Protein–RNA interactions for Protein: Q640N4

Zfp248, Zinc finger protein 248, mousemouse

Predictions only

Length 576 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Zfp248Q640N4 Shank3-201ENSMUST00000039074 7131 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Zfp248Q640N4 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Zfp248Q640N4 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC12.63□□□□□ -0.39
Zfp248Q640N4 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC12.63□□□□□ -0.39
Zfp248Q640N4 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Zfp248Q640N4 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Zfp248Q640N4 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC12.63□□□□□ -0.39
Zfp248Q640N4 Usp30-201ENSMUST00000031588 4604 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Zfp248Q640N4 Pld2-201ENSMUST00000018429 3659 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
Zfp248Q640N4 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Zfp248Q640N4 Crb2-201ENSMUST00000050372 6372 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Zfp248Q640N4 Mettl27-204ENSMUST00000111219 1790 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Zfp248Q640N4 B230219D22Rik-201ENSMUST00000057844 4652 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Zfp248Q640N4 Cobl-203ENSMUST00000109651 5541 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Zfp248Q640N4 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Zfp248Q640N4 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Zfp248Q640N4 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Zfp248Q640N4 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Zfp248Q640N4 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
Zfp248Q640N4 Ptgis-201ENSMUST00000018113 2107 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Zfp248Q640N4 Pdcl3-201ENSMUST00000027247 3914 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Zfp248Q640N4 Adnp-201ENSMUST00000057793 4917 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Zfp248Q640N4 Lats1-202ENSMUST00000165952 7209 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Zfp248Q640N4 Kcnq2-201ENSMUST00000016491 3067 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Zfp248Q640N4 Fhl1-203ENSMUST00000114769 2770 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Zfp248Q640N4 Plekha4-202ENSMUST00000209517 2577 ntAPPRIS P2 TSL 5 BASIC12.62□□□□□ -0.39
Zfp248Q640N4 Atg5-201ENSMUST00000039286 2352 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Zfp248Q640N4 Fhl2-201ENSMUST00000008280 1563 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Zfp248Q640N4 Platr31-201ENSMUST00000180653 1466 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Zfp248Q640N4 Papolb-201ENSMUST00000099400 4239 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
Zfp248Q640N4 Gm13181-201ENSMUST00000120117 1069 ntBASIC12.62□□□□□ -0.39
Zfp248Q640N4 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Zfp248Q640N4 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC12.62□□□□□ -0.39
Zfp248Q640N4 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC12.62□□□□□ -0.39
Zfp248Q640N4 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC12.62□□□□□ -0.39
Zfp248Q640N4 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Zfp248Q640N4 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC12.62□□□□□ -0.39
Zfp248Q640N4 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC12.62□□□□□ -0.39
Zfp248Q640N4 Gm7791-201ENSMUST00000219066 539 ntBASIC12.62□□□□□ -0.39
Zfp248Q640N4 Odf3b-204ENSMUST00000227834 930 ntBASIC12.62□□□□□ -0.39
Zfp248Q640N4 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Zfp248Q640N4 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC12.62□□□□□ -0.39
Zfp248Q640N4 Gm26917-202ENSMUST00000192833 3329 ntBASIC12.62□□□□□ -0.39
Zfp248Q640N4 Wasf1-202ENSMUST00000105509 2719 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Zfp248Q640N4 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Zfp248Q640N4 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Zfp248Q640N4 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Zfp248Q640N4 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Zfp248Q640N4 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Zfp248Q640N4 Ankra2-204ENSMUST00000150352 2217 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Zfp248Q640N4 Ptprt-202ENSMUST00000109442 7719 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Zfp248Q640N4 Gm26803-201ENSMUST00000181705 2011 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Zfp248Q640N4 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Zfp248Q640N4 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC12.62□□□□□ -0.39
Zfp248Q640N4 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Zfp248Q640N4 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Zfp248Q640N4 Gm37166-201ENSMUST00000195473 2474 ntBASIC12.62□□□□□ -0.39
Zfp248Q640N4 Gm18336-201ENSMUST00000180787 2298 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
Zfp248Q640N4 Ptpn5-201ENSMUST00000033142 3145 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Zfp248Q640N4 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Zfp248Q640N4 Pigz-201ENSMUST00000052174 2184 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Zfp248Q640N4 Ano8-204ENSMUST00000213382 3785 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Zfp248Q640N4 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Zfp248Q640N4 Impdh1-202ENSMUST00000159124 2600 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Zfp248Q640N4 Mcm9-201ENSMUST00000075540 4882 ntAPPRIS P1 TSL 2 BASIC12.61□□□□□ -0.39
Zfp248Q640N4 Saysd1-201ENSMUST00000059666 2315 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Zfp248Q640N4 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Zfp248Q640N4 4930448E22Rik-202ENSMUST00000215242 2102 ntTSL 5 BASIC12.61□□□□□ -0.39
Zfp248Q640N4 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Zfp248Q640N4 Rbm12b2-202ENSMUST00000095143 3147 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Zfp248Q640N4 D16Ertd472e-203ENSMUST00000114220 2453 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Zfp248Q640N4 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC12.61□□□□□ -0.39
Zfp248Q640N4 Mycs-201ENSMUST00000058404 2368 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
Zfp248Q640N4 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Zfp248Q640N4 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Zfp248Q640N4 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Zfp248Q640N4 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
Zfp248Q640N4 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Zfp248Q640N4 Slc9a6-202ENSMUST00000114784 4449 ntTSL 5 BASIC12.61□□□□□ -0.39
Zfp248Q640N4 Lad1-201ENSMUST00000038760 2993 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Zfp248Q640N4 Tll1-201ENSMUST00000066166 4767 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Zfp248Q640N4 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Zfp248Q640N4 Ppfia3-207ENSMUST00000211067 4565 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Zfp248Q640N4 Ube2i-207ENSMUST00000172868 2755 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Zfp248Q640N4 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC12.61□□□□□ -0.39
Zfp248Q640N4 Tmem5-205ENSMUST00000140299 4793 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Zfp248Q640N4 Shank1-202ENSMUST00000107935 6649 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Zfp248Q640N4 Ahctf1-201ENSMUST00000027768 8506 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Zfp248Q640N4 Sptbn4-203ENSMUST00000108363 4724 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Zfp248Q640N4 Sptbn4-204ENSMUST00000108364 4740 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Zfp248Q640N4 Evx1-201ENSMUST00000031787 2877 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Zfp248Q640N4 Irak1-201ENSMUST00000033769 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Zfp248Q640N4 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Zfp248Q640N4 Slc44a1-201ENSMUST00000102911 3102 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Zfp248Q640N4 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Zfp248Q640N4 Mis18bp1-208ENSMUST00000222244 2053 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Zfp248Q640N4 Cblb-201ENSMUST00000114471 6648 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Zfp248Q640N4 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Zfp248Q640N4 Pcsk6-201ENSMUST00000055576 4405 ntAPPRIS P3 TSL 5 BASIC12.6□□□□□ -0.39
Zfp248Q640N4 Gm715-201ENSMUST00000117865 831 ntBASIC12.6□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 35.7 ms