Protein–RNA interactions for Protein: Q6DD96

Pcdhga7, Protocadherin gamma subfamily A, 7, mousemouse

Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga7Q6DD96 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Pcdhga7Q6DD96 Rgs3-203ENSMUST00000098031 2072 ntAPPRIS ALT1 TSL 5 BASIC16.1■□□□□ 0.17
Pcdhga7Q6DD96 Carmil2-201ENSMUST00000062574 2526 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Pcdhga7Q6DD96 Akt2-214ENSMUST00000167435 2865 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Pcdhga7Q6DD96 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Pcdhga7Q6DD96 Gpr37l1-201ENSMUST00000027682 2269 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Pcdhga7Q6DD96 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
Pcdhga7Q6DD96 Flvcr1-201ENSMUST00000085635 4040 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Pcdhga7Q6DD96 Kat2a-202ENSMUST00000103118 3046 ntAPPRIS P4 TSL 1 (best) BASIC16.1■□□□□ 0.17
Pcdhga7Q6DD96 Kat2a-201ENSMUST00000006973 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Pcdhga7Q6DD96 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Pcdhga7Q6DD96 Gm13181-201ENSMUST00000120117 1069 ntBASIC16.1■□□□□ 0.17
Pcdhga7Q6DD96 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Pcdhga7Q6DD96 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC16.1■□□□□ 0.17
Pcdhga7Q6DD96 Otx2os1-204ENSMUST00000227221 751 ntBASIC16.1■□□□□ 0.17
Pcdhga7Q6DD96 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Pcdhga7Q6DD96 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Pcdhga7Q6DD96 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Pcdhga7Q6DD96 Yipf4-201ENSMUST00000024873 2133 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Pcdhga7Q6DD96 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Pcdhga7Q6DD96 Crtac1-201ENSMUST00000048630 2616 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Pcdhga7Q6DD96 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
Pcdhga7Q6DD96 Hnrnpll-201ENSMUST00000061331 3116 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
Pcdhga7Q6DD96 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Pcdhga7Q6DD96 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC16.09■□□□□ 0.17
Pcdhga7Q6DD96 Elf2-202ENSMUST00000091144 2366 ntTSL 5 BASIC16.09■□□□□ 0.17
Pcdhga7Q6DD96 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Pcdhga7Q6DD96 Wrb-201ENSMUST00000023913 2495 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Pcdhga7Q6DD96 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Pcdhga7Q6DD96 Tmem132c-201ENSMUST00000119026 5134 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Pcdhga7Q6DD96 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
Pcdhga7Q6DD96 Tmem267-205ENSMUST00000223912 1789 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
Pcdhga7Q6DD96 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Pcdhga7Q6DD96 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Pcdhga7Q6DD96 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC16.09■□□□□ 0.17
Pcdhga7Q6DD96 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Pcdhga7Q6DD96 Gtpbp3-201ENSMUST00000007754 2800 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Pcdhga7Q6DD96 Pex12-205ENSMUST00000175741 2337 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Pcdhga7Q6DD96 Synpo-205ENSMUST00000130044 4970 ntAPPRIS P3 TSL 2 BASIC16.09■□□□□ 0.17
Pcdhga7Q6DD96 Ifitm10-201ENSMUST00000059223 3412 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Pcdhga7Q6DD96 Adnp2-201ENSMUST00000066743 5012 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Pcdhga7Q6DD96 Comp-201ENSMUST00000003659 2416 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Pcdhga7Q6DD96 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Pcdhga7Q6DD96 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Pcdhga7Q6DD96 Mcoln2-202ENSMUST00000098524 2492 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Pcdhga7Q6DD96 Pqlc1-202ENSMUST00000091798 1989 ntAPPRIS P3 TSL 5 BASIC16.09■□□□□ 0.17
Pcdhga7Q6DD96 Zdhhc1-203ENSMUST00000212303 2056 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Pcdhga7Q6DD96 Ndufs2-202ENSMUST00000111318 1545 ntTSL 5 BASIC16.09■□□□□ 0.17
Pcdhga7Q6DD96 Gm45470-202ENSMUST00000210817 2192 ntTSL 5 BASIC16.09■□□□□ 0.17
Pcdhga7Q6DD96 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Pcdhga7Q6DD96 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Pcdhga7Q6DD96 Fam160a2-203ENSMUST00000118726 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Pcdhga7Q6DD96 Agk-201ENSMUST00000031977 2531 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Pcdhga7Q6DD96 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Pcdhga7Q6DD96 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Pcdhga7Q6DD96 G3bp2-204ENSMUST00000169094 2716 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
Pcdhga7Q6DD96 Pcmt1-208ENSMUST00000162606 2757 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Pcdhga7Q6DD96 Htatsf1-201ENSMUST00000088652 2810 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Pcdhga7Q6DD96 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Pcdhga7Q6DD96 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC16.08■□□□□ 0.16
Pcdhga7Q6DD96 Tmtc4-204ENSMUST00000126867 2952 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
Pcdhga7Q6DD96 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC16.08■□□□□ 0.16
Pcdhga7Q6DD96 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC16.08■□□□□ 0.16
Pcdhga7Q6DD96 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC16.08■□□□□ 0.16
Pcdhga7Q6DD96 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Pcdhga7Q6DD96 Gm8520-201ENSMUST00000186517 868 ntBASIC16.08■□□□□ 0.16
Pcdhga7Q6DD96 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC16.08■□□□□ 0.16
Pcdhga7Q6DD96 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC16.08■□□□□ 0.16
Pcdhga7Q6DD96 AC156016.1-201ENSMUST00000227190 1035 ntBASIC16.08■□□□□ 0.16
Pcdhga7Q6DD96 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Pcdhga7Q6DD96 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Pcdhga7Q6DD96 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Pcdhga7Q6DD96 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Pcdhga7Q6DD96 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Pcdhga7Q6DD96 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Pcdhga7Q6DD96 Letm2-208ENSMUST00000210616 2974 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Pcdhga7Q6DD96 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Pcdhga7Q6DD96 Papd4-205ENSMUST00000225868 3081 ntAPPRIS ALT1 BASIC16.08■□□□□ 0.16
Pcdhga7Q6DD96 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Pcdhga7Q6DD96 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Pcdhga7Q6DD96 Gdf5-201ENSMUST00000040162 2320 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Pcdhga7Q6DD96 Atp5a1-201ENSMUST00000026495 2471 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Pcdhga7Q6DD96 Ddx50-201ENSMUST00000020270 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Pcdhga7Q6DD96 Adam15-202ENSMUST00000074582 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Pcdhga7Q6DD96 Gm45212-201ENSMUST00000205831 3403 ntBASIC16.07■□□□□ 0.16
Pcdhga7Q6DD96 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Pcdhga7Q6DD96 Gm715-201ENSMUST00000117865 831 ntBASIC16.07■□□□□ 0.16
Pcdhga7Q6DD96 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC16.07■□□□□ 0.16
Pcdhga7Q6DD96 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Pcdhga7Q6DD96 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Pcdhga7Q6DD96 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Pcdhga7Q6DD96 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Pcdhga7Q6DD96 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Pcdhga7Q6DD96 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Pcdhga7Q6DD96 Wnt10b-204ENSMUST00000226655 1807 ntBASIC16.07■□□□□ 0.16
Pcdhga7Q6DD96 Zfp512b-201ENSMUST00000108789 5714 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Pcdhga7Q6DD96 Iqgap2-201ENSMUST00000068603 5771 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Pcdhga7Q6DD96 Phf7-201ENSMUST00000022459 2084 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Pcdhga7Q6DD96 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Pcdhga7Q6DD96 Cops7b-201ENSMUST00000027446 2231 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 27.6 ms