Protein–RNA interactions for Protein: Q6PDX6

Rnf220, E3 ubiquitin-protein ligase Rnf220, mousemouse

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf220Q6PDX6 A430034D21Rik-201ENSMUST00000194339 1802 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Rnf220Q6PDX6 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Rnf220Q6PDX6 Foxl2-201ENSMUST00000051312 3256 ntAPPRIS P1 BASIC15.78■□□□□ 0.12
Rnf220Q6PDX6 Ankrd44-201ENSMUST00000044359 6192 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.12
Rnf220Q6PDX6 Socs4-201ENSMUST00000065562 6877 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Rnf220Q6PDX6 Cdhr5-201ENSMUST00000080654 2133 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.12
Rnf220Q6PDX6 Wasf2-201ENSMUST00000084241 5642 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Rnf220Q6PDX6 Ocln-205ENSMUST00000160859 2443 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Rnf220Q6PDX6 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC15.77■□□□□ 0.12
Rnf220Q6PDX6 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Rnf220Q6PDX6 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Rnf220Q6PDX6 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Rnf220Q6PDX6 Gm13509-201ENSMUST00000119733 1308 ntBASIC15.77■□□□□ 0.12
Rnf220Q6PDX6 Stk40-202ENSMUST00000116286 3860 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Rnf220Q6PDX6 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.12
Rnf220Q6PDX6 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC15.77■□□□□ 0.12
Rnf220Q6PDX6 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Rnf220Q6PDX6 Rfx5-202ENSMUST00000107253 4367 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
Rnf220Q6PDX6 Dab2ip-202ENSMUST00000091010 6455 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.11
Rnf220Q6PDX6 Taf15-201ENSMUST00000021018 2068 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Rnf220Q6PDX6 Zdhhc1-203ENSMUST00000212303 2056 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Rnf220Q6PDX6 Arhgap44-201ENSMUST00000047463 4074 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.11
Rnf220Q6PDX6 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
Rnf220Q6PDX6 BC024978-204ENSMUST00000179391 1748 ntAPPRIS P3 TSL 5 BASIC15.77■□□□□ 0.11
Rnf220Q6PDX6 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.11
Rnf220Q6PDX6 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.11
Rnf220Q6PDX6 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Rnf220Q6PDX6 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
Rnf220Q6PDX6 Rps6kb2-201ENSMUST00000025749 1864 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Rnf220Q6PDX6 Adgrl1-201ENSMUST00000045393 5643 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
Rnf220Q6PDX6 Ppm1e-201ENSMUST00000055438 6344 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Rnf220Q6PDX6 Gm11620-201ENSMUST00000118770 1845 ntBASIC15.76■□□□□ 0.11
Rnf220Q6PDX6 Arhgef11-201ENSMUST00000039476 6776 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Rnf220Q6PDX6 Tox3-201ENSMUST00000109621 3356 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Rnf220Q6PDX6 Pdzd4-202ENSMUST00000114438 3625 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Rnf220Q6PDX6 Zkscan3-208ENSMUST00000224820 5398 ntBASIC15.76■□□□□ 0.11
Rnf220Q6PDX6 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC15.76■□□□□ 0.11
Rnf220Q6PDX6 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Rnf220Q6PDX6 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Rnf220Q6PDX6 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC15.76■□□□□ 0.11
Rnf220Q6PDX6 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Rnf220Q6PDX6 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC15.76■□□□□ 0.11
Rnf220Q6PDX6 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Rnf220Q6PDX6 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC15.76■□□□□ 0.11
Rnf220Q6PDX6 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
Rnf220Q6PDX6 Prob1-201ENSMUST00000097619 3021 ntBASIC15.76■□□□□ 0.11
Rnf220Q6PDX6 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Rnf220Q6PDX6 Gm44616-201ENSMUST00000206417 1732 ntBASIC15.76■□□□□ 0.11
Rnf220Q6PDX6 Arf2-202ENSMUST00000063347 2660 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Rnf220Q6PDX6 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Rnf220Q6PDX6 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Rnf220Q6PDX6 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Rnf220Q6PDX6 Retreg3-202ENSMUST00000107295 3179 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Rnf220Q6PDX6 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Rnf220Q6PDX6 Sucla2-203ENSMUST00000160507 2229 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Rnf220Q6PDX6 Asap2-201ENSMUST00000050990 3345 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
Rnf220Q6PDX6 Tatdn2-202ENSMUST00000113022 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Rnf220Q6PDX6 Slc41a3-202ENSMUST00000044019 2412 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Rnf220Q6PDX6 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
Rnf220Q6PDX6 Serf2-204ENSMUST00000139253 3056 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Rnf220Q6PDX6 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Rnf220Q6PDX6 Smox-208ENSMUST00000110188 1991 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Rnf220Q6PDX6 Fut7-203ENSMUST00000114278 1990 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
Rnf220Q6PDX6 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Rnf220Q6PDX6 Fut7-201ENSMUST00000041654 1970 ntAPPRIS P3 TSL 5 BASIC15.75■□□□□ 0.11
Rnf220Q6PDX6 Gm10584-201ENSMUST00000207036 2628 ntBASIC15.75■□□□□ 0.11
Rnf220Q6PDX6 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Rnf220Q6PDX6 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Rnf220Q6PDX6 Gm10849-201ENSMUST00000100397 618 ntBASIC15.75■□□□□ 0.11
Rnf220Q6PDX6 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC15.75■□□□□ 0.11
Rnf220Q6PDX6 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC15.75■□□□□ 0.11
Rnf220Q6PDX6 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Rnf220Q6PDX6 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC15.75■□□□□ 0.11
Rnf220Q6PDX6 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Rnf220Q6PDX6 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Rnf220Q6PDX6 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC15.75■□□□□ 0.11
Rnf220Q6PDX6 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Rnf220Q6PDX6 Ankrd44-210ENSMUST00000179030 6140 ntAPPRIS P2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Rnf220Q6PDX6 Dnajb11-204ENSMUST00000166487 2534 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Rnf220Q6PDX6 Sox21-201ENSMUST00000170662 3799 ntAPPRIS P1 BASIC15.75■□□□□ 0.11
Rnf220Q6PDX6 Spdya-204ENSMUST00000167641 1891 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
Rnf220Q6PDX6 Map3k6-201ENSMUST00000030677 4334 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Rnf220Q6PDX6 Ptgs1-201ENSMUST00000062069 2867 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Rnf220Q6PDX6 Gjd2-201ENSMUST00000090275 2879 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Rnf220Q6PDX6 Rbfox3-201ENSMUST00000017576 3150 ntAPPRIS P4 TSL 1 (best) BASIC15.75■□□□□ 0.11
Rnf220Q6PDX6 Zbp1-201ENSMUST00000029018 1989 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Rnf220Q6PDX6 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Rnf220Q6PDX6 AC125311.2-201ENSMUST00000227477 1940 ntBASIC15.74■□□□□ 0.11
Rnf220Q6PDX6 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Rnf220Q6PDX6 Nelfa-201ENSMUST00000030993 2580 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Rnf220Q6PDX6 Dhfr-201ENSMUST00000022218 5347 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Rnf220Q6PDX6 Elf2-202ENSMUST00000091144 2366 ntTSL 5 BASIC15.74■□□□□ 0.11
Rnf220Q6PDX6 Mcidas-201ENSMUST00000092089 2377 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Rnf220Q6PDX6 Gm7290-201ENSMUST00000104990 617 ntBASIC15.74■□□□□ 0.11
Rnf220Q6PDX6 Gm12918-201ENSMUST00000120234 636 ntBASIC15.74■□□□□ 0.11
Rnf220Q6PDX6 Gm15710-201ENSMUST00000121821 636 ntBASIC15.74■□□□□ 0.11
Rnf220Q6PDX6 Gm5075-201ENSMUST00000196916 622 ntBASIC15.74■□□□□ 0.11
Rnf220Q6PDX6 AC140264.2-202ENSMUST00000218746 817 ntBASIC15.74■□□□□ 0.11
Rnf220Q6PDX6 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Rnf220Q6PDX6 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC15.74■□□□□ 0.11
Retrieved 100 of 76,532 protein–RNA pairs in 31.2 ms