Protein–RNA interactions for Protein: Q80XG9

Lrrtm4, Leucine-rich repeat transmembrane neuronal protein 4, mousemouse

Predictions only

Length 590 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lrrtm4Q80XG9 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Lrrtm4Q80XG9 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Lrrtm4Q80XG9 Synpo-205ENSMUST00000130044 4970 ntAPPRIS P3 TSL 2 BASIC16.16■□□□□ 0.18
Lrrtm4Q80XG9 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Lrrtm4Q80XG9 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
Lrrtm4Q80XG9 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC16.16■□□□□ 0.18
Lrrtm4Q80XG9 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Lrrtm4Q80XG9 Gm11841-201ENSMUST00000117060 1963 ntBASIC16.15■□□□□ 0.18
Lrrtm4Q80XG9 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Lrrtm4Q80XG9 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Lrrtm4Q80XG9 Crhr2-203ENSMUST00000114374 1440 ntAPPRIS ALT1 TSL 5 BASIC16.15■□□□□ 0.18
Lrrtm4Q80XG9 Mrps12-204ENSMUST00000171183 883 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
Lrrtm4Q80XG9 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
Lrrtm4Q80XG9 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Lrrtm4Q80XG9 Arl5b-206ENSMUST00000193836 481 ntTSL 2 BASIC16.15■□□□□ 0.18
Lrrtm4Q80XG9 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Lrrtm4Q80XG9 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Lrrtm4Q80XG9 Ogfod2-201ENSMUST00000024470 1596 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Lrrtm4Q80XG9 Calb2-201ENSMUST00000003754 1431 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Lrrtm4Q80XG9 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC16.15■□□□□ 0.18
Lrrtm4Q80XG9 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Lrrtm4Q80XG9 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC16.15■□□□□ 0.18
Lrrtm4Q80XG9 Bcor-202ENSMUST00000065143 6839 ntAPPRIS P4 TSL 1 (best) BASIC16.15■□□□□ 0.18
Lrrtm4Q80XG9 Ocel1-201ENSMUST00000002469 1611 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Lrrtm4Q80XG9 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Lrrtm4Q80XG9 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
Lrrtm4Q80XG9 Fhl3-201ENSMUST00000038684 1664 ntTSL 1 (best) BASIC16.14■□□□□ 0.18
Lrrtm4Q80XG9 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
Lrrtm4Q80XG9 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Lrrtm4Q80XG9 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Lrrtm4Q80XG9 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Lrrtm4Q80XG9 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Lrrtm4Q80XG9 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Lrrtm4Q80XG9 Srpx-202ENSMUST00000115543 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Lrrtm4Q80XG9 Rpl36al-201ENSMUST00000054544 526 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Lrrtm4Q80XG9 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Lrrtm4Q80XG9 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Lrrtm4Q80XG9 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Lrrtm4Q80XG9 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Lrrtm4Q80XG9 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
Lrrtm4Q80XG9 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC16.14■□□□□ 0.17
Lrrtm4Q80XG9 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Lrrtm4Q80XG9 Usp49-201ENSMUST00000024779 8252 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Lrrtm4Q80XG9 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Lrrtm4Q80XG9 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC16.13■□□□□ 0.17
Lrrtm4Q80XG9 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Lrrtm4Q80XG9 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Lrrtm4Q80XG9 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC16.13■□□□□ 0.17
Lrrtm4Q80XG9 Myo5b-201ENSMUST00000074157 6745 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Lrrtm4Q80XG9 Dbndd2-204ENSMUST00000109350 1055 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
Lrrtm4Q80XG9 Atp6v1g2-203ENSMUST00000130992 524 ntTSL 2 BASIC16.13■□□□□ 0.17
Lrrtm4Q80XG9 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC16.13■□□□□ 0.17
Lrrtm4Q80XG9 Aicda-202ENSMUST00000160685 1292 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Lrrtm4Q80XG9 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC16.13■□□□□ 0.17
Lrrtm4Q80XG9 Ighv6-1-201ENSMUST00000193612 343 ntBASIC16.13■□□□□ 0.17
Lrrtm4Q80XG9 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC16.13■□□□□ 0.17
Lrrtm4Q80XG9 Ndufb8-201ENSMUST00000026222 680 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Lrrtm4Q80XG9 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Lrrtm4Q80XG9 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
Lrrtm4Q80XG9 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Lrrtm4Q80XG9 Zkscan4-202ENSMUST00000225845 1506 ntBASIC16.13■□□□□ 0.17
Lrrtm4Q80XG9 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Lrrtm4Q80XG9 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Lrrtm4Q80XG9 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Lrrtm4Q80XG9 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
Lrrtm4Q80XG9 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Lrrtm4Q80XG9 Bnipl-201ENSMUST00000098871 1414 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Lrrtm4Q80XG9 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
Lrrtm4Q80XG9 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC16.12■□□□□ 0.17
Lrrtm4Q80XG9 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Lrrtm4Q80XG9 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Lrrtm4Q80XG9 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Lrrtm4Q80XG9 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Lrrtm4Q80XG9 Gm13563-202ENSMUST00000150375 851 ntTSL 3 BASIC16.12■□□□□ 0.17
Lrrtm4Q80XG9 Prm2-201ENSMUST00000037996 621 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Lrrtm4Q80XG9 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Lrrtm4Q80XG9 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
Lrrtm4Q80XG9 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Lrrtm4Q80XG9 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
Lrrtm4Q80XG9 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
Lrrtm4Q80XG9 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
Lrrtm4Q80XG9 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Lrrtm4Q80XG9 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
Lrrtm4Q80XG9 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
Lrrtm4Q80XG9 Rnf38-203ENSMUST00000102934 5240 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
Lrrtm4Q80XG9 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Lrrtm4Q80XG9 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
Lrrtm4Q80XG9 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Lrrtm4Q80XG9 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Lrrtm4Q80XG9 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Lrrtm4Q80XG9 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Lrrtm4Q80XG9 4932702P03Rik-201ENSMUST00000138447 1482 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Lrrtm4Q80XG9 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
Lrrtm4Q80XG9 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Lrrtm4Q80XG9 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Lrrtm4Q80XG9 Adnp2-201ENSMUST00000066743 5012 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Lrrtm4Q80XG9 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Lrrtm4Q80XG9 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Lrrtm4Q80XG9 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Lrrtm4Q80XG9 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 43.7 ms