Protein–RNA interactions for Protein: Q62205

Scn9a, Sodium channel protein type 9 subunit alpha, mousemouse

Predictions only

Length 1,984 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn9aQ62205 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Scn9aQ62205 Gm4913-201ENSMUST00000117075 1290 ntBASIC19.47■□□□□ 0.71
Scn9aQ62205 Erp27-201ENSMUST00000032343 1029 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Scn9aQ62205 A930016O22Rik-201ENSMUST00000047020 1214 ntTSL 2 BASIC19.47■□□□□ 0.71
Scn9aQ62205 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
Scn9aQ62205 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Scn9aQ62205 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
Scn9aQ62205 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Scn9aQ62205 Phb2-201ENSMUST00000004375 1318 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
Scn9aQ62205 Fhl2-201ENSMUST00000008280 1563 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Scn9aQ62205 Gm45277-201ENSMUST00000210549 1695 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Scn9aQ62205 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Scn9aQ62205 Tcp1-207ENSMUST00000143961 614 ntTSL 2 BASIC19.46■□□□□ 0.71
Scn9aQ62205 Gm10419-203ENSMUST00000197854 653 ntTSL 5 BASIC19.46■□□□□ 0.71
Scn9aQ62205 Gm44945-201ENSMUST00000206764 1187 ntBASIC19.46■□□□□ 0.71
Scn9aQ62205 Pts-201ENSMUST00000034570 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Scn9aQ62205 Gm15500-202ENSMUST00000071641 1019 ntBASIC19.46■□□□□ 0.71
Scn9aQ62205 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Scn9aQ62205 Borcs5-201ENSMUST00000062755 1764 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Scn9aQ62205 AI661453-201ENSMUST00000037701 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Scn9aQ62205 Smox-204ENSMUST00000110181 2299 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Scn9aQ62205 Cpt2-203ENSMUST00000106720 1015 ntTSL 2 BASIC19.46■□□□□ 0.71
Scn9aQ62205 Hsf4-203ENSMUST00000172525 1276 ntTSL 5 BASIC19.46■□□□□ 0.71
Scn9aQ62205 Gm5682-201ENSMUST00000173402 505 ntBASIC19.46■□□□□ 0.71
Scn9aQ62205 Gm9172-201ENSMUST00000212092 954 ntBASIC19.46■□□□□ 0.71
Scn9aQ62205 AC159114.1-201ENSMUST00000220349 266 ntBASIC19.46■□□□□ 0.71
Scn9aQ62205 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Scn9aQ62205 Gm12689-201ENSMUST00000094955 1359 ntAPPRIS P1 BASIC19.46■□□□□ 0.7
Scn9aQ62205 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Scn9aQ62205 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Scn9aQ62205 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Scn9aQ62205 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
Scn9aQ62205 D030044L04Rik-201ENSMUST00000204220 1291 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Scn9aQ62205 AC110091.2-202ENSMUST00000216718 1148 ntTSL 5 BASIC19.45■□□□□ 0.7
Scn9aQ62205 Hacd1-201ENSMUST00000074854 926 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
Scn9aQ62205 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Scn9aQ62205 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC19.45■□□□□ 0.7
Scn9aQ62205 E330011M16Rik-201ENSMUST00000193614 1794 ntBASIC19.45■□□□□ 0.7
Scn9aQ62205 Gm43182-201ENSMUST00000199476 2528 ntBASIC19.45■□□□□ 0.7
Scn9aQ62205 Scamp3-203ENSMUST00000120697 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Scn9aQ62205 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Scn9aQ62205 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Scn9aQ62205 Gm15690-201ENSMUST00000128728 432 ntTSL 3 BASIC19.44■□□□□ 0.7
Scn9aQ62205 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC19.44■□□□□ 0.7
Scn9aQ62205 Gm25406-201ENSMUST00000157599 105 ntBASIC19.44■□□□□ 0.7
Scn9aQ62205 Fau-202ENSMUST00000178310 571 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Scn9aQ62205 Rhebl1-201ENSMUST00000024518 1185 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Scn9aQ62205 Spr-201ENSMUST00000045986 1230 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Scn9aQ62205 Lcat-201ENSMUST00000038896 1342 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Scn9aQ62205 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC19.44■□□□□ 0.7
Scn9aQ62205 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Scn9aQ62205 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Scn9aQ62205 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC19.44■□□□□ 0.7
Scn9aQ62205 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Scn9aQ62205 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Scn9aQ62205 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Scn9aQ62205 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC19.44■□□□□ 0.7
Scn9aQ62205 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Scn9aQ62205 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Scn9aQ62205 Gm11764-201ENSMUST00000120221 623 ntBASIC19.44■□□□□ 0.7
Scn9aQ62205 Batf-201ENSMUST00000040536 955 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Scn9aQ62205 Klk14-201ENSMUST00000056329 1271 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Scn9aQ62205 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
Scn9aQ62205 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Scn9aQ62205 Gm14317-201ENSMUST00000151754 1464 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Scn9aQ62205 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Scn9aQ62205 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
Scn9aQ62205 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Scn9aQ62205 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Scn9aQ62205 Siva1-202ENSMUST00000109755 333 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Scn9aQ62205 Oip5-202ENSMUST00000123818 1082 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Scn9aQ62205 Lrrc3c-201ENSMUST00000142268 902 ntAPPRIS P1 TSL 3 BASIC19.43■□□□□ 0.7
Scn9aQ62205 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Scn9aQ62205 Rhox2a-202ENSMUST00000173650 735 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Scn9aQ62205 Rhox2c-204ENSMUST00000184688 720 ntTSL 5 BASIC19.43■□□□□ 0.7
Scn9aQ62205 1110035H17Rik-202ENSMUST00000205672 1231 ntBASIC19.43■□□□□ 0.7
Scn9aQ62205 Miox-201ENSMUST00000023282 1130 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Scn9aQ62205 Acyp2-201ENSMUST00000074613 863 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Scn9aQ62205 2810039B14Rik-201ENSMUST00000183928 1459 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Scn9aQ62205 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC19.43■□□□□ 0.7
Scn9aQ62205 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
Scn9aQ62205 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Scn9aQ62205 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Scn9aQ62205 Gm7229-201ENSMUST00000214719 1007 ntBASIC19.43■□□□□ 0.7
Scn9aQ62205 AC174742.1-201ENSMUST00000218272 304 ntBASIC19.43■□□□□ 0.7
Scn9aQ62205 Csrp2-207ENSMUST00000220409 780 ntTSL 2 BASIC19.43■□□□□ 0.7
Scn9aQ62205 Ankra2-201ENSMUST00000022164 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Scn9aQ62205 9430038I01Rik-201ENSMUST00000068996 1126 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Scn9aQ62205 Sumo1-201ENSMUST00000091374 1215 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Scn9aQ62205 1700086L19Rik-201ENSMUST00000095617 706 ntBASIC19.43■□□□□ 0.7
Scn9aQ62205 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC19.42■□□□□ 0.7
Scn9aQ62205 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Scn9aQ62205 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Scn9aQ62205 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC19.42■□□□□ 0.7
Scn9aQ62205 Hexb-201ENSMUST00000022169 1905 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Scn9aQ62205 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC19.42■□□□□ 0.7
Scn9aQ62205 AC159106.1-201ENSMUST00000224421 690 ntBASIC19.42■□□□□ 0.7
Scn9aQ62205 Krtap9-3-201ENSMUST00000062683 759 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
Scn9aQ62205 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Scn9aQ62205 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Retrieved 100 of 76,532 protein–RNA pairs in 42 ms