Protein–RNA interactions for Protein: Q61451

Cd53, Leukocyte surface antigen CD53, mousemouse

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd53Q61451 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Cd53Q61451 Ndufs2-202ENSMUST00000111318 1545 ntTSL 5 BASIC15.29■□□□□ 0.04
Cd53Q61451 Bicdl1-201ENSMUST00000055408 3026 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Cd53Q61451 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Cd53Q61451 Chsy3-201ENSMUST00000080721 2931 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Cd53Q61451 Doc2g-201ENSMUST00000025806 1446 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Cd53Q61451 Lhx5-201ENSMUST00000031591 2689 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Cd53Q61451 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Cd53Q61451 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Cd53Q61451 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Cd53Q61451 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Cd53Q61451 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Cd53Q61451 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC15.29■□□□□ 0.04
Cd53Q61451 Gm43183-201ENSMUST00000200632 547 ntBASIC15.29■□□□□ 0.04
Cd53Q61451 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC15.29■□□□□ 0.04
Cd53Q61451 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Cd53Q61451 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Cd53Q61451 Ubap1-202ENSMUST00000108060 2514 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Cd53Q61451 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
Cd53Q61451 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
Cd53Q61451 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Cd53Q61451 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Cd53Q61451 Asph-210ENSMUST00000108337 2836 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Cd53Q61451 Ivns1abp-203ENSMUST00000111887 2783 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Cd53Q61451 Rflna-201ENSMUST00000036109 1681 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
Cd53Q61451 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
Cd53Q61451 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC15.28■□□□□ 0.04
Cd53Q61451 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Cd53Q61451 Umad1-202ENSMUST00000159335 2615 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Cd53Q61451 Bpnt1-202ENSMUST00000110965 1046 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Cd53Q61451 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC15.28■□□□□ 0.04
Cd53Q61451 Gm11539-201ENSMUST00000119837 557 ntBASIC15.28■□□□□ 0.04
Cd53Q61451 Gm13436-201ENSMUST00000120418 567 ntBASIC15.28■□□□□ 0.04
Cd53Q61451 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Cd53Q61451 Gm6728-201ENSMUST00000178117 1065 ntBASIC15.28■□□□□ 0.04
Cd53Q61451 Gm27741-201ENSMUST00000185060 237 ntBASIC15.28■□□□□ 0.04
Cd53Q61451 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC15.28■□□□□ 0.04
Cd53Q61451 Gm16042-201ENSMUST00000204813 1247 ntBASIC15.28■□□□□ 0.04
Cd53Q61451 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC15.28■□□□□ 0.04
Cd53Q61451 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Cd53Q61451 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
Cd53Q61451 Sh3rf3-205ENSMUST00000153031 5682 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Cd53Q61451 Atp5a1-201ENSMUST00000026495 2471 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Cd53Q61451 Comp-201ENSMUST00000003659 2416 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Cd53Q61451 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
Cd53Q61451 Elf2-202ENSMUST00000091144 2366 ntTSL 5 BASIC15.28■□□□□ 0.04
Cd53Q61451 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Cd53Q61451 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Cd53Q61451 Tfeb-204ENSMUST00000113288 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Cd53Q61451 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Cd53Q61451 Bnip2-201ENSMUST00000034754 2464 ntAPPRIS P4 TSL 1 (best) BASIC15.27■□□□□ 0.04
Cd53Q61451 Gm9821-201ENSMUST00000178895 1953 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
Cd53Q61451 Fbxl21-201ENSMUST00000045428 1965 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Cd53Q61451 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
Cd53Q61451 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Cd53Q61451 Akt2-214ENSMUST00000167435 2865 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Cd53Q61451 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Cd53Q61451 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Cd53Q61451 Taz-201ENSMUST00000069722 1851 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
Cd53Q61451 Knl1-201ENSMUST00000028799 5527 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Cd53Q61451 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Cd53Q61451 Prr5l-201ENSMUST00000043845 2290 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Cd53Q61451 Tspyl2-201ENSMUST00000044509 2696 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Cd53Q61451 Coro1a-202ENSMUST00000106364 1747 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Cd53Q61451 Tekt5-202ENSMUST00000115831 1277 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
Cd53Q61451 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Cd53Q61451 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC15.27■□□□□ 0.04
Cd53Q61451 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Cd53Q61451 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Cd53Q61451 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Cd53Q61451 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
Cd53Q61451 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Cd53Q61451 Itsn1-203ENSMUST00000095909 6103 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Cd53Q61451 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Cd53Q61451 Trim8-201ENSMUST00000026008 3230 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Cd53Q61451 Cep104-201ENSMUST00000047497 5151 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Cd53Q61451 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Cd53Q61451 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.03
Cd53Q61451 Hnrnpl-202ENSMUST00000172529 1898 ntTSL 5 BASIC15.27■□□□□ 0.03
Cd53Q61451 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC15.27■□□□□ 0.03
Cd53Q61451 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Cd53Q61451 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Cd53Q61451 Bend5-201ENSMUST00000030274 1826 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Cd53Q61451 Proca1-203ENSMUST00000108317 1359 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
Cd53Q61451 Txndc11-201ENSMUST00000038424 3095 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cd53Q61451 Wdr1-201ENSMUST00000005234 3089 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cd53Q61451 Grb7-201ENSMUST00000019456 2397 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cd53Q61451 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cd53Q61451 Spats2l-212ENSMUST00000170139 2315 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
Cd53Q61451 Caln1-203ENSMUST00000111288 9327 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cd53Q61451 Smim12-201ENSMUST00000142029 1022 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cd53Q61451 Gm7889-201ENSMUST00000185591 958 ntBASIC15.26■□□□□ 0.03
Cd53Q61451 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cd53Q61451 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
Cd53Q61451 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cd53Q61451 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC15.26■□□□□ 0.03
Cd53Q61451 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC15.26■□□□□ 0.03
Cd53Q61451 Plbd2-201ENSMUST00000031597 4208 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cd53Q61451 Kif5b-201ENSMUST00000025083 6032 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cd53Q61451 Susd1-201ENSMUST00000040166 3295 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 21.3 ms