Protein–RNA interactions for Protein: Q6NZM9

Hdac4, Histone deacetylase 4, mousemouse

Predictions only

Length 1,076 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hdac4Q6NZM9 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC18.57■□□□□ 0.56
Hdac4Q6NZM9 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC18.57■□□□□ 0.56
Hdac4Q6NZM9 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Hdac4Q6NZM9 Gm26039-201ENSMUST00000158152 144 ntBASIC18.57■□□□□ 0.56
Hdac4Q6NZM9 Rpl14-201ENSMUST00000165532 1009 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Hdac4Q6NZM9 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Hdac4Q6NZM9 Gm18421-201ENSMUST00000204122 625 ntBASIC18.57■□□□□ 0.56
Hdac4Q6NZM9 Bcl7c-205ENSMUST00000205977 891 ntTSL 2 BASIC18.57■□□□□ 0.56
Hdac4Q6NZM9 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC18.57■□□□□ 0.56
Hdac4Q6NZM9 Lad1-201ENSMUST00000038760 2993 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Hdac4Q6NZM9 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Hdac4Q6NZM9 Pdk3-201ENSMUST00000045748 2115 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Hdac4Q6NZM9 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Hdac4Q6NZM9 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Hdac4Q6NZM9 Gm20628-201ENSMUST00000177363 3215 ntBASIC18.57■□□□□ 0.56
Hdac4Q6NZM9 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
Hdac4Q6NZM9 Stk35-202ENSMUST00000166282 5445 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Hdac4Q6NZM9 Il9r-204ENSMUST00000142396 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Hdac4Q6NZM9 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Hdac4Q6NZM9 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Hdac4Q6NZM9 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Hdac4Q6NZM9 Adat2-201ENSMUST00000019944 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Hdac4Q6NZM9 Mal-202ENSMUST00000028854 2778 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Hdac4Q6NZM9 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Hdac4Q6NZM9 Ebf1-203ENSMUST00000109268 2864 ntAPPRIS ALT1 TSL 5 BASIC18.56■□□□□ 0.56
Hdac4Q6NZM9 Evx1-201ENSMUST00000031787 2877 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Hdac4Q6NZM9 Ptpn5-201ENSMUST00000033142 3145 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Hdac4Q6NZM9 Gm20517-202ENSMUST00000132397 4807 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Hdac4Q6NZM9 Gm16867-201ENSMUST00000179116 3084 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Hdac4Q6NZM9 Fancg-201ENSMUST00000030165 2771 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Hdac4Q6NZM9 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Hdac4Q6NZM9 Gm11336-201ENSMUST00000118168 334 ntBASIC18.56■□□□□ 0.56
Hdac4Q6NZM9 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Hdac4Q6NZM9 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
Hdac4Q6NZM9 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC18.56■□□□□ 0.56
Hdac4Q6NZM9 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Hdac4Q6NZM9 Tmem35b-201ENSMUST00000094712 1120 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Hdac4Q6NZM9 Cspp1-203ENSMUST00000118263 2162 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Hdac4Q6NZM9 Fscn1-207ENSMUST00000198017 2157 ntTSL 5 BASIC18.56■□□□□ 0.56
Hdac4Q6NZM9 Gm14317-201ENSMUST00000151754 1464 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Hdac4Q6NZM9 Sphk1-206ENSMUST00000106388 1891 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
Hdac4Q6NZM9 Madcam1-201ENSMUST00000020554 1436 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Hdac4Q6NZM9 Ube2e1-201ENSMUST00000022296 1408 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Hdac4Q6NZM9 Ifrd2-201ENSMUST00000010192 2056 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Hdac4Q6NZM9 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
Hdac4Q6NZM9 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
Hdac4Q6NZM9 Capn10-201ENSMUST00000027488 2902 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Hdac4Q6NZM9 Gm45412-201ENSMUST00000210217 2275 ntBASIC18.55■□□□□ 0.56
Hdac4Q6NZM9 Gtf2h4-201ENSMUST00000001565 1679 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Hdac4Q6NZM9 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC18.55■□□□□ 0.56
Hdac4Q6NZM9 AC134329.2-201ENSMUST00000217897 428 ntBASIC18.55■□□□□ 0.56
Hdac4Q6NZM9 AC159205.3-201ENSMUST00000224614 874 ntBASIC18.55■□□□□ 0.56
Hdac4Q6NZM9 Mrpl14-201ENSMUST00000024734 645 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Hdac4Q6NZM9 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Hdac4Q6NZM9 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Hdac4Q6NZM9 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC18.55■□□□□ 0.56
Hdac4Q6NZM9 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC18.55■□□□□ 0.56
Hdac4Q6NZM9 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
Hdac4Q6NZM9 Rad51d-203ENSMUST00000092844 1228 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Hdac4Q6NZM9 Tmem214-201ENSMUST00000114716 2220 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
Hdac4Q6NZM9 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Hdac4Q6NZM9 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
Hdac4Q6NZM9 Scrt1-202ENSMUST00000164703 3478 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
Hdac4Q6NZM9 Cygb-201ENSMUST00000021166 2331 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Hdac4Q6NZM9 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Hdac4Q6NZM9 9530018F02Rik-201ENSMUST00000219513 2599 ntBASIC18.54■□□□□ 0.56
Hdac4Q6NZM9 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Hdac4Q6NZM9 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Hdac4Q6NZM9 G3bp2-204ENSMUST00000169094 2716 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
Hdac4Q6NZM9 Sphk1-202ENSMUST00000063446 2527 ntAPPRIS ALT2 TSL 2 BASIC18.54■□□□□ 0.56
Hdac4Q6NZM9 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Hdac4Q6NZM9 Gm26892-201ENSMUST00000181695 1636 ntTSL 5 BASIC18.54■□□□□ 0.56
Hdac4Q6NZM9 Nadk2-203ENSMUST00000100790 3665 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
Hdac4Q6NZM9 Spata25-201ENSMUST00000017911 786 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Hdac4Q6NZM9 Krtap5-1-202ENSMUST00000188274 742 ntBASIC18.54■□□□□ 0.56
Hdac4Q6NZM9 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC18.54■□□□□ 0.56
Hdac4Q6NZM9 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC18.54■□□□□ 0.56
Hdac4Q6NZM9 Nme3-201ENSMUST00000024978 715 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Hdac4Q6NZM9 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Hdac4Q6NZM9 Adss-201ENSMUST00000016105 2771 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Hdac4Q6NZM9 Krt6b-201ENSMUST00000023786 2226 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Hdac4Q6NZM9 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Hdac4Q6NZM9 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Hdac4Q6NZM9 Ifnar1-202ENSMUST00000117748 2771 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Hdac4Q6NZM9 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Hdac4Q6NZM9 Eml2-201ENSMUST00000048502 2275 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
Hdac4Q6NZM9 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Hdac4Q6NZM9 Urah-202ENSMUST00000106050 719 ntAPPRIS ALT2 TSL 2 BASIC18.53■□□□□ 0.56
Hdac4Q6NZM9 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Hdac4Q6NZM9 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC18.53■□□□□ 0.56
Hdac4Q6NZM9 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Hdac4Q6NZM9 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
Hdac4Q6NZM9 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC18.53■□□□□ 0.56
Hdac4Q6NZM9 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Hdac4Q6NZM9 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
Hdac4Q6NZM9 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Hdac4Q6NZM9 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Hdac4Q6NZM9 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Hdac4Q6NZM9 Ager-201ENSMUST00000015596 1370 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
Hdac4Q6NZM9 Raxos1-201ENSMUST00000181100 2547 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 24.9 ms