5 Vps37a-201ENSMUST00000098817 6379 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Best2Q8BGM5 Arhgef11-201ENSMUST00000039476 6776 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Best2Q8BGM5 Tpd52-205ENSMUST00000120143 6317 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Best2Q8BGM5 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Best2Q8BGM5 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
Best2Q8BGM5 Crhbp-201ENSMUST00000045583 1701 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Best2Q8BGM5 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
Best2Q8BGM5 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC17.28■□□□□ 0.36
Best2Q8BGM5 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Best2Q8BGM5 Bvht-202ENSMUST00000183087 588 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Best2Q8BGM5 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Best2Q8BGM5 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Best2Q8BGM5 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Best2Q8BGM5 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Best2Q8BGM5 Lgr6-201ENSMUST00000044828 6675 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Best2Q8BGM5 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Best2Q8BGM5 Jade2-202ENSMUST00000109090 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Best2Q8BGM5 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
Best2Q8BGM5 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Best2Q8BGM5 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Best2Q8BGM5 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Best2Q8BGM5 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Best2Q8BGM5 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Best2Q8BGM5 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Best2Q8BGM5 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Best2Q8BGM5 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Best2Q8BGM5 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
Best2Q8BGM5 Gm6659-201ENSMUST00000174752 547 ntBASIC17.27■□□□□ 0.36
Best2Q8BGM5 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC17.27■□□□□ 0.36
Best2Q8BGM5 Gm26827-201ENSMUST00000181911 148 ntTSL 5 BASIC17.27■□□□□ 0.36
Best2Q8BGM5 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Best2Q8BGM5 Zkscan3-204ENSMUST00000117721 5788 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Best2Q8BGM5 Lrp6-201ENSMUST00000032322 9368 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Best2Q8BGM5 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC17.27■□□□□ 0.35
Best2Q8BGM5 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.35
Best2Q8BGM5 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC17.27■□□□□ 0.35
Best2Q8BGM5 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
Best2Q8BGM5 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC17.27■□□□□ 0.35
Best2Q8BGM5 Ddn-201ENSMUST00000075444 3740 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Best2Q8BGM5 Gm45203-201ENSMUST00000206384 1831 ntBASIC17.26■□□□□ 0.35
Best2Q8BGM5 Col17a1-202ENSMUST00000086923 5477 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
Best2Q8BGM5 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Best2Q8BGM5 Zpbp2-202ENSMUST00000081033 1300 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Best2Q8BGM5 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Best2Q8BGM5 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Best2Q8BGM5 Mtmr12-201ENSMUST00000038172 6840 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Best2Q8BGM5 Antxr2-201ENSMUST00000031281 5656 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Best2Q8BGM5 Ripor2-205ENSMUST00000110384 5608 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Best2Q8BGM5 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Best2Q8BGM5 Fbxo9-203ENSMUST00000159099 1201 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Best2Q8BGM5 Ndufs7-201ENSMUST00000020361 758 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Best2Q8BGM5 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Best2Q8BGM5 C530025M09Rik-201ENSMUST00000099264 690 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
Best2Q8BGM5 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC17.26■□□□□ 0.35
Best2Q8BGM5 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
Best2Q8BGM5 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC17.26■□□□□ 0.35
Best2Q8BGM5 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Best2Q8BGM5 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Best2Q8BGM5 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Best2Q8BGM5 Gm16759-204ENSMUST00000191455 4272 ntTSL 5 BASIC17.26■□□□□ 0.35
Best2Q8BGM5 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Best2Q8BGM5 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Best2Q8BGM5 Dnajc3-201ENSMUST00000022734 5141 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Best2Q8BGM5 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Best2Q8BGM5 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC17.25■□□□□ 0.35
Best2Q8BGM5 Isyna1-204ENSMUST00000210005 1914 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
Best2Q8BGM5 Xpo6-213ENSMUST00000168189 4552 ntAPPRIS ALT1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Best2Q8BGM5 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Best2Q8BGM5 Igfbp2-201ENSMUST00000047328 1307 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Best2Q8BGM5 Urah-202ENSMUST00000106050 719 ntAPPRIS ALT2 TSL 2 BASIC17.25■□□□□ 0.35
Best2Q8BGM5 Bpnt1-202ENSMUST00000110965 1046 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Best2Q8BGM5 Gm9013-201ENSMUST00000132939 882 ntBASIC17.25■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 21.1 ms