Protein–RNA interactions for Protein: Q80T79

Csmd3, CUB and sushi domain-containing protein 3, mousemouse

Predictions only

Length 3,707 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Csmd3Q80T79 1700028B04Rik-202ENSMUST00000190841 971 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Csmd3Q80T79 Eif5-201ENSMUST00000050993 1969 ntAPPRIS P2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Csmd3Q80T79 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
Csmd3Q80T79 Gjb1-202ENSMUST00000119080 1513 ntAPPRIS P1 TSL 3 BASIC11.32□□□□□ -0.6
Csmd3Q80T79 Gm43808-201ENSMUST00000202534 2065 ntBASIC11.32□□□□□ -0.6
Csmd3Q80T79 Pld5-202ENSMUST00000111166 1370 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Csmd3Q80T79 Adprhl1-201ENSMUST00000033825 1372 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Csmd3Q80T79 Plpp7-201ENSMUST00000057423 1947 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Csmd3Q80T79 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Csmd3Q80T79 Gm14317-201ENSMUST00000151754 1464 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Csmd3Q80T79 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Csmd3Q80T79 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC11.31□□□□□ -0.6
Csmd3Q80T79 Pqlc2-205ENSMUST00000172747 1405 ntAPPRIS P2 TSL 5 BASIC11.31□□□□□ -0.6
Csmd3Q80T79 Dhrs7c-205ENSMUST00000168612 1108 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
Csmd3Q80T79 Bcl2l2-204ENSMUST00000172844 498 ntTSL 5 BASIC11.31□□□□□ -0.6
Csmd3Q80T79 Lin37-201ENSMUST00000043975 998 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Csmd3Q80T79 Apof-201ENSMUST00000050901 1258 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Csmd3Q80T79 Drd2-201ENSMUST00000075764 2547 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Csmd3Q80T79 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Csmd3Q80T79 Mvk-201ENSMUST00000043760 1660 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
Csmd3Q80T79 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Csmd3Q80T79 Haghl-201ENSMUST00000077938 1405 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Csmd3Q80T79 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Csmd3Q80T79 Gm11795-201ENSMUST00000127180 396 ntTSL 5 BASIC11.31□□□□□ -0.6
Csmd3Q80T79 Vsig2-206ENSMUST00000215957 851 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Csmd3Q80T79 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Csmd3Q80T79 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Csmd3Q80T79 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC11.31□□□□□ -0.6
Csmd3Q80T79 Polr2i-202ENSMUST00000108192 508 ntTSL 2 BASIC11.31□□□□□ -0.6
Csmd3Q80T79 Gm12497-201ENSMUST00000138778 237 ntBASIC11.31□□□□□ -0.6
Csmd3Q80T79 Gm8349-201ENSMUST00000182720 1003 ntBASIC11.31□□□□□ -0.6
Csmd3Q80T79 1300002E11Rik-207ENSMUST00000211443 767 ntTSL 5 BASIC11.31□□□□□ -0.6
Csmd3Q80T79 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Csmd3Q80T79 Gm10505-201ENSMUST00000151398 1587 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Csmd3Q80T79 Arl5c-201ENSMUST00000042971 1571 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Csmd3Q80T79 Prlhr-201ENSMUST00000051277 1572 ntAPPRIS P1 BASIC11.31□□□□□ -0.6
Csmd3Q80T79 Bfsp2-201ENSMUST00000124310 1662 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Csmd3Q80T79 Enah-210ENSMUST00000193074 1971 ntAPPRIS ALT2 TSL 5 BASIC11.3□□□□□ -0.6
Csmd3Q80T79 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Csmd3Q80T79 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Csmd3Q80T79 Pycrl-201ENSMUST00000053918 1353 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Csmd3Q80T79 Hbb-bh0-201ENSMUST00000124800 129 ntBASIC11.3□□□□□ -0.6
Csmd3Q80T79 Gm20949-201ENSMUST00000206478 952 ntBASIC11.3□□□□□ -0.6
Csmd3Q80T79 AC110091.2-202ENSMUST00000216718 1148 ntTSL 5 BASIC11.3□□□□□ -0.6
Csmd3Q80T79 Ccdc88c-204ENSMUST00000223097 1253 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Csmd3Q80T79 Rapgef6-205ENSMUST00000108895 1829 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Csmd3Q80T79 Glb1-201ENSMUST00000063042 2396 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Csmd3Q80T79 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Csmd3Q80T79 Echdc2-201ENSMUST00000052999 1307 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Csmd3Q80T79 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC11.3□□□□□ -0.6
Csmd3Q80T79 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC11.3□□□□□ -0.6
Csmd3Q80T79 Naa10-203ENSMUST00000114387 979 ntAPPRIS ALT2 TSL 2 BASIC11.3□□□□□ -0.6
Csmd3Q80T79 Hagh-202ENSMUST00000118788 1191 ntAPPRIS P3 TSL 1 (best) BASIC11.3□□□□□ -0.6
Csmd3Q80T79 1700003M07Rik-202ENSMUST00000147634 564 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Csmd3Q80T79 Gm31105-201ENSMUST00000211421 687 ntTSL 2 BASIC11.3□□□□□ -0.6
Csmd3Q80T79 A930016O22Rik-201ENSMUST00000047020 1214 ntTSL 2 BASIC11.3□□□□□ -0.6
Csmd3Q80T79 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC11.3□□□□□ -0.6
Csmd3Q80T79 Snx2-201ENSMUST00000037850 2013 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Csmd3Q80T79 Phykpl-201ENSMUST00000020625 1609 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Csmd3Q80T79 Hsf4-203ENSMUST00000172525 1276 ntTSL 5 BASIC11.3□□□□□ -0.6
Csmd3Q80T79 Pecr-201ENSMUST00000027381 1186 ntAPPRIS P2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Csmd3Q80T79 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC11.3□□□□□ -0.6
Csmd3Q80T79 Sgpp1-201ENSMUST00000021450 3323 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Csmd3Q80T79 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
Csmd3Q80T79 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
Csmd3Q80T79 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC11.29□□□□□ -0.6
Csmd3Q80T79 Caly-202ENSMUST00000166758 1220 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Csmd3Q80T79 Gm30684-201ENSMUST00000205632 600 ntTSL 3 BASIC11.29□□□□□ -0.6
Csmd3Q80T79 Ftl1-ps1-202ENSMUST00000222435 938 ntAPPRIS P1 BASIC11.29□□□□□ -0.6
Csmd3Q80T79 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Csmd3Q80T79 Gm14268-201ENSMUST00000132465 682 ntTSL 3 BASIC11.29□□□□□ -0.6
Csmd3Q80T79 Gm34030-202ENSMUST00000211434 1126 ntTSL 5 BASIC11.29□□□□□ -0.6
Csmd3Q80T79 Aqp12-201ENSMUST00000059676 1088 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Csmd3Q80T79 Hexb-201ENSMUST00000022169 1905 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Csmd3Q80T79 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Csmd3Q80T79 Gm11025-201ENSMUST00000140773 466 ntBASIC11.29□□□□□ -0.6
Csmd3Q80T79 Runx2os2-201ENSMUST00000161664 818 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Csmd3Q80T79 Zfp511-201ENSMUST00000168194 1076 ntAPPRIS P1 TSL 2 BASIC11.29□□□□□ -0.6
Csmd3Q80T79 5830454E08Rik-202ENSMUST00000213974 744 ntBASIC11.29□□□□□ -0.6
Csmd3Q80T79 AC154757.1-201ENSMUST00000228289 336 ntBASIC11.29□□□□□ -0.6
Csmd3Q80T79 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Csmd3Q80T79 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Csmd3Q80T79 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Csmd3Q80T79 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
Csmd3Q80T79 Trnt1-203ENSMUST00000113248 1398 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Csmd3Q80T79 Gm37500-201ENSMUST00000192059 1443 ntBASIC11.28□□□□□ -0.6
Csmd3Q80T79 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
Csmd3Q80T79 Gm44492-201ENSMUST00000197012 141 ntBASIC11.28□□□□□ -0.6
Csmd3Q80T79 Krtap19-4-201ENSMUST00000051103 304 ntAPPRIS P1 BASIC11.28□□□□□ -0.6
Csmd3Q80T79 Pitx2-206ENSMUST00000174623 1493 ntTSL 2 BASIC11.28□□□□□ -0.6
Csmd3Q80T79 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
Csmd3Q80T79 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Csmd3Q80T79 Ager-209ENSMUST00000174496 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Csmd3Q80T79 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC11.28□□□□□ -0.6
Csmd3Q80T79 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Csmd3Q80T79 Fam103a1-202ENSMUST00000118190 1391 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Csmd3Q80T79 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Csmd3Q80T79 Bhlhe41-202ENSMUST00000111703 744 ntTSL 3 BASIC11.28□□□□□ -0.6
Csmd3Q80T79 Vamp2-202ENSMUST00000117780 1113 ntTSL 2 BASIC11.28□□□□□ -0.6
Csmd3Q80T79 9530003J23Rik-202ENSMUST00000159193 1033 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 23.4 ms