Protein–RNA interactions for Protein: Q61466

Smarcd1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 1, mousemouse

Known RBP Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcd1Q61466 1700025L06Rik-203ENSMUST00000211477 1623 ntTSL 5 BASIC17.28■□□□□ 0.36
Smarcd1Q61466 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Smarcd1Q61466 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Smarcd1Q61466 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Smarcd1Q61466 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Smarcd1Q61466 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Smarcd1Q61466 Zfp512b-201ENSMUST00000108789 5714 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Smarcd1Q61466 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Smarcd1Q61466 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Smarcd1Q61466 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Smarcd1Q61466 Krtap1-4-201ENSMUST00000100479 593 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
Smarcd1Q61466 Rbm4-203ENSMUST00000178615 1018 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Smarcd1Q61466 Gm27357-201ENSMUST00000183754 135 ntBASIC17.27■□□□□ 0.36
Smarcd1Q61466 Piga-208ENSMUST00000208697 947 ntTSL 5 BASIC17.27■□□□□ 0.36
Smarcd1Q61466 Ppp1r27-201ENSMUST00000026121 771 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Smarcd1Q61466 Etfb-201ENSMUST00000004729 893 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Smarcd1Q61466 Disp3-201ENSMUST00000047720 5282 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
Smarcd1Q61466 Dok5-201ENSMUST00000029075 1768 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Smarcd1Q61466 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
Smarcd1Q61466 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Smarcd1Q61466 Hspb6-201ENSMUST00000044048 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Smarcd1Q61466 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Smarcd1Q61466 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.35
Smarcd1Q61466 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.35
Smarcd1Q61466 Dok3-201ENSMUST00000047877 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Smarcd1Q61466 Gm15635-204ENSMUST00000208024 2539 ntBASIC17.26■□□□□ 0.35
Smarcd1Q61466 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Smarcd1Q61466 St8sia5-201ENSMUST00000075290 1841 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Smarcd1Q61466 Iqgap2-201ENSMUST00000068603 5771 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Smarcd1Q61466 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC17.26■□□□□ 0.35
Smarcd1Q61466 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
Smarcd1Q61466 Olfr129-201ENSMUST00000122318 993 ntBASIC17.26■□□□□ 0.35
Smarcd1Q61466 Gm15952-201ENSMUST00000122858 490 ntTSL 3 BASIC17.26■□□□□ 0.35
Smarcd1Q61466 Gm15295-201ENSMUST00000139874 488 ntTSL 5 BASIC17.26■□□□□ 0.35
Smarcd1Q61466 Lce1k-201ENSMUST00000179917 663 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
Smarcd1Q61466 Hist1h2bc-201ENSMUST00000018246 1156 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Smarcd1Q61466 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC17.26■□□□□ 0.35
Smarcd1Q61466 Slc35d2-204ENSMUST00000222168 472 ntTSL 3 BASIC17.26■□□□□ 0.35
Smarcd1Q61466 3110040N11Rik-201ENSMUST00000026092 887 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Smarcd1Q61466 Hist1h2ba-201ENSMUST00000052776 384 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
Smarcd1Q61466 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Smarcd1Q61466 Nmt2-203ENSMUST00000102989 2162 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
Smarcd1Q61466 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Smarcd1Q61466 Tmem176a-201ENSMUST00000101426 1540 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Smarcd1Q61466 Hand1-203ENSMUST00000160392 1806 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Smarcd1Q61466 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Smarcd1Q61466 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Smarcd1Q61466 Gm20517-202ENSMUST00000132397 4807 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Smarcd1Q61466 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC17.25■□□□□ 0.35
Smarcd1Q61466 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Smarcd1Q61466 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Smarcd1Q61466 Fcgrt-203ENSMUST00000210642 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Smarcd1Q61466 Gpsm3-201ENSMUST00000038244 1343 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Smarcd1Q61466 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Smarcd1Q61466 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Smarcd1Q61466 Psmg4-201ENSMUST00000124996 474 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Smarcd1Q61466 Blvrb-204ENSMUST00000133750 509 ntTSL 2 BASIC17.25■□□□□ 0.35
Smarcd1Q61466 Gm10052-201ENSMUST00000168019 960 ntBASIC17.25■□□□□ 0.35
Smarcd1Q61466 Mir3081-201ENSMUST00000175305 84 ntBASIC17.25■□□□□ 0.35
Smarcd1Q61466 Gm45631-201ENSMUST00000210318 1244 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Smarcd1Q61466 Gm7729-201ENSMUST00000050143 801 ntBASIC17.25■□□□□ 0.35
Smarcd1Q61466 Hist1h1a-201ENSMUST00000055770 741 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
Smarcd1Q61466 Cebpzos-201ENSMUST00000063817 753 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
Smarcd1Q61466 Gm15442-201ENSMUST00000117905 1527 ntBASIC17.25■□□□□ 0.35
Smarcd1Q61466 Enpp1-202ENSMUST00000105520 6777 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
Smarcd1Q61466 Atp5b-201ENSMUST00000026459 1916 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Smarcd1Q61466 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
Smarcd1Q61466 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Smarcd1Q61466 Pla2g2c-201ENSMUST00000030530 1618 ntAPPRIS P1 TSL 3 BASIC17.25■□□□□ 0.35
Smarcd1Q61466 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Smarcd1Q61466 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Smarcd1Q61466 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Smarcd1Q61466 Perp-201ENSMUST00000019998 1952 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Smarcd1Q61466 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Smarcd1Q61466 Zmynd19-201ENSMUST00000028350 3903 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Smarcd1Q61466 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Smarcd1Q61466 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
Smarcd1Q61466 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Smarcd1Q61466 Gm9103-201ENSMUST00000119371 405 ntBASIC17.24■□□□□ 0.35
Smarcd1Q61466 Celrr-203ENSMUST00000185678 937 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Smarcd1Q61466 Gm37280-201ENSMUST00000194583 375 ntTSL 3 BASIC17.24■□□□□ 0.35
Smarcd1Q61466 Gm26709-203ENSMUST00000223260 715 ntTSL 5 BASIC17.24■□□□□ 0.35
Smarcd1Q61466 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Smarcd1Q61466 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Smarcd1Q61466 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Smarcd1Q61466 Kcng4-202ENSMUST00000164382 1875 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
Smarcd1Q61466 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
Smarcd1Q61466 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Smarcd1Q61466 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Smarcd1Q61466 Wdr13-202ENSMUST00000115623 1749 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
Smarcd1Q61466 Otub1-202ENSMUST00000123594 1728 ntTSL 5 BASIC17.24■□□□□ 0.35
Smarcd1Q61466 Eda-203ENSMUST00000113776 5105 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Smarcd1Q61466 Ruvbl2-201ENSMUST00000107771 1834 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Smarcd1Q61466 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Smarcd1Q61466 Hsd17b1-201ENSMUST00000019445 1339 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Smarcd1Q61466 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
Smarcd1Q61466 Anks1b-219ENSMUST00000182600 1697 ntTSL 5 BASIC17.23■□□□□ 0.35
Smarcd1Q61466 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
Smarcd1Q61466 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Smarcd1Q61466 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 33.6 ms