Protein–RNA interactions for Protein: Q6PDG5

Smarcc2, SWI/SNF complex subunit SMARCC2, mousemouse

Predictions only

Length 1,213 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcc2Q6PDG5 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Smarcc2Q6PDG5 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Smarcc2Q6PDG5 Atp5a1-201ENSMUST00000026495 2471 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Smarcc2Q6PDG5 Gm10435-202ENSMUST00000162526 2878 ntTSL 5 BASIC19.35■□□□□ 0.69
Smarcc2Q6PDG5 Fancg-201ENSMUST00000030165 2771 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Smarcc2Q6PDG5 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
Smarcc2Q6PDG5 Bicdl1-201ENSMUST00000055408 3026 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Smarcc2Q6PDG5 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Smarcc2Q6PDG5 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
Smarcc2Q6PDG5 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Smarcc2Q6PDG5 Csnk1e-201ENSMUST00000117786 2694 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Smarcc2Q6PDG5 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Smarcc2Q6PDG5 Evx1-201ENSMUST00000031787 2877 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Smarcc2Q6PDG5 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Smarcc2Q6PDG5 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC19.34■□□□□ 0.69
Smarcc2Q6PDG5 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC19.34■□□□□ 0.69
Smarcc2Q6PDG5 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC19.34■□□□□ 0.69
Smarcc2Q6PDG5 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Smarcc2Q6PDG5 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC19.34■□□□□ 0.69
Smarcc2Q6PDG5 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Smarcc2Q6PDG5 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC19.34■□□□□ 0.69
Smarcc2Q6PDG5 Pbx4-201ENSMUST00000081503 1560 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
Smarcc2Q6PDG5 Nmt2-203ENSMUST00000102989 2162 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
Smarcc2Q6PDG5 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Smarcc2Q6PDG5 Pdk3-201ENSMUST00000045748 2115 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Smarcc2Q6PDG5 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Smarcc2Q6PDG5 Ankrd63-201ENSMUST00000104937 4861 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
Smarcc2Q6PDG5 Actr3-202ENSMUST00000178474 2565 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Smarcc2Q6PDG5 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Smarcc2Q6PDG5 Sphk1-202ENSMUST00000063446 2527 ntAPPRIS ALT2 TSL 2 BASIC19.33■□□□□ 0.69
Smarcc2Q6PDG5 Nfe2-208ENSMUST00000149111 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Smarcc2Q6PDG5 Gm26663-201ENSMUST00000181105 1882 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
Smarcc2Q6PDG5 Zpbp2-202ENSMUST00000081033 1300 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
Smarcc2Q6PDG5 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
Smarcc2Q6PDG5 Pi4kb-202ENSMUST00000107251 2895 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
Smarcc2Q6PDG5 Kcnq2-201ENSMUST00000016491 3067 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
Smarcc2Q6PDG5 Marveld1-201ENSMUST00000061111 3066 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Smarcc2Q6PDG5 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC19.33■□□□□ 0.68
Smarcc2Q6PDG5 Gm27389-201ENSMUST00000183622 195 ntBASIC19.33■□□□□ 0.68
Smarcc2Q6PDG5 Tmem57-201ENSMUST00000030628 3826 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Smarcc2Q6PDG5 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Smarcc2Q6PDG5 Olfr317-201ENSMUST00000075607 1128 ntAPPRIS P1 BASIC19.33■□□□□ 0.68
Smarcc2Q6PDG5 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC19.33■□□□□ 0.68
Smarcc2Q6PDG5 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC19.33■□□□□ 0.68
Smarcc2Q6PDG5 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Smarcc2Q6PDG5 Fiz1-201ENSMUST00000077385 2546 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Smarcc2Q6PDG5 Nudt4-201ENSMUST00000020217 3210 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Smarcc2Q6PDG5 Lad1-201ENSMUST00000038760 2993 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Smarcc2Q6PDG5 Wrb-201ENSMUST00000023913 2495 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Smarcc2Q6PDG5 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Smarcc2Q6PDG5 Mzf1-202ENSMUST00000182087 2197 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Smarcc2Q6PDG5 Sphk1-206ENSMUST00000106388 1891 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.68
Smarcc2Q6PDG5 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC19.33■□□□□ 0.68
Smarcc2Q6PDG5 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
Smarcc2Q6PDG5 Carmil2-201ENSMUST00000062574 2526 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Smarcc2Q6PDG5 Gm6190-201ENSMUST00000220683 1374 ntBASIC19.32■□□□□ 0.68
Smarcc2Q6PDG5 Dusp4-201ENSMUST00000033930 2740 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Smarcc2Q6PDG5 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Smarcc2Q6PDG5 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Smarcc2Q6PDG5 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Smarcc2Q6PDG5 Igfbp2-201ENSMUST00000047328 1307 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Smarcc2Q6PDG5 Fbxl19-204ENSMUST00000188580 2601 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Smarcc2Q6PDG5 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Smarcc2Q6PDG5 Agpat1-201ENSMUST00000037489 2190 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Smarcc2Q6PDG5 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Smarcc2Q6PDG5 Crebl2-201ENSMUST00000046303 3629 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Smarcc2Q6PDG5 Gpha2-202ENSMUST00000113526 762 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
Smarcc2Q6PDG5 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Smarcc2Q6PDG5 Gm23634-201ENSMUST00000175071 91 ntBASIC19.32■□□□□ 0.68
Smarcc2Q6PDG5 Bcl7c-205ENSMUST00000205977 891 ntTSL 2 BASIC19.32■□□□□ 0.68
Smarcc2Q6PDG5 Gpha2-201ENSMUST00000025698 609 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Smarcc2Q6PDG5 A230103J11Rik-202ENSMUST00000156084 2086 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Smarcc2Q6PDG5 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Smarcc2Q6PDG5 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Smarcc2Q6PDG5 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Smarcc2Q6PDG5 Fscn1-207ENSMUST00000198017 2157 ntTSL 5 BASIC19.32■□□□□ 0.68
Smarcc2Q6PDG5 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Smarcc2Q6PDG5 Ptpn5-201ENSMUST00000033142 3145 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Smarcc2Q6PDG5 Ebf1-203ENSMUST00000109268 2864 ntAPPRIS ALT1 TSL 5 BASIC19.31■□□□□ 0.68
Smarcc2Q6PDG5 Eml2-201ENSMUST00000048502 2275 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
Smarcc2Q6PDG5 Tmem214-201ENSMUST00000114716 2220 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
Smarcc2Q6PDG5 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Smarcc2Q6PDG5 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
Smarcc2Q6PDG5 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
Smarcc2Q6PDG5 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC19.31■□□□□ 0.68
Smarcc2Q6PDG5 Aga-203ENSMUST00000211424 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Smarcc2Q6PDG5 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Smarcc2Q6PDG5 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Smarcc2Q6PDG5 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Smarcc2Q6PDG5 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
Smarcc2Q6PDG5 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Smarcc2Q6PDG5 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Smarcc2Q6PDG5 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
Smarcc2Q6PDG5 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Smarcc2Q6PDG5 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
Smarcc2Q6PDG5 Asic2-201ENSMUST00000021045 3436 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Smarcc2Q6PDG5 A830073O21Rik-202ENSMUST00000205693 3096 ntBASIC19.31■□□□□ 0.68
Smarcc2Q6PDG5 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Smarcc2Q6PDG5 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Smarcc2Q6PDG5 Cul1-201ENSMUST00000031697 3161 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 91.3 ms