Protein–RNA interactions for Protein: Q62147

Sspn, Sarcospan, mousemouse

Predictions only

Length 216 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SspnQ62147 Qprt-201ENSMUST00000032912 2050 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
SspnQ62147 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
SspnQ62147 Cul1-201ENSMUST00000031697 3161 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
SspnQ62147 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
SspnQ62147 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
SspnQ62147 Gm26596-201ENSMUST00000180464 2655 ntBASIC13.88□□□□□ -0.19
SspnQ62147 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
SspnQ62147 Tef-201ENSMUST00000023024 4079 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
SspnQ62147 Gm15743-202ENSMUST00000182690 1901 ntBASIC13.88□□□□□ -0.19
SspnQ62147 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
SspnQ62147 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
SspnQ62147 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
SspnQ62147 Gm38027-201ENSMUST00000192315 235 ntBASIC13.88□□□□□ -0.19
SspnQ62147 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC13.88□□□□□ -0.19
SspnQ62147 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC13.88□□□□□ -0.19
SspnQ62147 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC13.88□□□□□ -0.19
SspnQ62147 AC153881.1-201ENSMUST00000214448 284 ntBASIC13.88□□□□□ -0.19
SspnQ62147 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
SspnQ62147 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
SspnQ62147 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
SspnQ62147 Agap1-202ENSMUST00000074945 10069 ntTSL 5 BASIC13.88□□□□□ -0.19
SspnQ62147 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
SspnQ62147 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
SspnQ62147 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
SspnQ62147 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
SspnQ62147 Shroom3-203ENSMUST00000113055 6765 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
SspnQ62147 Tmx4-201ENSMUST00000038228 5488 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
SspnQ62147 Socs7-201ENSMUST00000045540 7015 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
SspnQ62147 Pspc1-202ENSMUST00000163924 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
SspnQ62147 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
SspnQ62147 Aftph-201ENSMUST00000035350 3998 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
SspnQ62147 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
SspnQ62147 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
SspnQ62147 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
SspnQ62147 Irs2-201ENSMUST00000040514 6323 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
SspnQ62147 Mettl16-201ENSMUST00000010698 2073 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
SspnQ62147 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
SspnQ62147 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
SspnQ62147 Kmt5b-208ENSMUST00000113977 6002 ntAPPRIS P3 TSL 5 BASIC13.87□□□□□ -0.19
SspnQ62147 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
SspnQ62147 Mylk2-201ENSMUST00000028970 2951 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
SspnQ62147 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
SspnQ62147 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
SspnQ62147 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
SspnQ62147 Fhl1-203ENSMUST00000114769 2770 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
SspnQ62147 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC13.87□□□□□ -0.19
SspnQ62147 Gm18958-201ENSMUST00000174258 762 ntBASIC13.87□□□□□ -0.19
SspnQ62147 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
SspnQ62147 Timm23-208ENSMUST00000226683 750 ntBASIC13.87□□□□□ -0.19
SspnQ62147 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC13.87□□□□□ -0.19
SspnQ62147 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC13.87□□□□□ -0.19
SspnQ62147 Gm10812-201ENSMUST00000099864 546 ntBASIC13.87□□□□□ -0.19
SspnQ62147 Mapk8ip3-203ENSMUST00000115229 5603 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
SspnQ62147 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
SspnQ62147 Ctage5-213ENSMUST00000176464 4434 ntTSL 5 BASIC13.87□□□□□ -0.19
SspnQ62147 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
SspnQ62147 Ephb4-201ENSMUST00000061244 4340 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
SspnQ62147 Pde8b-208ENSMUST00000162292 4235 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
SspnQ62147 Ube2i-207ENSMUST00000172868 2755 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
SspnQ62147 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
SspnQ62147 Anks1b-214ENSMUST00000182356 7561 ntTSL 5 BASIC13.86□□□□□ -0.19
SspnQ62147 Mlec-201ENSMUST00000112121 5955 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
SspnQ62147 Myh14-204ENSMUST00000207775 6499 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
SspnQ62147 Ubn1-201ENSMUST00000052449 6455 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
SspnQ62147 Nid1-201ENSMUST00000005532 6091 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
SspnQ62147 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC13.86□□□□□ -0.19
SspnQ62147 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
SspnQ62147 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
SspnQ62147 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
SspnQ62147 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
SspnQ62147 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC13.86□□□□□ -0.19
SspnQ62147 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC13.86□□□□□ -0.19
SspnQ62147 AC156016.1-201ENSMUST00000227190 1035 ntBASIC13.86□□□□□ -0.19
SspnQ62147 Hivep3-201ENSMUST00000084306 2973 ntBASIC13.86□□□□□ -0.19
SspnQ62147 Elavl3-201ENSMUST00000003501 5014 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
SspnQ62147 Usp53-201ENSMUST00000090379 6185 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
SspnQ62147 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
SspnQ62147 Fignl2-202ENSMUST00000213610 4462 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
SspnQ62147 Ace-201ENSMUST00000001963 4906 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
SspnQ62147 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC13.86□□□□□ -0.19
SspnQ62147 Arhgef2-202ENSMUST00000107510 4390 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
SspnQ62147 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
SspnQ62147 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
SspnQ62147 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
SspnQ62147 Akap8l-201ENSMUST00000050214 2075 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
SspnQ62147 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
SspnQ62147 Edem3-201ENSMUST00000059498 6327 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
SspnQ62147 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
SspnQ62147 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
SspnQ62147 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
SspnQ62147 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC13.85□□□□□ -0.19
SspnQ62147 E530011L22Rik-201ENSMUST00000181325 5282 ntBASIC13.85□□□□□ -0.19
SspnQ62147 Zfp334-201ENSMUST00000103084 8205 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
SspnQ62147 Grwd1-201ENSMUST00000107723 1898 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
SspnQ62147 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
SspnQ62147 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
SspnQ62147 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
SspnQ62147 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
SspnQ62147 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
SspnQ62147 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 37.6 ms