Protein–RNA interactions for Protein: Q6PHS6

Snx13, Sorting nexin-13, mousemouse

Predictions only

Length 957 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snx13Q6PHS6 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC18.8■□□□□ 0.6
Snx13Q6PHS6 Pcmt1-208ENSMUST00000162606 2757 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Snx13Q6PHS6 Ptpa-201ENSMUST00000042055 2586 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Snx13Q6PHS6 Gm13158-201ENSMUST00000122007 736 ntBASIC18.8■□□□□ 0.6
Snx13Q6PHS6 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC18.8■□□□□ 0.6
Snx13Q6PHS6 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
Snx13Q6PHS6 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Snx13Q6PHS6 Psmd12-203ENSMUST00000106752 1955 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Snx13Q6PHS6 Fmnl3-201ENSMUST00000081224 4137 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Snx13Q6PHS6 H2-Q4-201ENSMUST00000081435 1793 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Snx13Q6PHS6 Hist1h2ac-201ENSMUST00000171127 2482 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
Snx13Q6PHS6 Nsmaf-201ENSMUST00000029910 3507 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Snx13Q6PHS6 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC18.8■□□□□ 0.6
Snx13Q6PHS6 Gpc5-202ENSMUST00000175665 2187 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Snx13Q6PHS6 Wdr91-201ENSMUST00000081214 2682 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Snx13Q6PHS6 Gdf5-201ENSMUST00000040162 2320 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Snx13Q6PHS6 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Snx13Q6PHS6 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
Snx13Q6PHS6 Fzd10-201ENSMUST00000117102 3250 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
Snx13Q6PHS6 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC18.79■□□□□ 0.6
Snx13Q6PHS6 Papd4-205ENSMUST00000225868 3081 ntAPPRIS ALT1 BASIC18.79■□□□□ 0.6
Snx13Q6PHS6 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC18.79■□□□□ 0.6
Snx13Q6PHS6 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC18.79■□□□□ 0.6
Snx13Q6PHS6 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
Snx13Q6PHS6 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Snx13Q6PHS6 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Snx13Q6PHS6 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Snx13Q6PHS6 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Snx13Q6PHS6 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC18.79■□□□□ 0.6
Snx13Q6PHS6 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Snx13Q6PHS6 Pbx4-201ENSMUST00000081503 1560 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
Snx13Q6PHS6 Sirt6-201ENSMUST00000042923 1891 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
Snx13Q6PHS6 March8-201ENSMUST00000079012 4450 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Snx13Q6PHS6 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
Snx13Q6PHS6 Trpv4-203ENSMUST00000112219 2295 ntTSL 5 BASIC18.79■□□□□ 0.6
Snx13Q6PHS6 Rnpep-202ENSMUST00000077340 2288 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Snx13Q6PHS6 Chpf-201ENSMUST00000079205 2892 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Snx13Q6PHS6 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Snx13Q6PHS6 Tbrg4-212ENSMUST00000189268 2347 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Snx13Q6PHS6 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Snx13Q6PHS6 Patz1-205ENSMUST00000110043 3702 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
Snx13Q6PHS6 4931440P22Rik-202ENSMUST00000147424 2430 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Snx13Q6PHS6 Ankrd10-201ENSMUST00000033905 2285 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Snx13Q6PHS6 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC18.78■□□□□ 0.6
Snx13Q6PHS6 Gm17661-201ENSMUST00000170317 270 ntBASIC18.78■□□□□ 0.6
Snx13Q6PHS6 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Snx13Q6PHS6 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
Snx13Q6PHS6 Anp32a-201ENSMUST00000085519 2113 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Snx13Q6PHS6 Papolb-201ENSMUST00000099400 4239 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
Snx13Q6PHS6 Gm45203-201ENSMUST00000206384 1831 ntBASIC18.78■□□□□ 0.6
Snx13Q6PHS6 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Snx13Q6PHS6 Bend6-204ENSMUST00000129464 1750 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Snx13Q6PHS6 Stox2-208ENSMUST00000211737 4573 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Snx13Q6PHS6 Exoc8-201ENSMUST00000098312 4598 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
Snx13Q6PHS6 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
Snx13Q6PHS6 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Snx13Q6PHS6 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Snx13Q6PHS6 Slc8a3-202ENSMUST00000085238 4927 ntAPPRIS ALT1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Snx13Q6PHS6 Tmem229b-201ENSMUST00000056660 3860 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Snx13Q6PHS6 Mesp2-201ENSMUST00000107394 1944 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Snx13Q6PHS6 Gm12382-201ENSMUST00000122005 922 ntBASIC18.77■□□□□ 0.6
Snx13Q6PHS6 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC18.77■□□□□ 0.6
Snx13Q6PHS6 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC18.77■□□□□ 0.6
Snx13Q6PHS6 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Snx13Q6PHS6 Cdh2-201ENSMUST00000025166 4843 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Snx13Q6PHS6 Ifitm10-201ENSMUST00000059223 3412 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Snx13Q6PHS6 Apba3-211ENSMUST00000220297 2268 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
Snx13Q6PHS6 Smarcc1-204ENSMUST00000197984 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Snx13Q6PHS6 Atxn7l2-203ENSMUST00000117784 2387 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Snx13Q6PHS6 Simc1-202ENSMUST00000121401 4819 ntAPPRIS P2 TSL 5 BASIC18.77■□□□□ 0.59
Snx13Q6PHS6 Trmt2a-202ENSMUST00000100099 2235 ntAPPRIS P5 TSL 1 (best) BASIC18.77■□□□□ 0.59
Snx13Q6PHS6 Pnpo-201ENSMUST00000018803 1994 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Snx13Q6PHS6 Myo5b-201ENSMUST00000074157 6745 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.59
Snx13Q6PHS6 Pi4k2a-201ENSMUST00000066778 3771 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Snx13Q6PHS6 AC115863.1-201ENSMUST00000214815 1813 ntBASIC18.77■□□□□ 0.59
Snx13Q6PHS6 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC18.76■□□□□ 0.59
Snx13Q6PHS6 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Snx13Q6PHS6 Gm17200-201ENSMUST00000170214 2022 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Snx13Q6PHS6 Wee1-201ENSMUST00000033326 3419 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Snx13Q6PHS6 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Snx13Q6PHS6 Dmpk-203ENSMUST00000108474 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Snx13Q6PHS6 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Snx13Q6PHS6 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Snx13Q6PHS6 Gm27000-201ENSMUST00000182943 842 ntBASIC18.76■□□□□ 0.59
Snx13Q6PHS6 Gm9694-201ENSMUST00000193347 1189 ntBASIC18.76■□□□□ 0.59
Snx13Q6PHS6 Stxbp3-201ENSMUST00000102621 2419 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Snx13Q6PHS6 Prmt2-202ENSMUST00000099571 2052 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
Snx13Q6PHS6 Trim7-202ENSMUST00000109213 2356 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Snx13Q6PHS6 Fhl1-201ENSMUST00000023854 2356 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Snx13Q6PHS6 Mvp-202ENSMUST00000165096 2837 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Snx13Q6PHS6 Gk5-201ENSMUST00000085217 2815 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Snx13Q6PHS6 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Snx13Q6PHS6 Tcta-201ENSMUST00000044725 1668 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Snx13Q6PHS6 Asic4-202ENSMUST00000113577 2667 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
Snx13Q6PHS6 Spock3-204ENSMUST00000119068 3201 ntAPPRIS P3 TSL 5 BASIC18.76■□□□□ 0.59
Snx13Q6PHS6 Zfp786-201ENSMUST00000058844 3191 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Snx13Q6PHS6 Taf5-201ENSMUST00000026027 3258 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Snx13Q6PHS6 Nmt2-203ENSMUST00000102989 2162 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
Snx13Q6PHS6 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Snx13Q6PHS6 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 37.5 ms